Lidocaine (hydrochloride)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SAMD4A sterile alpha motif domain containing 4A 0.124617
FNDC3B fibronectin type III domain containing 3B 0.104865
MT2A metallothionein 2A 0.0947894
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.093833
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0928169
SMAD3 SMAD family member 3 0.0802944
LAMC2 laminin, gamma 2 0.0787836
RAD51B RAD51 paralog B 0.0760201
EFNA5 ephrin-A5 0.0759141
ASPH aspartate beta-hydroxylase 0.0679685
CP ceruloplasmin (ferroxidase) 0.0658294
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0647118
ARHGAP26 Rho GTPase activating protein 26 0.061967
MYH9 myosin, heavy chain 9, non-muscle 0.0618504
MAML2 mastermind-like 2 (Drosophila) 0.0597429
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0594504
DOCK5 dedicator of cytokinesis 5 0.0591245
ADAM28 ADAM metallopeptidase domain 28 0.0555001
RNF213 ring finger protein 213 0.0552086
TMSB4X thymosin beta 4, X-linked 0.0549852
APOL1 apolipoprotein L, 1 0.0541889
BACE2 beta-site APP-cleaving enzyme 2 0.0540899
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0527632
AHNAK AHNAK nucleoprotein 0.0496899
LPP LIM domain containing preferred translocation partner in lipoma 0.0490685
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0484121
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0482871
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0476151
EGFR epidermal growth factor receptor 0.0471245
IRAK3 interleukin-1 receptor-associated kinase 3 0.0466679
APP amyloid beta (A4) precursor protein 0.0465801
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0456754
ZBTB20 zinc finger and BTB domain containing 20 0.0450117
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0447921
KIAA1217 KIAA1217 0.0444845
SEPTIN9 septin 9 0.0441145
MMP7 matrix metallopeptidase 7 0.0436865
LAMB3 laminin, beta 3 0.043282
PLEC plectin 0.0429341
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0426273
WWTR1 WW domain containing transcription regulator 1 0.042292
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0406357
TBC1D22A TBC1 domain family, member 22A 0.0398039
ITGA6 integrin, alpha 6 0.0397075
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0391089
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0385891
ANXA4 annexin A4 0.0383647
SH3KBP1 SH3-domain kinase binding protein 1 0.0383287
TPT1 tumor protein, translationally-controlled 1 0.0381032
PDE4D phosphodiesterase 4D, cAMP-specific 0.0377229
TGM2 transglutaminase 2 0.0375229
BZW1 basic leucine zipper and W2 domains 1 0.0373603
NRG3 neuregulin 3 0.0369056
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0368263
ATXN1 ataxin 1 0.0367704
PLAT plasminogen activator, tissue 0.0357631
PARD3 par-3 family cell polarity regulator 0.0352861
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.035229
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0351974
USP34 ubiquitin specific peptidase 34 0.0347154
ZMYND8 zinc finger, MYND-type containing 8 0.0346045
PRELID2 PRELI domain containing 2 0.0343272
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0337763
NRIP1 nuclear receptor interacting protein 1 0.0336219
TOP2A topoisomerase (DNA) II alpha 170kDa 0.033307
CMIP c-Maf inducing protein 0.03305
LIMCH1 LIM and calponin homology domains 1 0.032799
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0322124
CDCP1 CUB domain containing protein 1 0.031646
TMC5 transmembrane channel-like 5 0.0306456
C15ORF48 chromosome 15 open reading frame 48 0.0299407
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0297784
MYOF myoferlin 0.0297285
KTN1 kinectin 1 (kinesin receptor) 0.029693
NUMB numb homolog (Drosophila) 0.0296892
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0289058
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0288052
ECE1 endothelin converting enzyme 1 0.0287915
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 0.0286476
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0283278
LCN2 lipocalin 2 0.028155
MACF1 microtubule-actin crosslinking factor 1 0.0275031
EXOC4 exocyst complex component 4 0.0274691
RPS8 ribosomal protein S8 0.0274015
TRIO trio Rho guanine nucleotide exchange factor 0.0273551
RPL19 ribosomal protein L19 0.0272495
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0272056
CAPN2 calpain 2, (m/II) large subunit 0.0271476
ZMIZ1 zinc finger, MIZ-type containing 1 0.0269006
MT1E metallothionein 1E 0.0267839
NRP1 neuropilin 1 0.0267417
AFAP1 actin filament associated protein 1 0.0266701
APLP2 amyloid beta (A4) precursor-like protein 2 0.0264681
BCAS3 breast carcinoma amplified sequence 3 0.0263862
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0263368
BBX bobby sox homolog (Drosophila) 0.0262222
BPTF bromodomain PHD finger transcription factor 0.0257152
PDIA4 protein disulfide isomerase family A, member 4 0.0256638
OSMR oncostatin M receptor 0.0255121
BCAR3 breast cancer anti-estrogen resistance 3 0.0251593

