Lidocaine (hydrochloride)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.186702
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.123105
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.109791
EXT1 exostosin glycosyltransferase 1 0.102568
TLE4 transducin-like enhancer of split 4 0.100697
AKAP12 A kinase (PRKA) anchor protein 12 0.0966489
MYH9 myosin, heavy chain 9, non-muscle 0.0852906
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0719284
ZSWIM6 zinc finger, SWIM-type containing 6 0.0679334
FMN1 formin 1 0.061926
CENPF centromere protein F, 350/400kDa 0.0591116
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0569128
FERMT2 fermitin family member 2 0.0562718
DPH6 diphthamine biosynthesis 6 0.0550427
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0532904
ACTG1 actin gamma 1 0.0496793
RPL3 ribosomal protein L3 0.0480447
PDLIM5 PDZ and LIM domain 5 0.0476717
SEPTIN9 septin 9 0.0468781
GLCCI1 glucocorticoid induced 1 0.0454091
FAM107B family with sequence similarity 107, member B 0.0448148
ACTN1 actinin, alpha 1 0.0444553
LOC112694756 uncharaterized LOC112694756 0.0442994
APP amyloid beta (A4) precursor protein 0.0428778
THSD4 thrombospondin, type I, domain containing 4 0.0427467
THBS1 thrombospondin 1 0.0422277
TPM1 tropomyosin 1 (alpha) 0.0414885
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0412372
MBNL1 muscleblind-like splicing regulator 1 0.0401124
SLC38A2 solute carrier family 38, member 2 0.0386729
DNMBP dynamin binding protein 0.0382214
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0381683
TIMP2 TIMP metallopeptidase inhibitor 2 0.0380944
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.038062
TRIO trio Rho guanine nucleotide exchange factor 0.0375131
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0370569
FNBP1 formin binding protein 1 0.0369509
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0365338
PTPRK protein tyrosine phosphatase, receptor type, K 0.0364586
PRKCA protein kinase C, alpha 0.0355742
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0353221
PTPRD protein tyrosine phosphatase, receptor type, D 0.035204
FNDC3A fibronectin type III domain containing 3A 0.0351355
ENAH enabled homolog (Drosophila) 0.0344676
SLIT2 slit homolog 2 (Drosophila) 0.0342679
HILPDA hypoxia inducible lipid droplet-associated 0.0338447
AEBP2 AE binding protein 2 0.0338151
RPS6 ribosomal protein S6 0.0334566
VMP1 vacuole membrane protein 1 0.0331897
COL4A2 collagen, type IV, alpha 2 0.0326208
SIK2 salt-inducible kinase 2 0.0322855
GATAD2B GATA zinc finger domain containing 2B 0.0322819
DSTN destrin (actin depolymerizing factor) 0.0321815
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0316956
AUTS2 autism susceptibility candidate 2 0.0316707
RPL23 ribosomal protein L23 0.0314979
MACF1 microtubule-actin crosslinking factor 1 0.0313666
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0309575
TIMP3 TIMP metallopeptidase inhibitor 3 0.030807
SMAD3 SMAD family member 3 0.030746
TPT1 tumor protein, translationally-controlled 1 0.030507
MYO6 myosin VI 0.0304316
PACS1 phosphofurin acidic cluster sorting protein 1 0.0303685
HOMER1 homer scaffolding protein 1 0.0301233
MEIS2 Meis homeobox 2 0.0299285
CTNND1 catenin (cadherin-associated protein), delta 1 0.0296919
ITPRID2 ITPR interacting domain containing 2 0.029247
PSD3 pleckstrin and Sec7 domain containing 3 0.0291793
TOP1 topoisomerase (DNA) I 0.0290199
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.028831
ASPH aspartate beta-hydroxylase 0.0287076
CRH corticotropin releasing hormone 0.0287044
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0285507
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0285151
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0281871
AMOTL1 angiomotin like 1 0.0281252
NDRG1 N-myc downstream regulated 1 0.0280427
NCOR2 nuclear receptor corepressor 2 0.0280072
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0279204
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.027702
GNAS GNAS complex locus 0.0276604
ANKRD11 ankyrin repeat domain 11 0.0274508
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0274
APLP2 amyloid beta (A4) precursor-like protein 2 0.0273461
FBXL20 F-box and leucine-rich repeat protein 20 0.0273225
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.027057
GPBP1 GC-rich promoter binding protein 1 0.0268897
MYO1E myosin IE 0.0268376
JARID2 jumonji, AT rich interactive domain 2 0.0267824
RGS4 regulator of G-protein signaling 4 0.0267662
MED13 mediator complex subunit 13 0.026758
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0264999
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0264855
ACTN4 actinin, alpha 4 0.0264102
SSBP3 single stranded DNA binding protein 3 0.026373
IRS1 insulin receptor substrate 1 0.0262943
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.0258266
RPL37 ribosomal protein L37 0.0257161
NPAS2 neuronal PAS domain protein 2 0.0256019
GSE1 Gse1 coiled-coil protein 0.0255636

decreased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 -0.083508
