Lidocaine (hydrochloride)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.14032
RNF213 ring finger protein 213 0.124234
LCN2 lipocalin 2 0.10914
B2M beta-2-microglobulin 0.107871
SMAD3 SMAD family member 3 0.106335
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0951017
TPT1 tumor protein, translationally-controlled 1 0.0931577
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0921391
GCLC glutamate-cysteine ligase, catalytic subunit 0.0828839
EXT1 exostosin glycosyltransferase 1 0.0786527
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0779972
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0778855
ANXA2 annexin A2 0.0752905
ARHGAP26 Rho GTPase activating protein 26 0.0702665
EFNB2 ephrin-B2 0.068809
AKAP13 A kinase (PRKA) anchor protein 13 0.0679158
TSC22D1 TSC22 domain family, member 1 0.0671058
VCL vinculin 0.0645289
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0630217
PKM pyruvate kinase, muscle 0.0595065
STS steroid sulfatase (microsomal), isozyme S 0.0584755
EPSTI1 epithelial stromal interaction 1 (breast) 0.0581366
MYO1E myosin IE 0.0577639
MSI2 musashi RNA-binding protein 2 0.0575775
C6ORF132 chromosome 6 open reading frame 132 0.057133
GMDS GDP-mannose 4,6-dehydratase 0.0568008
AREG amphiregulin 0.0550269
RUNX1 runt-related transcription factor 1 0.0537657
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0536817
LPP LIM domain containing preferred translocation partner in lipoma 0.0525755
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0522479
PRKCA protein kinase C, alpha 0.0516725
IFI6 interferon, alpha-inducible protein 6 0.0511576
SQSTM1 sequestosome 1 0.0507215
PERP PERP, TP53 apoptosis effector 0.0477713
LOC112694756 uncharaterized LOC112694756 0.0474908
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0474449
ASPH aspartate beta-hydroxylase 0.0459284
HLA-B major histocompatibility complex, class I, B 0.0452535
ZSWIM6 zinc finger, SWIM-type containing 6 0.0452123
INTS6 integrator complex subunit 6 0.0451014
ITGA6 integrin, alpha 6 0.0450339
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0435091
ACTG1 actin gamma 1 0.0419256
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.041315
SP100 SP100 nuclear antigen 0.0411561
ETV6 ets variant 6 0.0406621
TRERF1 transcriptional regulating factor 1 0.0390663
MX2 MX dynamin-like GTPase 2 0.0388763
MYH9 myosin, heavy chain 9, non-muscle 0.0386186
TMC5 transmembrane channel-like 5 0.0375556
TJP1 tight junction protein 1 0.0367041
HKDC1 hexokinase domain containing 1 0.0359244
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0357517
LAMA4 laminin, alpha 4 0.0356368
ERBIN erbb2 interacting protein 0.0355524
MED13 mediator complex subunit 13 0.0354774
CATSPERB catsper channel auxiliary subunit beta 0.0353301
SYNE2 spectrin repeat containing, nuclear envelope 2 0.035063
ERN1 endoplasmic reticulum to nucleus signaling 1 0.034991
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0346737
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0345027
PLSCR2 phospholipid scramblase 2 0.0339248
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0338225
TM4SF19 transmembrane 4 L six family member 19 0.0331369
EPHB2 EPH receptor B2 0.0331293
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0330811
ACTN4 actinin, alpha 4 0.0327886
CTBP2 C-terminal binding protein 2 0.032761
EZR ezrin 0.0327352
MAP7 microtubule-associated protein 7 0.0325801
DSCAM Down syndrome cell adhesion molecule 0.032214
ENO1 enolase 1, (alpha) 0.0322072
MX1 MX dynamin-like GTPase 1 0.0320204
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0318775
SHB Src homology 2 domain containing adaptor protein B 0.0318724
MUC13 mucin 13, cell surface associated 0.0317198
CTNND1 catenin (cadherin-associated protein), delta 1 0.0314985
ATP11A ATPase, class VI, type 11A 0.0312641
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0309737
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0308601
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0308059
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0302187
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.029624
FTL ferritin, light polypeptide 0.0293295
MYH14 myosin, heavy chain 14, non-muscle 0.0293032
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0292805
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0292678
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.028928
MYO5B myosin VB 0.0289216
KYNU kynureninase 0.0289003
DST dystonin 0.0288999
MACC1 metastasis associated in colon cancer 1 0.0286066
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0285977
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0284219
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.0282609
TM4SF1 transmembrane 4 L six family member 1 0.0282523
EPCAM epithelial cell adhesion molecule 0.0282116
PGK1 phosphoglycerate kinase 1 0.0281907
SEPTIN9 septin 9 0.0279847

decreased expression

Symbol Name Standardized Value
MBNL2 muscleblind-like splicing regulator 2 -0.0466227
COG6 component of oligomeric golgi complex 6 -0.0251199
GOLGB1 golgin B1 -0.0247712
