Lidocaine (hydrochloride)_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LOC112694756 uncharaterized LOC112694756 0.158617
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.107804
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.105413
VGF VGF nerve growth factor inducible 0.0936983
DST dystonin 0.0919092
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0817086
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0770249
MACROD2 MACRO domain containing 2 0.0698444
EXOC4 exocyst complex component 4 0.0635623
RNF213 ring finger protein 213 0.0629915
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.058865
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0570244
NAV1 neuron navigator 1 0.0559022
PLEC plectin 0.0534685
MYH9 myosin, heavy chain 9, non-muscle 0.0528637
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0509918
EEF2 eukaryotic translation elongation factor 2 0.0503966
SAMD4A sterile alpha motif domain containing 4A 0.0487391
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0478391
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0471267
CABIN1 calcineurin binding protein 1 0.0459236
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0442366
FLNA filamin A, alpha 0.0440531
AHNAK AHNAK nucleoprotein 0.0434713
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0429128
SETBP1 SET binding protein 1 0.0423655
TSC22D1 TSC22 domain family, member 1 0.04223
RPL3 ribosomal protein L3 0.0419724
ACTN1 actinin, alpha 1 0.041833
LMNA lamin A/C 0.0414677
IGF1R insulin-like growth factor 1 receptor 0.0412569
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0408843
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0408783
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.0406515
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0394975
PKM pyruvate kinase, muscle 0.039305
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0392586
MACF1 microtubule-actin crosslinking factor 1 0.0388785
TNIK TRAF2 and NCK interacting kinase 0.0387788
EIF4H eukaryotic translation initiation factor 4H 0.0386705
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0386678
FLNB filamin B, beta 0.0385345
APLP2 amyloid beta (A4) precursor-like protein 2 0.038187
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0376762
ACTN4 actinin, alpha 4 0.0373038
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0370852
MT2A metallothionein 2A 0.036595
PDIA4 protein disulfide isomerase family A, member 4 0.0363321
ATP11A ATPase, class VI, type 11A 0.035974
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0355193
SND1 staphylococcal nuclease and tudor domain containing 1 0.0351276
ESYT2 extended synaptotagmin-like protein 2 0.0351253
UBASH3B ubiquitin associated and SH3 domain containing B 0.0350756
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0344407
NRP2 neuropilin 2 0.0344272
SEPTIN9 septin 9 0.0341028
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0339931
BRD2 bromodomain containing 2 0.0339795
CD44 CD44 molecule (Indian blood group) 0.0339119
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0332082
APP amyloid beta (A4) precursor protein 0.0329633
CHSY1 chondroitin sulfate synthase 1 0.032961
UTRN utrophin 0.0325883
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0316367
GAS7 growth arrest-specific 7 0.0312066
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0310749
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0309138
LRMDA leucine rich melanocyte differentiation associated 0.0308963
ARRDC3 arrestin domain containing 3 0.0304157
LAMB1 laminin, beta 1 0.0301119
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0294438
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0292835
ATXN1 ataxin 1 0.029258
AFAP1 actin filament associated protein 1 0.0288156
MSN moesin 0.0286858
SMYD3 SET and MYND domain containing 3 0.0286518
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0286268
CSNK1A1 casein kinase 1, alpha 1 0.0285734
SMAD3 SMAD family member 3 0.0284148
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0281563
DDIT4 DNA-damage-inducible transcript 4 0.0280567
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0277168
TMEM178B transmembrane protein 178B 0.0275489
GSN gelsolin 0.027304
WWOX WW domain containing oxidoreductase 0.0272347
PDE4D phosphodiesterase 4D, cAMP-specific 0.0271998
GMDS GDP-mannose 4,6-dehydratase 0.0268091
RHBDF2 rhomboid 5 homolog 2 (Drosophila) 0.0267412
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.026649
ZC3H11A zinc finger CCCH-type containing 11A 0.0266246
TRIO trio Rho guanine nucleotide exchange factor 0.0265506
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0264023
UHMK1 U2AF homology motif (UHM) kinase 1 0.0263748
MCL1 myeloid cell leukemia 1 0.0254197
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0253568
FRMD4A FERM domain containing 4A 0.0252381
NPAS2 neuronal PAS domain protein 2 0.0250614
LEF1 lymphoid enhancer-binding factor 1 0.0250345
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.024628
FBXO7 F-box protein 7 0.0245962

decreased expression

Symbol Name Standardized Value
