Lidocaine (hydrochloride)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.176036
MYH9 myosin, heavy chain 9, non-muscle 0.0952565
RPL3 ribosomal protein L3 0.0898255
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0869411
WWOX WW domain containing oxidoreductase 0.0824429
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0818575
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0742752
PLEC plectin 0.0682845
AKAP12 A kinase (PRKA) anchor protein 12 0.0675509
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0659434
FLNA filamin A, alpha 0.065512
PM20D1 peptidase M20 domain containing 1 0.0643585
TM4SF1 transmembrane 4 L six family member 1 0.0613044
SAMD4A sterile alpha motif domain containing 4A 0.0609451
ANKRD11 ankyrin repeat domain 11 0.0590391
LOC112694756 uncharaterized LOC112694756 0.0588155
EEF2 eukaryotic translation elongation factor 2 0.0586352
DOCK5 dedicator of cytokinesis 5 0.0546648
HSPA8 heat shock 70kDa protein 8 0.0546106
FAM107B family with sequence similarity 107, member B 0.0541036
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0530113
ATXN1 ataxin 1 0.0525215
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0523336
ANGPTL4 angiopoietin-like 4 0.0514729
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0510631
RPL23 ribosomal protein L23 0.0506765
TRIO trio Rho guanine nucleotide exchange factor 0.0502165
DSCAM Down syndrome cell adhesion molecule 0.0464759
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0462463
MCL1 myeloid cell leukemia 1 0.046094
BRD2 bromodomain containing 2 0.0442829
MACF1 microtubule-actin crosslinking factor 1 0.0441669
TPT1 tumor protein, translationally-controlled 1 0.0431409
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0430475
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0417635
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0411274
MYOF myoferlin 0.0399801
AHNAK AHNAK nucleoprotein 0.0378956
RPS12 ribosomal protein S12 0.0375785
BMP6 bone morphogenetic protein 6 0.036898
SMOC1 SPARC related modular calcium binding 1 0.0367193
MSN moesin 0.0366523
ACTN1 actinin, alpha 1 0.0359685
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0357114
TPM3 tropomyosin 3 0.0355814
ATP11A ATPase, class VI, type 11A 0.035355
AGO2 argonaute RISC catalytic component 2 0.0349845
SLC38A2 solute carrier family 38, member 2 0.0345879
FNDC3B fibronectin type III domain containing 3B 0.0344149
FLNB filamin B, beta 0.0343947
USP34 ubiquitin specific peptidase 34 0.0342762
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0336278
H1-4 H1.4 linker histone, cluster member 0.0333289
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0330304
ZSWIM6 zinc finger, SWIM-type containing 6 0.0326135
PFKP phosphofructokinase, platelet 0.0317541
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0317317
ACTG1 actin gamma 1 0.0312073
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.031179
RAD51B RAD51 paralog B 0.0309685
SFPQ splicing factor proline/glutamine-rich 0.030767
DCAF8 DDB1 and CUL4 associated factor 8 0.030343
APLP2 amyloid beta (A4) precursor-like protein 2 0.0301281
PKM pyruvate kinase, muscle 0.0297396
GLS2 glutaminase 2 (liver, mitochondrial) 0.0295663
FHIT fragile histidine triad 0.029418
WAC WW domain containing adaptor with coiled-coil 0.0291835
HDLBP high density lipoprotein binding protein 0.0289257
UBASH3B ubiquitin associated and SH3 domain containing B 0.0289075
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0288774
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0283962
TOP1 topoisomerase (DNA) I 0.0283751
MT1X metallothionein 1X 0.0281294
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0276377
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0274096
SOD2 superoxide dismutase 2, mitochondrial 0.0272699
AHNAK2 AHNAK nucleoprotein 2 0.027237
CTBP2 C-terminal binding protein 2 0.0270784
PDE10A phosphodiesterase 10A 0.0269135
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0267622
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0264697
RNF213 ring finger protein 213 0.0264284
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0260054
RPL31 ribosomal protein L31 0.0258498
SEPTIN9 septin 9 0.0256488
INTS6 integrator complex subunit 6 0.0255933
RPS27A ribosomal protein S27a 0.025531
NNMT nicotinamide N-methyltransferase 0.0255102
RPTOR regulatory associated protein of MTOR, complex 1 0.0254473
H1-10 H1.10 linker histone 0.0253703
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0252328
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0250944
IER3 immediate early response 3 0.0249854
CREBBP CREB binding protein 0.0249521
TPI1 triosephosphate isomerase 1 0.0249387
NCKAP1 NCK-associated protein 1 0.0249024
RPS18 ribosomal protein S18 0.0248975
SMAD3 SMAD family member 3 0.0248578
NAP1L1 nucleosome assembly protein 1-like 1 0.0248133
DOCK1 dedicator of cytokinesis 1 0.0247165