LSAMP limbic system-associated membrane protein -0.0754517
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0618725
HIP1 huntingtin interacting protein 1 -0.043635
DLC1 DLC1 Rho GTPase activating protein -0.0372919
EGFR epidermal growth factor receptor -0.0351024
COL1A1 collagen, type I, alpha 1 -0.0343583
RAI14 retinoic acid induced 14 -0.0331351
BCAS3 breast carcinoma amplified sequence 3 -0.0320486
NBEA neurobeachin -0.0319031
ATXN10 ataxin 10 -0.030709
ANTXR1 anthrax toxin receptor 1 -0.0304042
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0290362
CADM2 cell adhesion molecule 2 -0.0288523
LRP1B low density lipoprotein receptor-related protein 1B -0.0275329
SH3PXD2B SH3 and PX domains 2B -0.0256791
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0255712
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0240873
RPL35A ribosomal protein L35a -0.0231752
FRMD4A FERM domain containing 4A -0.0230924
NAMPT nicotinamide phosphoribosyltransferase -0.0229815
COL3A1 collagen, type III, alpha 1 -0.0225434
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0218057
ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 -0.0217974
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0215916
MAML2 mastermind-like 2 (Drosophila) -0.0212562
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.021193
KIF5B kinesin family member 5B -0.0210292
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0209201
PTEN phosphatase and tensin homolog -0.0208091
PRKG1 protein kinase, cGMP-dependent, type I -0.0207004
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0204682
YEATS2 YEATS domain containing 2 -0.0204088
ZBTB20 zinc finger and BTB domain containing 20 -0.0203401
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0202894
KLHL5 kelch-like family member 5 -0.0196698
KCNIP4 Kv channel interacting protein 4 -0.0196692
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.019624
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0194719
RPS2 ribosomal protein S2 -0.0192514
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0191182
CALU calumenin -0.0189827
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0186492
GPC5 glypican 5 -0.0185841
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 -0.0185436
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0184951
KPNB1 karyopherin (importin) beta 1 -0.0182938
TNRC6B trinucleotide repeat containing 6B -0.0182124
EVL Enah/Vasp-like -0.0182089
IFIH1 interferon induced with helicase C domain 1 -0.0180487
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0180429
YLPM1 YLP motif containing 1 -0.0175406
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0170897
SSB Sjogren syndrome antigen B (autoantigen La) -0.0170032
SENP7 SUMO1/sentrin specific peptidase 7 -0.0169511
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0167722
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0167679
SEC31A SEC31 homolog A (S. cerevisiae) -0.0167476
EPAS1 endothelial PAS domain protein 1 -0.0166914
PGAP1 post-GPI attachment to proteins 1 -0.016555
NREP neuronal regeneration related protein -0.0164119
ANGPT1 angiopoietin 1 -0.0163441
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 -0.0161974
HLA-A major histocompatibility complex, class I, A -0.0161547
HMGA2 high mobility group AT-hook 2 -0.0161485
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0160257
TMSB10 thymosin beta 10 -0.0159619
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0158943
NVL nuclear VCP-like -0.0158925
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0158081
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0157694
ZC3H7A zinc finger CCCH-type containing 7A -0.0156783
SOS1 son of sevenless homolog 1 (Drosophila) -0.0155828
TBCK TBC1 domain containing kinase -0.0155538
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0154553
TBC1D5 TBC1 domain family, member 5 -0.0154004
WWP2 WW domain containing E3 ubiquitin protein ligase 2 -0.015397
RBM27 RNA binding motif protein 27 -0.0152718
NCK1 NCK adaptor protein 1 -0.0152601
PRRX1 paired related homeobox 1 -0.0152559
GOLGA4 golgin A4 -0.0152197
PTPN2 protein tyrosine phosphatase, non-receptor type 2 -0.0150041
NKTR natural killer cell triggering receptor -0.0150021
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0148402
ZNF292 zinc finger protein 292 -0.014767
MEF2A myocyte enhancer factor 2A -0.0147554
FGF13 fibroblast growth factor 13 -0.0147316
SPAG16 sperm associated antigen 16 -0.0147084
FTO fat mass and obesity associated -0.0146979
EPHA3 EPH receptor A3 -0.0146518
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0144664
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 -0.0143567
ANTXR2 anthrax toxin receptor 2 -0.0143449
SAMD5 sterile alpha motif domain containing 5 -0.0143052
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 -0.0142897
COPS2 COP9 signalosome subunit 2 -0.0142422
ZNF814 zinc finger protein 814 -0.0142252
RPLP1 ribosomal protein, large, P1 -0.0141918
SNRPN small nuclear ribonucleoprotein polypeptide N -0.0141321
FOXK2 forkhead box K2 -0.0141021