Lidocaine (hydrochloride)_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.157788
EXT1 exostosin glycosyltransferase 1 0.129043
ASPH aspartate beta-hydroxylase 0.115935
SMAD3 SMAD family member 3 0.0983932
CD44 CD44 molecule (Indian blood group) 0.0905718
GPC6 glypican 6 0.0888273
FNDC3B fibronectin type III domain containing 3B 0.0737618
RNF213 ring finger protein 213 0.0693757
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0602184
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0600275
GLIS3 GLIS family zinc finger 3 0.0579658
SEPTIN9 septin 9 0.0571372
NAV2 neuron navigator 2 0.0551747
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0545474
TXNRD1 thioredoxin reductase 1 0.0530457
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0526384
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0517869
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0516207
KYNU kynureninase 0.0508237
LOC112694756 uncharaterized LOC112694756 0.0477665
APOL1 apolipoprotein L, 1 0.0471299
DOCK5 dedicator of cytokinesis 5 0.0462463
TRIO trio Rho guanine nucleotide exchange factor 0.0458649
PBX1 pre-B-cell leukemia homeobox 1 0.0445993
PLEC plectin 0.0427497
NRIP1 nuclear receptor interacting protein 1 0.0426304
NRP2 neuropilin 2 0.0423522
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0419338
MSN moesin 0.0387077
SHB Src homology 2 domain containing adaptor protein B 0.0379066
PDLIM5 PDZ and LIM domain 5 0.037774
FAT1 FAT atypical cadherin 1 0.0373099
TNIP1 TNFAIP3 interacting protein 1 0.037186
FRMD4A FERM domain containing 4A 0.0359555
VCL vinculin 0.0359397
COL4A2 collagen, type IV, alpha 2 0.0355548
APP amyloid beta (A4) precursor protein 0.0349542
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0349068
EGFR epidermal growth factor receptor 0.034721
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0337224
TSHZ2 teashirt zinc finger homeobox 2 0.0330905
CA12 carbonic anhydrase XII 0.0326572
OSMR oncostatin M receptor 0.032297
MX1 MX dynamin-like GTPase 1 0.0322485
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0320815
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0320043
RPL3 ribosomal protein L3 0.0314103
SAMD4A sterile alpha motif domain containing 4A 0.0313641
RRM2 ribonucleotide reductase M2 0.0310019
HPS3 Hermansky-Pudlak syndrome 3 0.0304142
CMIP c-Maf inducing protein 0.0301225
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0297908
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0295643
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0294227
JAK1 Janus kinase 1 0.0293422
AFF1 AF4/FMR2 family, member 1 0.0290592
ADAR adenosine deaminase, RNA-specific 0.0289378
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0289354
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0288889
EXOC4 exocyst complex component 4 0.0286382
ACTN4 actinin, alpha 4 0.0280172
LPP LIM domain containing preferred translocation partner in lipoma 0.0279055
ZSWIM6 zinc finger, SWIM-type containing 6 0.027821
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.027409
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0269332
FLNB filamin B, beta 0.0267657
FLNA filamin A, alpha 0.0263902
MYOF myoferlin 0.0262308
TGM2 transglutaminase 2 0.0261876
EEF2 eukaryotic translation elongation factor 2 0.0261253
HDAC9 histone deacetylase 9 0.0259006
RPS4X ribosomal protein S4, X-linked 0.0257792
PDE4D phosphodiesterase 4D, cAMP-specific 0.0257621
EIF4H eukaryotic translation initiation factor 4H 0.0251752
NRP1 neuropilin 1 0.0251287
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.025048
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0248905
EFNA5 ephrin-A5 0.0248747
AHNAK AHNAK nucleoprotein 0.0247299
MYO1E myosin IE 0.0247255
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0247251
PTPRG protein tyrosine phosphatase, receptor type, G 0.0246504
BPTF bromodomain PHD finger transcription factor 0.0244791
INTS6 integrator complex subunit 6 0.0241115
CTBP2 C-terminal binding protein 2 0.0240678
CSNK1A1 casein kinase 1, alpha 1 0.023936
MRTFA myocardin related transcription factor A 0.0236749
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0236052
RUNX1 runt-related transcription factor 1 0.0235651
LOXL2 lysyl oxidase-like 2 0.0233962
C1S complement component 1, s subcomponent 0.0231073
NFIB nuclear factor I/B 0.0230471
ARRDC3 arrestin domain containing 3 0.0230193
CUX1 cut-like homeobox 1 0.0225791
CENPF centromere protein F, 350/400kDa 0.0224266
MPRIP myosin phosphatase Rho interacting protein 0.0222538
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0221836
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0220811
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0220136
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0219873