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.145782
TXNRD1 thioredoxin reductase 1 -0.143227
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.134354
IGF2 insulin-like growth factor 2 -0.118181
FTH1 ferritin, heavy polypeptide 1 -0.113266
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.113151
FTL ferritin, light polypeptide -0.100418
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.096449
TFPI2 tissue factor pathway inhibitor 2 -0.0862998
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0841779
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0806744
GRAMD1B GRAM domain containing 1B -0.0731703
FGB fibrinogen beta chain -0.0580344
NEGR1 neuronal growth regulator 1 -0.0528392
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0517574
IGFBP3 insulin-like growth factor binding protein 3 -0.0498106
HDAC9 histone deacetylase 9 -0.048913
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0478496
S100A6 S100 calcium binding protein A6 -0.0463851
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0445206
AHR aryl hydrocarbon receptor -0.0441547
SLC38A1 solute carrier family 38, member 1 -0.0427116
PYGL phosphorylase, glycogen, liver -0.0425333
BICC1 BicC family RNA binding protein 1 -0.0420611
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0411062
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0408935
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0405591
EGR1 early growth response 1 -0.0399742
RTN4 reticulon 4 -0.0375521
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0362228
PFN1 profilin 1 -0.0345595
PLS3 plastin 3 -0.0327551
TPM4 tropomyosin 4 -0.0321853
PTMA prothymosin, alpha -0.0321654
ARL5B ADP-ribosylation factor-like 5B -0.0313622
HMGA1 high mobility group AT-hook 1 -0.0303966
ERBIN erbb2 interacting protein -0.0300889
WDR43 WD repeat domain 43 -0.0300059
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0298319
USP3 ubiquitin specific peptidase 3 -0.0288789
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0286555
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0285938
POTEF POTE ankyrin domain family, member F -0.0279657
RBM39 RNA binding motif protein 39 -0.027403
CHN1 chimerin 1 -0.0271102
PFDN2 prefoldin subunit 2 -0.0264094
NAMPT nicotinamide phosphoribosyltransferase -0.0259564
PAWR PRKC, apoptosis, WT1, regulator -0.025281
KMT2E lysine (K)-specific methyltransferase 2E -0.0252188
VIM vimentin -0.0247792
NAV3 neuron navigator 3 -0.0247608
DGKD diacylglycerol kinase, delta 130kDa -0.0247073
RPL35A ribosomal protein L35a -0.0245821
MORF4L1 mortality factor 4 like 1 -0.0244059
RNF217 ring finger protein 217 -0.0243753
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.024277
KPNB1 karyopherin (importin) beta 1 -0.0242689
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0241582
EFNA5 ephrin-A5 -0.0241487
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0240153
OSMR oncostatin M receptor -0.0239963
ADGRG6 adhesion G protein-coupled receptor G6 -0.0238813
ALCAM activated leukocyte cell adhesion molecule -0.0237835
BHLHE40 basic helix-loop-helix family, member e40 -0.0233509
BMPR1B bone morphogenetic protein receptor, type IB -0.0227113
CCNL1 cyclin L1 -0.0225744
NSUN6 NOP2/Sun domain family, member 6 -0.0221856
PRR16 proline rich 16 -0.0221169
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0220346
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0216618
ANKRD28 ankyrin repeat domain 28 -0.0214837
VEZT vezatin, adherens junctions transmembrane protein -0.0212734
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0210718
PDIA6 protein disulfide isomerase family A, member 6 -0.0208905
RAD21 RAD21 homolog (S. pombe) -0.0208145
C15ORF48 chromosome 15 open reading frame 48 -0.0207096
NCOA7 nuclear receptor coactivator 7 -0.0205975
IGFBP4 insulin-like growth factor binding protein 4 -0.0205756
ZNF804A zinc finger protein 804A -0.0204326
LMAN1 lectin, mannose-binding, 1 -0.0204123
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0203997
NUP58 nucleoporin 58 -0.0201646
MAML3 mastermind-like 3 (Drosophila) -0.0201608
YBX1 Y box binding protein 1 -0.0200122
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0199567
TFG TRK-fused gene -0.0199444
THBS1 thrombospondin 1 -0.0199125
RNF145 ring finger protein 145 -0.0195913
AK1 adenylate kinase 1 -0.0193566
NPC1 Niemann-Pick disease, type C1 -0.0192119
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.019147
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0190987
RHEB Ras homolog enriched in brain -0.0190287
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0190117
TBC1D19 TBC1 domain family, member 19 -0.0188706
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0187756
TMEM123 transmembrane protein 123 -0.0187215
WBP11 WW domain binding protein 11 -0.0186842
CANX calnexin -0.0186642
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0185292