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0200987
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0200191
MON2 MON2 homolog (S. cerevisiae) -0.0193789
PTEN phosphatase and tensin homolog -0.0182796
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0177149
TMEM39A transmembrane protein 39A -0.0177123
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0173259
PDIA3 protein disulfide isomerase family A, member 3 -0.0172111
NDRG1 N-myc downstream regulated 1 -0.0160122
COPA coatomer protein complex, subunit alpha -0.0159084
SREBF2 sterol regulatory element binding transcription factor 2 -0.0157893
BCLAF1 BCL2-associated transcription factor 1 -0.0154591
AKAP9 A kinase (PRKA) anchor protein 9 -0.0140988
SEC24D SEC24 family member D -0.0137465
CANX calnexin -0.0128767
FTH1 ferritin, heavy polypeptide 1 -0.0123173
GOLPH3L golgi phosphoprotein 3-like -0.0121724
FNDC3A fibronectin type III domain containing 3A -0.0117684
MCTP2 multiple C2 domains, transmembrane 2 -0.0115556
PRRC1 proline-rich coiled-coil 1 -0.0114648
TMEM263 transmembrane protein 263 -0.0113601
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked -0.0112108
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0110827
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 -0.0110277
EPB41 erythrocyte membrane protein band 4.1 -0.0108472
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0106264
HM13 histocompatibility (minor) 13 -0.0102826
RAB2A RAB2A, member RAS oncogene family -0.010178
SRP54 signal recognition particle 54kDa -0.0101156
TTC3 tetratricopeptide repeat domain 3 -0.00998941
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.00998511
SLC10A7 solute carrier family 10, member 7 -0.00987366
PHC3 polyhomeotic homolog 3 (Drosophila) -0.00986372
TRAM1 translocation associated membrane protein 1 -0.00986012
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 -0.00981894
LYZ lysozyme -0.00956289
PNPLA8 patatin-like phospholipase domain containing 8 -0.00954096
FAM114A1 family with sequence similarity 114, member A1 -0.00938969
MTREX Mtr4 exosome RNA helicase -0.0093767
LMAN1 lectin, mannose-binding, 1 -0.00936073
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.00929479
SRBD1 S1 RNA binding domain 1 -0.00919271
COPB1 coatomer protein complex, subunit beta 1 -0.00906897
GOLGA4 golgin A4 -0.0090476
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.00891625
KLHL24 kelch-like family member 24 -0.00886977
TXNDC11 thioredoxin domain containing 11 -0.0088615
FKBP9 FK506 binding protein 9, 63 kDa -0.0088294
A1CF APOBEC1 complementation factor -0.00879857
GRK3 G protein-coupled receptor kinase 3 -0.0087177
PDIA5 protein disulfide isomerase family A, member 5 -0.00871574
SEC23A Sec23 homolog A (S. cerevisiae) -0.00865292
WDR26 WD repeat domain 26 -0.00862999
RAB6A RAB6A, member RAS oncogene family -0.00861482
NUCB2 nucleobindin 2 -0.00859151
CENPF centromere protein F, 350/400kDa -0.00858298
LCORL ligand dependent nuclear receptor corepressor-like -0.00855099
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.00848276
COG3 component of oligomeric golgi complex 3 -0.00836659
PGM3 phosphoglucomutase 3 -0.00833152
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.00822326
ARF4 ADP-ribosylation factor 4 -0.00821646
TFG TRK-fused gene -0.00816493
SEC23B Sec23 homolog B (S. cerevisiae) -0.00812426
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3 -0.00811868
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.00811697
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) -0.00789341
SEC31A SEC31 homolog A (S. cerevisiae) -0.00788171
CADPS2 Ca++-dependent secretion activator 2 -0.00787207
GOSR2 golgi SNAP receptor complex member 2 -0.00787144
INSIG1 insulin induced gene 1 -0.00786844
SCARB1 scavenger receptor class B, member 1 -0.00785947
TMF1 TATA element modulatory factor 1 -0.00783032
ERLEC1 endoplasmic reticulum lectin 1 -0.00780913
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.00772632
MSMO1 methylsterol monooxygenase 1 -0.00767066
USO1 USO1 vesicle transport factor -0.00766362
SUCO SUN domain containing ossification factor -0.00764648
ZNF652 zinc finger protein 652 -0.00764628
ATOSA atos homolog A -0.00761214
GORASP2 golgi reassembly stacking protein 2, 55kDa -0.00760873
UFM1 ubiquitin-fold modifier 1 -0.0075309
SEC24A SEC24 family member A -0.00749364
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.00742582
TMEM165 transmembrane protein 165 -0.00737287
MCEE methylmalonyl CoA epimerase -0.00734795
ZNF841 zinc finger protein 841 -0.00731133
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) -0.00729382
USP3 ubiquitin specific peptidase 3 -0.00726409
CALU calumenin -0.00724928
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.00723083
JMY junction mediating and regulatory protein, p53 cofactor -0.00716225
ACBD3 acyl-CoA binding domain containing 3 -0.00713617
HELZ helicase with zinc finger -0.00710611
ALPK1 alpha-kinase 1 -0.00710336
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 -0.00710291
FOSL2 FOS-like antigen 2 -0.00709898