Lidocaine (hydrochloride)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 0.227799
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.185643
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.152867
HMGA2 high mobility group AT-hook 2 0.140941
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.132448
PDE4D phosphodiesterase 4D, cAMP-specific 0.125576
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.122342
CELF2 CUGBP, Elav-like family member 2 0.103477
PCDH7 protocadherin 7 0.103048
DST dystonin 0.0985852
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0907656
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0831375
BIRC3 baculoviral IAP repeat containing 3 0.0761012
SLC38A2 solute carrier family 38, member 2 0.0750285
ACTG1 actin gamma 1 0.0750261
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0730293
TENM3 teneurin transmembrane protein 3 0.0699579
MKI67 marker of proliferation Ki-67 0.0688351
ZSWIM6 zinc finger, SWIM-type containing 6 0.0678112
CCN2 cellular communication network factor 2 0.0672875
SMC4 structural maintenance of chromosomes 4 0.066574
YAP1 Yes-associated protein 1 0.0663978
MMP12 matrix metallopeptidase 12 0.0640662
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0632693
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0612378
RRM2 ribonucleotide reductase M2 0.0598346
RAB7A RAB7A, member RAS oncogene family 0.0597575
ADIPOR2 adiponectin receptor 2 0.0579596
ANXA1 annexin A1 0.0577025
ADGRG6 adhesion G protein-coupled receptor G6 0.057211
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0565183
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0548366
NHSL1 NHS-like 1 0.0548211
NCAPD2 non-SMC condensin I complex, subunit D2 0.0519784
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0502585
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0489559
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0477127
CLTC clathrin, heavy chain (Hc) 0.04765
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0470778
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0467695
CMIP c-Maf inducing protein 0.0448856
CENPF centromere protein F, 350/400kDa 0.0445523
RIMS2 regulating synaptic membrane exocytosis 2 0.0443944
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0430326
RASAL2 RAS protein activator like 2 0.0426751
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0408339
DLC1 DLC1 Rho GTPase activating protein 0.0402408
CDK6 cyclin-dependent kinase 6 0.0391849
LOC112694756 uncharaterized LOC112694756 0.039055
HSPA8 heat shock 70kDa protein 8 0.0389179
STIP1 stress-induced phosphoprotein 1 0.0389136
VMP1 vacuole membrane protein 1 0.038171
LMO7 LIM domain 7 0.0375126
RPL3 ribosomal protein L3 0.0372964
CALR calreticulin 0.0364841
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0362141
MSRB3 methionine sulfoxide reductase B3 0.0361997
EDARADD EDAR-associated death domain 0.0361151
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0360995
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0356081
USP34 ubiquitin specific peptidase 34 0.0355874
PDGFC platelet derived growth factor C 0.0354502
TUBB tubulin, beta class I 0.0354345
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0350021
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0348045
HSPA4 heat shock 70kDa protein 4 0.0347802
MTAP methylthioadenosine phosphorylase 0.0347393
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0346792
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0342641
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0341947
TPI1 triosephosphate isomerase 1 0.0341535
FUS FUS RNA binding protein 0.0338681
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0337657
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0333903
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.033383
GJA1 gap junction protein, alpha 1, 43kDa 0.0331679
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0327365
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0326658
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.032243
ANKRD12 ankyrin repeat domain 12 0.0322112
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.032199
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 0.0321416
DIAPH3 diaphanous-related formin 3 0.0321081
ANKRD28 ankyrin repeat domain 28 0.0321065
ECT2 epithelial cell transforming 2 0.0320632
IPO7 importin 7 0.0316267
ZNF804A zinc finger protein 804A 0.0315198
WWOX WW domain containing oxidoreductase 0.0312763
UHMK1 U2AF homology motif (UHM) kinase 1 0.0300939
CCND1 cyclin D1 0.0300903
SPAG9 sperm associated antigen 9 0.0299064
NSD2 nuclear receptor binding SET domain protein 2 0.0297869
ASXL2 additional sex combs like transcriptional regulator 2 0.0293036
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.029082
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0290628
AFF4 AF4/FMR2 family, member 4 0.0290389
BRD2 bromodomain containing 2 0.0290144
AREG amphiregulin 0.0289677
ERRFI1 ERBB receptor feedback inhibitor 1 0.0286858
TPX2 TPX2, microtubule-associated 0.0284071

