Lenalidomide (hemihydrate)_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lenalidomide (hemihydrate) perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lenalidomide (hemihydrate)_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.107481
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0787933
RPLP1 ribosomal protein, large, P1 0.0558128
GOLGA4 golgin A4 0.0525081
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0492644
EIF1 eukaryotic translation initiation factor 1 0.0489946
ESYT2 extended synaptotagmin-like protein 2 0.0482133
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0428483
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.041017
TBC1D5 TBC1 domain family, member 5 0.0404322
RPS12 ribosomal protein S12 0.0398454
RPL37A ribosomal protein L37a 0.0392811
WWOX WW domain containing oxidoreductase 0.0386791
AVL9 AVL9 homolog (S. cerevisiase) 0.0380432
ZBTB20 zinc finger and BTB domain containing 20 0.035978
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0359551
JMJD1C jumonji domain containing 1C 0.0351445
KPNB1 karyopherin (importin) beta 1 0.035131
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0347935
NKD1 naked cuticle homolog 1 (Drosophila) 0.0340083
KDM7A lysine (K)-specific demethylase 7A 0.0333013
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0332189
RPL35A ribosomal protein L35a 0.0332163
ANKRD12 ankyrin repeat domain 12 0.0324228
SMYD3 SET and MYND domain containing 3 0.0324076
RAD51B RAD51 paralog B 0.0322808
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0320823
ZNF638 zinc finger protein 638 0.030958
TMEM41B transmembrane protein 41B 0.0291082
SDK1 sidekick cell adhesion molecule 1 0.0286863
PDIA3 protein disulfide isomerase family A, member 3 0.0285467
PIAS1 protein inhibitor of activated STAT, 1 0.0284542
MYO1D myosin ID 0.0283416
SBF2 SET binding factor 2 0.0280553
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0280443
SLK STE20-like kinase 0.0279854
PGK1 phosphoglycerate kinase 1 0.0279145
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0278142
CTNND1 catenin (cadherin-associated protein), delta 1 0.0278108
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0274073
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0273749
PHIP pleckstrin homology domain interacting protein 0.0273464
PRELID2 PRELI domain containing 2 0.0273091
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0272675
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0272383
RPS8 ribosomal protein S8 0.0269482
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0268779
PKM pyruvate kinase, muscle 0.0265673
KMT2C lysine (K)-specific methyltransferase 2C 0.0264392
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.026263
SET SET nuclear proto-oncogene 0.0260719
RPS27 ribosomal protein S27 0.0256455
RPS20 ribosomal protein S20 0.0256236
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0253568
ZCCHC7 zinc finger, CCHC domain containing 7 0.0252463
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0252226
TPT1 tumor protein, translationally-controlled 1 0.0251959
FHIT fragile histidine triad 0.0249988
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0249119
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0248208
CERS6 ceramide synthase 6 0.0245868
ZMYND8 zinc finger, MYND-type containing 8 0.0244175
RPS17 ribosomal protein S17 0.0243509
ABHD12 abhydrolase domain containing 12 0.0243402
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.024205
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0238832
NHSL1 NHS-like 1 0.0237294
PCLO piccolo presynaptic cytomatrix protein 0.0234591
OSBPL10 oxysterol binding protein-like 10 0.0233386
ITCH itchy E3 ubiquitin protein ligase 0.0232975
EXOC6B exocyst complex component 6B 0.023256
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.023126
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase 0.0230457
SMC4 structural maintenance of chromosomes 4 0.0228857
DSPP dentin sialophosphoprotein 0.0228835
GPHN gephyrin 0.0226899
BTBD9 BTB (POZ) domain containing 9 0.0223363
SRBD1 S1 RNA binding domain 1 0.0222611
EXT1 exostosin glycosyltransferase 1 0.0220665
MSI2 musashi RNA-binding protein 2 0.0220591
RAB6A RAB6A, member RAS oncogene family 0.0218336
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0217143
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0216889
PKP4 plakophilin 4 0.021644
FBXL20 F-box and leucine-rich repeat protein 20 0.021608
MACC1 metastasis associated in colon cancer 1 0.0215693
ANO10 anoctamin 10 0.0214694
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0214578
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0214515
BCAS3 breast carcinoma amplified sequence 3 0.0211198
CUX1 cut-like homeobox 1 0.0207552
PARD3B par-3 family cell polarity regulator beta 0.0206905
ADAM17 ADAM metallopeptidase domain 17 0.0206381
GPATCH8 G patch domain containing 8 0.0205387
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0204932
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0202809