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0966688
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0947293
FN1 fibronectin 1 -0.0937237
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0832535
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0819544
GDF15 growth differentiation factor 15 -0.0705764
TMEM123 transmembrane protein 123 -0.0650505
TMSB10 thymosin beta 10 -0.0564714
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.047083
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0469497
PTMA prothymosin, alpha -0.0466537
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0437916
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0411227
IGFBP5 insulin-like growth factor binding protein 5 -0.0405593
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0386916
ZNF292 zinc finger protein 292 -0.03794
ITGB8 integrin, beta 8 -0.0376648
PHF21A PHD finger protein 21A -0.0350069
CANX calnexin -0.0341238
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0330059
IGFBP3 insulin-like growth factor binding protein 3 -0.0317842
KMT2E lysine (K)-specific methyltransferase 2E -0.0316878
OXR1 oxidation resistance 1 -0.0311739
AKAP12 A kinase (PRKA) anchor protein 12 -0.0307368
RAB7A RAB7A, member RAS oncogene family -0.0304094
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0301786
SCFD2 sec1 family domain containing 2 -0.0294573
RPL35A ribosomal protein L35a -0.029062
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain -0.0280515
SBF2 SET binding factor 2 -0.0279711
CDC73 cell division cycle 73 -0.0279344
DCT dopachrome tautomerase -0.0277773
S100A6 S100 calcium binding protein A6 -0.0276494
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0267099
HELZ helicase with zinc finger -0.026606
PLIN2 perilipin 2 -0.0265235
GHR growth hormone receptor -0.0250392
HBP1 HMG-box transcription factor 1 -0.0249774
S100A9 S100 calcium binding protein A9 -0.0245752
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0239897
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0239446
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.023847
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0236934
TIMP3 TIMP metallopeptidase inhibitor 3 -0.023569
TNRC6B trinucleotide repeat containing 6B -0.0234932
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0229769
ENO1 enolase 1, (alpha) -0.0228076
ANKRD12 ankyrin repeat domain 12 -0.0227686
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0227128
MRPS6 mitochondrial ribosomal protein S6 -0.0226136
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0225667
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0223432
LMAN1 lectin, mannose-binding, 1 -0.0221663
PGK1 phosphoglycerate kinase 1 -0.0220557
RNF145 ring finger protein 145 -0.0219573
ZBTB20 zinc finger and BTB domain containing 20 -0.0218521
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0217721
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.021167
PTPRM protein tyrosine phosphatase, receptor type, M -0.021131
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0208658
TRIM2 tripartite motif containing 2 -0.0207683
NPR2 natriuretic peptide receptor 2 -0.0205997
HLA-A major histocompatibility complex, class I, A -0.0205389
KDM3A lysine (K)-specific demethylase 3A -0.0205127
ATF4 activating transcription factor 4 -0.0197579
UBE3C ubiquitin protein ligase E3C -0.0195346
PUM2 pumilio RNA-binding family member 2 -0.01948
ARHGAP6 Rho GTPase activating protein 6 -0.0194617
NCOA7 nuclear receptor coactivator 7 -0.0193092
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) -0.019092
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0189978
NPEPPS aminopeptidase puromycin sensitive -0.0189666
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0184941
BBX bobby sox homolog (Drosophila) -0.0183678
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0182909
HSPB1 heat shock 27kDa protein 1 -0.0182562
TGFBR1 transforming growth factor, beta receptor 1 -0.0180424
ZEB1 zinc finger E-box binding homeobox 1 -0.0179636
INSYN2B inhibitory synaptic factor family member 2B -0.0174407
PNLIPRP3 pancreatic lipase-related protein 3 -0.0173504
MEF2A myocyte enhancer factor 2A -0.0171626
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0169932
FIP1L1 factor interacting with PAPOLA and CPSF1 -0.0168916
PTCHD4 patched domain containing 4 -0.0167844
GPC6 glypican 6 -0.0167672
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.016722
COL19A1 collagen, type XIX, alpha 1 -0.016581
TNPO3 transportin 3 -0.0165734
NEK7 NIMA-related kinase 7 -0.0165161
PCNP PEST proteolytic signal containing nuclear protein -0.0163122
CERT1 ceramide transporter 1 -0.0162414
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0161989
GARS1 glycyl-tRNA synthetase 1 -0.0160964
RPLP1 ribosomal protein, large, P1 -0.0158561
PRAME preferentially expressed antigen in melanoma -0.0156031
TNRC6C trinucleotide repeat containing 6C -0.0155909
SSBP2 single-stranded DNA binding protein 2 -0.0154829
PIAS1 protein inhibitor of activated STAT, 1 -0.0154127
CENPF centromere protein F, 350/400kDa -0.0151655
VDAC1 voltage-dependent anion channel 1 -0.0149941