Lidocaine (hydrochloride)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PSD3 pleckstrin and Sec7 domain containing 3 0.0962947
DST dystonin 0.0948409
WWTR1 WW domain containing transcription regulator 1 0.0824262
MACF1 microtubule-actin crosslinking factor 1 0.0696123
BCAR3 breast cancer anti-estrogen resistance 3 0.0688832
ZBTB38 zinc finger and BTB domain containing 38 0.0646064
FMNL2 formin-like 2 0.0643888
LOC112694756 uncharaterized LOC112694756 0.0635702
RUNX1 runt-related transcription factor 1 0.0631429
CAPRIN2 caprin family member 2 0.0602181
EZR ezrin 0.0567168
ERRFI1 ERBB receptor feedback inhibitor 1 0.0516194
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0507407
NPAS2 neuronal PAS domain protein 2 0.0506746
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0490436
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.047774
PLEC plectin 0.0469292
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0435324
RCOR1 REST corepressor 1 0.0421106
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0419395
MYH9 myosin, heavy chain 9, non-muscle 0.0403542
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0401693
RPL3 ribosomal protein L3 0.0400475
USP34 ubiquitin specific peptidase 34 0.0384936
EEF2 eukaryotic translation elongation factor 2 0.0383667
TRIO trio Rho guanine nucleotide exchange factor 0.037267
CFLAR CASP8 and FADD-like apoptosis regulator 0.0368056
ZSWIM6 zinc finger, SWIM-type containing 6 0.036621
NCEH1 neutral cholesterol ester hydrolase 1 0.0362387
MYOF myoferlin 0.0354507
MB21D2 Mab-21 domain containing 2 0.0338684
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0333365
SMAD3 SMAD family member 3 0.0322435
CMIP c-Maf inducing protein 0.0321452
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0318277
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 0.0311963
TM4SF1 transmembrane 4 L six family member 1 0.0311766
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0299565
ZDHHC14 zinc finger, DHHC-type containing 14 0.0296265
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0293948
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0291722
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0287531
RPS18 ribosomal protein S18 0.0287178
PLK2 polo-like kinase 2 0.0273734
HOMER1 homer scaffolding protein 1 0.026739
TRIP12 thyroid hormone receptor interactor 12 0.0262793
DOCK1 dedicator of cytokinesis 1 0.0259104
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0259074
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0258792
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0252701
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0249262
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0246897
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0241651
ADGRG6 adhesion G protein-coupled receptor G6 0.0240556
SPAG9 sperm associated antigen 9 0.0235854
HSPA8 heat shock 70kDa protein 8 0.0235848
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0235097
KRT18 keratin 18, type I 0.023423
ZFAND3 zinc finger, AN1-type domain 3 0.0232803
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0230399
FER fer (fps/fes related) tyrosine kinase 0.0229396
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0225416
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0224429
NAV2 neuron navigator 2 0.0224361
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0224114
TOP1 topoisomerase (DNA) I 0.0223261
PYGB phosphorylase, glycogen; brain 0.0221827
LYST lysosomal trafficking regulator 0.0219346
SAMD4A sterile alpha motif domain containing 4A 0.0218028
EIF4H eukaryotic translation initiation factor 4H 0.0217192
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.0216968
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0214764
CXCL8 chemokine (C-X-C motif) ligand 8 0.0214614
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0212564
GATAD2A GATA zinc finger domain containing 2A 0.0209736
SLC38A2 solute carrier family 38, member 2 0.0207646
KTN1 kinectin 1 (kinesin receptor) 0.0207297
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0206877
USP11 ubiquitin specific peptidase 11 0.020589
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0205289
LOXL2 lysyl oxidase-like 2 0.020428
DNER delta/notch-like EGF repeat containing 0.0204037
MOK MOK protein kinase 0.0201491
HDLBP high density lipoprotein binding protein 0.0199895
CLIP2 CAP-GLY domain containing linker protein 2 0.0199642
AHNAK AHNAK nucleoprotein 0.0198661
ZC3H11A zinc finger CCCH-type containing 11A 0.0196789
DPYSL2 dihydropyrimidinase-like 2 0.0196719
RGS4 regulator of G-protein signaling 4 0.019603
GLS2 glutaminase 2 (liver, mitochondrial) 0.0195734
AREG amphiregulin 0.019421
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0194133
MCTP1 multiple C2 domains, transmembrane 1 0.0193887
BRD2 bromodomain containing 2 0.0191174
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0191163
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0189777
VEGFC vascular endothelial growth factor C 0.0187428
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0184841
INTS6 integrator complex subunit 6 0.0184835