decreased expression

Symbol Name Standardized Value
RPS27A ribosomal protein S27a -0.0486136
PTMA prothymosin, alpha -0.0370187
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0302783
VIM vimentin -0.0267612
ZBTB20 zinc finger and BTB domain containing 20 -0.0255914
TMSB10 thymosin beta 10 -0.0245399
EHBP1 EH domain binding protein 1 -0.0240165
UBC ubiquitin C -0.0227537
RPS8 ribosomal protein S8 -0.0226591
YEATS2 YEATS domain containing 2 -0.0222225
SESN2 sestrin 2 -0.0218494
KMT2E lysine (K)-specific methyltransferase 2E -0.0188241
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0180268
ZNF292 zinc finger protein 292 -0.0179836
KLHL24 kelch-like family member 24 -0.0166532
RPS19 ribosomal protein S19 -0.0161027
RPS13 ribosomal protein S13 -0.0160323
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0159058
KDM3A lysine (K)-specific demethylase 3A -0.0157939
DCAF6 DDB1 and CUL4 associated factor 6 -0.0155998
RPL9 ribosomal protein L9 -0.0155495
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0154905
AFF1 AF4/FMR2 family, member 1 -0.0154812
RBM27 RNA binding motif protein 27 -0.0154594
KDM5B lysine (K)-specific demethylase 5B -0.0150658
S100A6 S100 calcium binding protein A6 -0.0145713
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like -0.0144839
RPL23 ribosomal protein L23 -0.0138698
PREPL prolyl endopeptidase-like -0.0138614
ANK2 ankyrin 2, neuronal -0.0137477
RPL31 ribosomal protein L31 -0.0136301
NCK1 NCK adaptor protein 1 -0.0134225
PHF3 PHD finger protein 3 -0.0130478
SNX14 sorting nexin 14 -0.0129796
RPS3 ribosomal protein S3 -0.0127797
SLC38A1 solute carrier family 38, member 1 -0.0126764
PLPP1 phospholipid phosphatase 1 -0.0125367
FTL ferritin, light polypeptide -0.0124572
AKAP13 A kinase (PRKA) anchor protein 13 -0.0124506
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -0.0123921
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0122253
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0121313
WWTR1 WW domain containing transcription regulator 1 -0.0121226
CAMKMT calmodulin-lysine N-methyltransferase -0.0119651
TRPS1 trichorhinophalangeal syndrome I -0.0117829
RAB30 RAB30, member RAS oncogene family -0.0116919
LCORL ligand dependent nuclear receptor corepressor-like -0.0115824
CACUL1 CDK2-associated, cullin domain 1 -0.0115653
MON2 MON2 homolog (S. cerevisiae) -0.0114942
RAB1A RAB1A, member RAS oncogene family -0.0114267
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0113701
ADAM9 ADAM metallopeptidase domain 9 -0.0113202
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0110257
PDIA5 protein disulfide isomerase family A, member 5 -0.0110078
ZFC3H1 zinc finger, C3H1-type containing -0.0109217
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0108316
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0106241
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0105887
PNISR PNN-interacting serine/arginine-rich protein -0.0104458
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.010427
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0103833
VGLL4 vestigial-like family member 4 -0.0103441
COX8A cytochrome c oxidase subunit VIIIA (ubiquitous) -0.0103137
NUP54 nucleoporin 54kDa -0.0102614
YY1AP1 YY1 associated protein 1 -0.0102513
CFDP1 craniofacial development protein 1 -0.0102248
REST RE1-silencing transcription factor -0.0101302
FBXO11 F-box protein 11 -0.0100897
RPL37A ribosomal protein L37a -0.010039
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0100343
CYFIP2 cytoplasmic FMR1 interacting protein 2 -0.00995355
TRIM33 tripartite motif containing 33 -0.00994443
RYK receptor-like tyrosine kinase -0.00994101
NKTR natural killer cell triggering receptor -0.00986489
BRWD3 bromodomain and WD repeat domain containing 3 -0.00986153
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.00973207
CNRIP1 cannabinoid receptor interacting protein 1 -0.00970515
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B -0.00970293
NDRG1 N-myc downstream regulated 1 -0.00968729
RPL30 ribosomal protein L30 -0.00968036
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.00967665
SPRED2 sprouty-related, EVH1 domain containing 2 -0.00966871
RNF130 ring finger protein 130 -0.00966011
PTEN phosphatase and tensin homolog -0.00963932
ARRDC3 arrestin domain containing 3 -0.00958258
TLK1 tousled-like kinase 1 -0.00954336
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B -0.0095357
RPL12 ribosomal protein L12 -0.00946515
PAWR PRKC, apoptosis, WT1, regulator -0.0093626
LARP1B La ribonucleoprotein domain family, member 1B -0.00921997
LMAN1 lectin, mannose-binding, 1 -0.00921298
KDM4C lysine (K)-specific demethylase 4C -0.00916624
RPS16 ribosomal protein S16 -0.00914332
RPS12 ribosomal protein S12 -0.00912936
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.00903937
RPL37 ribosomal protein L37 -0.00903253
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.00902801
MED23 mediator complex subunit 23 -0.00899505
BBS9 Bardet-Biedl syndrome 9 -0.00896469
ZFPM2 zinc finger protein, FOG family member 2 -0.0089347