Lenalidomide (hemihydrate)_SHP-77 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lenalidomide (hemihydrate) perturbation in SHP-77 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lenalidomide (hemihydrate)_SHP-77 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SMOC1 SPARC related modular calcium binding 1 0.0554372
MT2A metallothionein 2A 0.0553803
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0544552
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0520583
PDE10A phosphodiesterase 10A 0.0472843
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0356487
SNAP25 synaptosomal-associated protein, 25kDa 0.0322946
SLC38A2 solute carrier family 38, member 2 0.0312709
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0272545
TMEM255B transmembrane protein 255B 0.026786
BACE2 beta-site APP-cleaving enzyme 2 0.0254889
FNDC3A fibronectin type III domain containing 3A 0.025312
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0240434
SVIL supervillin 0.020982
N4BP2L2 NEDD4 binding protein 2-like 2 0.0201195
UBE2QL1 ubiquitin-conjugating enzyme E2Q family-like 1 0.0194816
MSN moesin 0.0187677
MCL1 myeloid cell leukemia 1 0.0185198
SIK2 salt-inducible kinase 2 0.0183758
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0183385
NSUN6 NOP2/Sun domain family, member 6 0.0177741
PDE8A phosphodiesterase 8A 0.0175914
LPP LIM domain containing preferred translocation partner in lipoma 0.0173818
FOXK1 forkhead box K1 0.0173558
CDH12 cadherin 12, type 2 (N-cadherin 2) 0.0173189
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0166701
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0165927
DOCK5 dedicator of cytokinesis 5 0.0162618
DGKD diacylglycerol kinase, delta 130kDa 0.0160121
MT1X metallothionein 1X 0.0157702
EGFR epidermal growth factor receptor 0.0152371
PUM3 pumilio RNA binding family member 3 0.0151954
ANKH ANKH inorganic pyrophosphate transport regulator 0.01485
RPS21 ribosomal protein S21 0.0145329
ELL2 elongation factor, RNA polymerase II, 2 0.0145315
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0145055
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.0142856
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0141399
WRN Werner syndrome, RecQ helicase-like 0.0139438
BMERB1 bMERB domain containing 1 0.0138743
LPGAT1 lysophosphatidylglycerol acyltransferase 1 0.0136436
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0136298
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0132431
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0130976
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0129398
FTL ferritin, light polypeptide 0.0128909
ANKRD36C ankyrin repeat domain 36C 0.0128888
IVNS1ABP influenza virus NS1A binding protein 0.0128029
ZCCHC2 zinc finger, CCHC domain containing 2 0.012716
MEIS2 Meis homeobox 2 0.0125633
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.0122689
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0119371
RICTOR RPTOR independent companion of MTOR, complex 2 0.0118201
RPL35A ribosomal protein L35a 0.011814
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 0.0113166
KLHL8 kelch-like family member 8 0.0112604
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0111369
SNX14 sorting nexin 14 0.0111237
CCNH cyclin H 0.0110867
WDR25 WD repeat domain 25 0.0109734
NANOS1 nanos homolog 1 (Drosophila) 0.0109682
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0109408
SMAD4 SMAD family member 4 0.0107346
PCGF5 polycomb group ring finger 5 0.0107158
RHOQ ras homolog family member Q 0.0106353
GIGYF2 GRB10 interacting GYF protein 2 0.0106313
SLC35F5 solute carrier family 35, member F5 0.0106057
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0105547
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0105544
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.0105242
FAM91A1 family with sequence similarity 91, member A1 0.01044
TRPA1 transient receptor potential cation channel, subfamily A, member 1 0.0104357
FBXL17 F-box and leucine-rich repeat protein 17 0.0104304
HDAC4 histone deacetylase 4 0.0104145
RPL5 ribosomal protein L5 0.0102831
LEMD3 LEM domain containing 3 0.0102469
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.010234
RNF144A ring finger protein 144A 0.0101177
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.00989541
AHR aryl hydrocarbon receptor 0.00982451
EFL1 elongation factor like GTPase 1 0.00979324
TNRC6C trinucleotide repeat containing 6C 0.00976036
RABEP1 rabaptin, RAB GTPase binding effector protein 1 0.00974215
BBS9 Bardet-Biedl syndrome 9 0.00972162
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.00970675
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.00955555
SRBD1 S1 RNA binding domain 1 0.00951458
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.00949769
SSH1 slingshot protein phosphatase 1 0.00942605
GPR107 G protein-coupled receptor 107 0.00933315
YY1AP1 YY1 associated protein 1 0.00924546
ANKRD27 ankyrin repeat domain 27 (VPS9 domain) 0.00924213
ATP6V0E1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 0.00922477
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 0.00920204
LIFR leukemia inhibitory factor receptor alpha 0.00917467
WLS wntless Wnt ligand secretion mediator 0.00903119