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.251255
VIM vimentin -0.109237
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0834015
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0801543
TMSB10 thymosin beta 10 -0.0753872
RPL35A ribosomal protein L35a -0.059083
FTH1 ferritin, heavy polypeptide 1 -0.0567359
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0516456
FTL ferritin, light polypeptide -0.0471303
NDRG1 N-myc downstream regulated 1 -0.0439401
RAB1A RAB1A, member RAS oncogene family -0.0428222
CP ceruloplasmin (ferroxidase) -0.0414915
KPNB1 karyopherin (importin) beta 1 -0.0381696
PLIN2 perilipin 2 -0.03772
PTMA prothymosin, alpha -0.0357234
RPS6 ribosomal protein S6 -0.0350177
CADM1 cell adhesion molecule 1 -0.0332432
LMAN1 lectin, mannose-binding, 1 -0.0330732
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0310858
HMGB1 high mobility group box 1 -0.0309899
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) -0.0308013
HSPB1 heat shock 27kDa protein 1 -0.0307025
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0289095
GOLGA4 golgin A4 -0.0285585
CANX calnexin -0.0285141
GDF15 growth differentiation factor 15 -0.0284483
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0268929
EPS8 epidermal growth factor receptor pathway substrate 8 -0.025881
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0254841
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0241494
ANXA5 annexin A5 -0.0239722
PRRC2C proline-rich coiled-coil 2C -0.0239202
TFPI2 tissue factor pathway inhibitor 2 -0.0235504
KMT2E lysine (K)-specific methyltransferase 2E -0.0234493
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0231834
SDCBP syndecan binding protein (syntenin) -0.0228007
POTEF POTE ankyrin domain family, member F -0.0219921
HMGA1 high mobility group AT-hook 1 -0.0218448
TMEM263 transmembrane protein 263 -0.0216078
RPL34 ribosomal protein L34 -0.0215134
TPM4 tropomyosin 4 -0.0214654
NOP58 NOP58 ribonucleoprotein -0.021396
USP3 ubiquitin specific peptidase 3 -0.0213803
INSIG1 insulin induced gene 1 -0.0213394
GARS1 glycyl-tRNA synthetase 1 -0.0212909
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0212159
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0206974
RND3 Rho family GTPase 3 -0.0206665
PDIA3 protein disulfide isomerase family A, member 3 -0.0203624
RAB2A RAB2A, member RAS oncogene family -0.020307
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0200467
TFG TRK-fused gene -0.0200299
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0196142
MRPS6 mitochondrial ribosomal protein S6 -0.0194511
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0194431
RAB7A RAB7A, member RAS oncogene family -0.0190424
SCFD2 sec1 family domain containing 2 -0.0187754
SEPTIN7 septin 7 -0.0187043
MARCHF6 membrane associated ring-CH-type finger 6 -0.0185951
PFN1 profilin 1 -0.0184827
LAMB3 laminin, beta 3 -0.0184597
ERLEC1 endoplasmic reticulum lectin 1 -0.0184469
HBP1 HMG-box transcription factor 1 -0.0182479
GGNBP2 gametogenetin binding protein 2 -0.0182346
RIPK2 receptor-interacting serine-threonine kinase 2 -0.0182131
RBM39 RNA binding motif protein 39 -0.0180883
EIF1 eukaryotic translation initiation factor 1 -0.0180214
S100A6 S100 calcium binding protein A6 -0.0178609
TRAM1 translocation associated membrane protein 1 -0.0176214
IFRD1 interferon-related developmental regulator 1 -0.0175107
ATP13A3 ATPase type 13A3 -0.0174464
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0173754
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0172677
MATR3 matrin 3 -0.0172642
UFM1 ubiquitin-fold modifier 1 -0.0172096
RPS19 ribosomal protein S19 -0.0171491
LTN1 listerin E3 ubiquitin protein ligase 1 -0.0171035
DENND4C DENN/MADD domain containing 4C -0.0170303
RPLP1 ribosomal protein, large, P1 -0.0169072
PRRC1 proline-rich coiled-coil 1 -0.0168491
FBXO32 F-box protein 32 -0.0167406
SPAG9 sperm associated antigen 9 -0.016733
RB1CC1 RB1-inducible coiled-coil 1 -0.0167188
TPM1 tropomyosin 1 (alpha) -0.0161774
ADM adrenomedullin -0.0161652
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0161076
GNAS GNAS complex locus -0.0160999
FN1 fibronectin 1 -0.0158716
PTBP3 polypyrimidine tract binding protein 3 -0.0158323
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0158109
PDIA6 protein disulfide isomerase family A, member 6 -0.0156373
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 -0.0154881
MORF4L2 mortality factor 4 like 2 -0.0152562
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0150486
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0149123
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0149066
JMJD1C jumonji domain containing 1C -0.0148678
WDR43 WD repeat domain 43 -0.014854
MTDH metadherin -0.014805
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0146217