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.153149
TSC22D2 TSC22 domain family, member 2 -0.127168
FTH1 ferritin, heavy polypeptide 1 -0.125704
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.117358
SPAG9 sperm associated antigen 9 -0.0889144
IGFBP3 insulin-like growth factor binding protein 3 -0.0746752
HLA-A major histocompatibility complex, class I, A -0.0744585
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0714358
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0701015
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0667558
NDRG1 N-myc downstream regulated 1 -0.0579359
EIF1 eukaryotic translation initiation factor 1 -0.0575995
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0556147
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0554972
PTMA prothymosin, alpha -0.0542378
HMGA1 high mobility group AT-hook 1 -0.05329
F3 coagulation factor III (thromboplastin, tissue factor) -0.0527167
RBM39 RNA binding motif protein 39 -0.0517832
POTEF POTE ankyrin domain family, member F -0.0516267
RAB7A RAB7A, member RAS oncogene family -0.048481
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0454816
KMT2E lysine (K)-specific methyltransferase 2E -0.0454436
RCOR1 REST corepressor 1 -0.0452021
CCNL1 cyclin L1 -0.0446797
S100A6 S100 calcium binding protein A6 -0.043829
UBC ubiquitin C -0.0405349
PNPLA8 patatin-like phospholipase domain containing 8 -0.0367448
LDHA lactate dehydrogenase A -0.0361312
HELZ helicase with zinc finger -0.0359378
PCBP2 poly(rC) binding protein 2 -0.0331318
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0327934
TFG TRK-fused gene -0.0326137
TINAGL1 tubulointerstitial nephritis antigen-like 1 -0.0325183
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.031895
KDM5B lysine (K)-specific demethylase 5B -0.0318932
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0318411
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0315599
ACTG1 actin gamma 1 -0.031445
FTL ferritin, light polypeptide -0.0308861
TJP1 tight junction protein 1 -0.0307887
NPTN neuroplastin -0.0304354
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0303452
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0299879
CLDN4 claudin 4 -0.0297226
PAPOLA poly(A) polymerase alpha -0.0293495
KDM2A lysine (K)-specific demethylase 2A -0.0288085
GLS2 glutaminase 2 (liver, mitochondrial) -0.0286697
EGR1 early growth response 1 -0.0285205
ARL5B ADP-ribosylation factor-like 5B -0.0281608
RAB1A RAB1A, member RAS oncogene family -0.0279866
NUP58 nucleoporin 58 -0.0275874
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0274672
LOC102724023 ES1 protein homolog, mitochondrial -0.027217
BLZF1 basic leucine zipper nuclear factor 1 -0.0270097
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0265187
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0264051
IFI27 interferon, alpha-inducible protein 27 -0.0255142
MCU mitochondrial calcium uniporter -0.0253405
JUP junction plakoglobin -0.0250206
MCTP1 multiple C2 domains, transmembrane 1 -0.0249726
WASF2 WAS protein family, member 2 -0.0248061
PLAU plasminogen activator, urokinase -0.0246152
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0245373
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0244631
ADAM9 ADAM metallopeptidase domain 9 -0.0244045
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0242206
CDC73 cell division cycle 73 -0.0241679
TAGLN2 transgelin 2 -0.0240742
MUC1 mucin 1, cell surface associated -0.0238509
IFRD1 interferon-related developmental regulator 1 -0.023636
SEC23A Sec23 homolog A (S. cerevisiae) -0.023538
WSB1 WD repeat and SOCS box containing 1 -0.0235374
HSPG2 heparan sulfate proteoglycan 2 -0.023519
ABI1 abl-interactor 1 -0.0234402
FGFR1 fibroblast growth factor receptor 1 -0.0231763
LMO7 LIM domain 7 -0.0230562
NOP58 NOP58 ribonucleoprotein -0.0230244
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain -0.0229784
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0229663
PUM2 pumilio RNA-binding family member 2 -0.0229173
SGMS2 sphingomyelin synthase 2 -0.0228011
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0226478
CRABP2 cellular retinoic acid binding protein 2 -0.0226466
UBE2D1 ubiquitin-conjugating enzyme E2D 1 -0.0225667
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0224052
SIK3 SIK family kinase 3 -0.0223918
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0223452
TUFT1 tuftelin 1 -0.0220487
RAP2B RAP2B, member of RAS oncogene family -0.022019
CLIP4 CAP-GLY domain containing linker protein family, member 4 -0.0219718
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0216405
ZNF292 zinc finger protein 292 -0.0215839
BRD2 bromodomain containing 2 -0.0212931
RLF rearranged L-myc fusion -0.0208552
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0208318
SEC24A SEC24 family member A -0.0207965
GSK3B glycogen synthase kinase 3 beta -0.0207175
RNASEH2A ribonuclease H2, subunit A -0.0205694
ZNF207 zinc finger protein 207 -0.0205368
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0203883