SGMS2 sphingomyelin synthase 2 0.0090264
FER fer (fps/fes related) tyrosine kinase 0.00901364
MSR1 macrophage scavenger receptor 1 0.0090077
RIGI RNA sensor RIG-I 0.00896247

decreased expression

Symbol Name Standardized Value
IGFBP5 insulin-like growth factor binding protein 5 -0.133163
PEG10 paternally expressed 10 -0.130937
PTMA prothymosin, alpha -0.12688
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.109344
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0966211
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0947518
NALF1 NALCN channel auxiliary factor 1 -0.0946623
GPC6 glypican 6 -0.0931176
MAP1B microtubule-associated protein 1B -0.0830262
SCG2 secretogranin II -0.0749444
CHGB chromogranin B -0.0736937
NKAIN2 Na+/K+ transporting ATPase interacting 2 -0.073275
CALCA calcitonin-related polypeptide alpha -0.0730016
NRG1 neuregulin 1 -0.0726516
RIMS2 regulating synaptic membrane exocytosis 2 -0.0723504
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 -0.0714131
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0709359
KCNB2 potassium channel, voltage gated Shab related subfamily B, member 2 -0.0675468
SYT1 synaptotagmin I -0.0674724
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0659469
ACTG1 actin gamma 1 -0.0644102
ESRRG estrogen-related receptor gamma -0.0612907
TMSB4X thymosin beta 4, X-linked -0.0543473
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit -0.0542709
TSHZ2 teashirt zinc finger homeobox 2 -0.0541189
ENO1 enolase 1, (alpha) -0.0531627
SMYD3 SET and MYND domain containing 3 -0.0490165
IGFBP2 insulin-like growth factor binding protein 2, 36kDa -0.0478303
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0467587
MACF1 microtubule-actin crosslinking factor 1 -0.0435855
DTNA dystrobrevin, alpha -0.0435758
RIT2 Ras-like without CAAX 2 -0.0429499
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0416001
ADGRL2 adhesion G protein-coupled receptor L2 -0.040431
H1-0 H1.0 linker histone -0.0395652
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0392435
PDIA6 protein disulfide isomerase family A, member 6 -0.036782
NFIA nuclear factor I/A -0.0365673
EPHA6 EPH receptor A6 -0.0362867
VGF VGF nerve growth factor inducible -0.0357611
TCF12 transcription factor 12 -0.0357065
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0349551
KCTD8 potassium channel tetramerization domain containing 8 -0.0349148
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0345985
KIF26B kinesin family member 26B -0.0341786
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0338737
NDRG1 N-myc downstream regulated 1 -0.0333296
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0332192
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0330414
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0328735
ADAR adenosine deaminase, RNA-specific -0.0326072
CPE carboxypeptidase E -0.0325764
MSI2 musashi RNA-binding protein 2 -0.0315083
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0310954
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0307972
GMDS GDP-mannose 4,6-dehydratase -0.0301777
NCOR1 nuclear receptor corepressor 1 -0.0299249
CHD7 chromodomain helicase DNA binding protein 7 -0.0295699
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0293824
RPL26 ribosomal protein L26 -0.0293238
ATP5F1B ATP synthase F1 subunit beta -0.0293048
NCAM1 neural cell adhesion molecule 1 -0.029185
CANX calnexin -0.0291422
NELL1 NEL-like 1 (chicken) -0.0291382
WWOX WW domain containing oxidoreductase -0.0289869
GNAS GNAS complex locus -0.0289036
RALYL RALY RNA binding protein-like -0.0287949
SSR2 signal sequence receptor, beta (translocon-associated protein beta) -0.028774
PDE4B phosphodiesterase 4B, cAMP-specific -0.028753
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0287489
POTEF POTE ankyrin domain family, member F -0.0285994
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit -0.0284693
YBX1 Y box binding protein 1 -0.0281159
SERGEF secretion regulating guanine nucleotide exchange factor -0.0280556
S100A9 S100 calcium binding protein A9 -0.0276162
GNG4 guanine nucleotide binding protein (G protein), gamma 4 -0.0275611
BCL2 B-cell CLL/lymphoma 2 -0.0267003
CENPF centromere protein F, 350/400kDa -0.0266175
JAM3 junctional adhesion molecule 3 -0.0263307
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0261381
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0259062
TPM3 tropomyosin 3 -0.0258577
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase -0.0257601
GPC5 glypican 5 -0.025612
MTDH metadherin -0.0255194
RORA RAR-related orphan receptor A -0.0254045
PFN1 profilin 1 -0.0253474
UBB ubiquitin B -0.0251424
CALR calreticulin -0.0250513
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0247064
SINHCAF SIN3-HDAC complex associated factor -0.0246867
KLHL29 kelch-like family member 29 -0.0246498
MKI67 marker of proliferation Ki-67 -0.0246475
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0245823
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0245554
WDR45B WD repeat domain 45B -0.0243283
UCMA upper zone of growth plate and cartilage matrix associated -0.0239204
SRP72 signal recognition particle 72kDa -0.0238708
SLC35F4 solute carrier family 35, member F4 -0.0235988
ARB2A ARB2 cotranscriptional regulator A -0.0233843