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0182052

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.115129
PTMA prothymosin, alpha -0.109333
TMSB10 thymosin beta 10 -0.0764585
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0668915
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0609539
HLA-B major histocompatibility complex, class I, B -0.0573852
CANX calnexin -0.0502328
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0472083
RIGI RNA sensor RIG-I -0.0471772
WARS1 tryptophanyl-tRNA synthetase 1 -0.0381818
RPL35A ribosomal protein L35a -0.0362195
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0360675
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0358585
UBC ubiquitin C -0.0357781
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0357191
RPL12 ribosomal protein L12 -0.0336623
RPS27A ribosomal protein S27a -0.0336487
IFIH1 interferon induced with helicase C domain 1 -0.0327537
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.031234
TPT1 tumor protein, translationally-controlled 1 -0.031031
HMGA1 high mobility group AT-hook 1 -0.0306213
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.030427
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0297249
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0296889
FTL ferritin, light polypeptide -0.0290978
MT1E metallothionein 1E -0.0289235
ENO1 enolase 1, (alpha) -0.0265685
B2M beta-2-microglobulin -0.0262643
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0255279
NAMPT nicotinamide phosphoribosyltransferase -0.0254775
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0250518
PMP22 peripheral myelin protein 22 -0.0242221
TP63 tumor protein p63 -0.0235777
IFITM1 interferon induced transmembrane protein 1 -0.02338
RPS8 ribosomal protein S8 -0.0230472
DPH6 diphthamine biosynthesis 6 -0.0229912
DLG1 discs, large homolog 1 (Drosophila) -0.02278
SP100 SP100 nuclear antigen -0.0219072
MARCHF6 membrane associated ring-CH-type finger 6 -0.0210798
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0206569
FTH1 ferritin, heavy polypeptide 1 -0.0205269
RPL26 ribosomal protein L26 -0.0204059
ANKRD12 ankyrin repeat domain 12 -0.0204026
LDHA lactate dehydrogenase A -0.0202455
RACK1 receptor for activated C kinase 1 -0.0201569
CALR calreticulin -0.0198669
KPNB1 karyopherin (importin) beta 1 -0.0196262
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0195443
S100A6 S100 calcium binding protein A6 -0.0194656
NPEPPS aminopeptidase puromycin sensitive -0.0181279
RAB27B RAB27B, member RAS oncogene family -0.0181263
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0178318
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0177351
BRWD1 bromodomain and WD repeat domain containing 1 -0.0175847
LMAN1 lectin, mannose-binding, 1 -0.0174974
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.017491
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 -0.0171376
RPS21 ribosomal protein S21 -0.0168689
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0168433
HLA-A major histocompatibility complex, class I, A -0.0167171
RPL34 ribosomal protein L34 -0.0166303
RPL9 ribosomal protein L9 -0.0165274
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0164645
VDAC1 voltage-dependent anion channel 1 -0.0163857
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0163237
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0162661
HLA-E major histocompatibility complex, class I, E -0.016208
KDM3A lysine (K)-specific demethylase 3A -0.0159335
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 -0.0156655
ZRANB2 zinc finger, RAN-binding domain containing 2 -0.0154042
RB1CC1 RB1-inducible coiled-coil 1 -0.0153781
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0152379
RPS28 ribosomal protein S28 -0.0152273
CFDP1 craniofacial development protein 1 -0.0150906
CFAP299 cilia and flagella associated protein 299 -0.0150753
IFITM3 interferon induced transmembrane protein 3 -0.0150538
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0149911
RPS14 ribosomal protein S14 -0.0149193
RPL36A ribosomal protein L36a -0.0146972
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0146735
CCDC91 coiled-coil domain containing 91 -0.0145907
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0144615
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0143953
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0143892
MBNL2 muscleblind-like splicing regulator 2 -0.0142835
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0141855
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) -0.0140428
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0139413
PGK1 phosphoglycerate kinase 1 -0.0138106
PDIA5 protein disulfide isomerase family A, member 5 -0.013549
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0134202
WDR43 WD repeat domain 43 -0.0132992
ISG15 ISG15 ubiquitin-like modifier -0.0132132
GOLGA4 golgin A4 -0.0131512
ARL4C ADP-ribosylation factor-like 4C -0.0129858
WDR45B WD repeat domain 45B -0.0129164
THOC2 THO complex 2 -0.0127634
XPO1 exportin 1 -0.0127261
S100A9 S100 calcium binding protein A9 -0.0126415
SNX6 sorting nexin 6 -0.0126238