RPS13 ribosomal protein S13 0.020247
SYK spleen tyrosine kinase 0.0202458
RPLP0 ribosomal protein, large, P0 0.019995
DOCK4 dedicator of cytokinesis 4 0.0199777

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.104792
EZR ezrin -0.104693
KRT8 keratin 8, type II -0.0940298
KRT18 keratin 18, type I -0.0754702
IFRD1 interferon-related developmental regulator 1 -0.0752954
ANXA2 annexin A2 -0.0596878
TMSB10 thymosin beta 10 -0.0555017
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0540447
RBM39 RNA binding motif protein 39 -0.0535537
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0526309
GNAS GNAS complex locus -0.0513407
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0510525
BZW2 basic leucine zipper and W2 domains 2 -0.0484808
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0479031
ACTN4 actinin, alpha 4 -0.0468704
CST3 cystatin C -0.0459043
GLS2 glutaminase 2 (liver, mitochondrial) -0.0452304
EGR1 early growth response 1 -0.0450613
KRT20 keratin 20, type I -0.0442399
RAB7A RAB7A, member RAS oncogene family -0.0424347
TSC22D2 TSC22 domain family, member 2 -0.0408675
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0408546
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0387103
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0374918
NDRG1 N-myc downstream regulated 1 -0.0370719
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0366951
HMGA1 high mobility group AT-hook 1 -0.0365962
CEMIP2 cell migration inducing hyaluronidase 2 -0.0360054
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0359091
EDN1 endothelin 1 -0.0338692
POTEF POTE ankyrin domain family, member F -0.0336801
UBC ubiquitin C -0.0335453
FTH1 ferritin, heavy polypeptide 1 -0.0333059
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0332987
RYBP RING1 and YY1 binding protein -0.033267
INTS6 integrator complex subunit 6 -0.0320162
SDC4 syndecan 4 -0.0320067
TRA2A transformer 2 alpha homolog (Drosophila) -0.0318679
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0313473
GSTP1 glutathione S-transferase pi 1 -0.0312894
TOP1 topoisomerase (DNA) I -0.0312721
IRS2 insulin receptor substrate 2 -0.0311596
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0309969
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0308646
FTL ferritin, light polypeptide -0.0308014
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0300695
CCNL1 cyclin L1 -0.0298669
CCND1 cyclin D1 -0.0298515
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0296538
LMNA lamin A/C -0.0293716
FLNA filamin A, alpha -0.0292272
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0290037
DLG1 discs, large homolog 1 (Drosophila) -0.0282942
EIF4A1 eukaryotic translation initiation factor 4A1 -0.027742
BCLAF1 BCL2-associated transcription factor 1 -0.0271775
NABP1 nucleic acid binding protein 1 -0.0270621
S100A6 S100 calcium binding protein A6 -0.0269765
PPARD peroxisome proliferator-activated receptor delta -0.0264643
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0259004
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0257657
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0257358
GOLGB1 golgin B1 -0.0253504
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0253495
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B -0.0253242
HBP1 HMG-box transcription factor 1 -0.0252564
ZNF207 zinc finger protein 207 -0.0251587
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0244979
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain -0.0242481
RND3 Rho family GTPase 3 -0.0238183
UBE2C ubiquitin-conjugating enzyme E2C -0.0234936
VMP1 vacuole membrane protein 1 -0.0231953
EWSR1 EWS RNA-binding protein 1 -0.0231262
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0230159
EMP1 epithelial membrane protein 1 -0.0229785
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0228338
FNDC3B fibronectin type III domain containing 3B -0.0227722
S100A10 S100 calcium binding protein A10 -0.022753
RAB1A RAB1A, member RAS oncogene family -0.0226897
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0222502
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0221719
TRA2B transformer 2 beta homolog (Drosophila) -0.0221535
RUNX1 runt-related transcription factor 1 -0.0220815
SACK1D scaffolding CK1 anchoring protein D -0.0218757
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0218566
CLDN4 claudin 4 -0.0216802
FOSL1 FOS-like antigen 1 -0.0216237
FAM107B family with sequence similarity 107, member B -0.0215681
TIPARP TCDD-inducible poly(ADP-ribose) polymerase -0.0214007
MXD1 MAX dimerization protein 1 -0.0213955
COBL cordon-bleu WH2 repeat protein -0.0213171
RRBP1 ribosome binding protein 1 -0.0212606
PLK2 polo-like kinase 2 -0.0207978
JUP junction plakoglobin -0.0206916
S100A11 S100 calcium binding protein A11 -0.0206845
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0206023
H1-0 H1.0 linker histone -0.020536
LMO7 LIM domain 7 -0.0204415
ZNF217 zinc finger protein 217 -0.0204127
IFITM1 interferon induced transmembrane protein 1 -0.0203432
MYOF myoferlin -0.0203246