Lidocaine (hydrochloride)_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.19916
MYO1E myosin IE 0.160584
BACE2 beta-site APP-cleaving enzyme 2 0.130679
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.114946
SAMD4A sterile alpha motif domain containing 4A 0.110532
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.10619
ELL2 elongation factor, RNA polymerase II, 2 0.10429
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0935352
EFNA5 ephrin-A5 0.0888554
AHNAK AHNAK nucleoprotein 0.0839451
PDE4D phosphodiesterase 4D, cAMP-specific 0.0802755
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0785821
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0772137
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0763038
TPT1 tumor protein, translationally-controlled 1 0.0737688
LAMC2 laminin, gamma 2 0.072695
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.072278
S100A9 S100 calcium binding protein A9 0.0711738
LOC112694756 uncharaterized LOC112694756 0.069822
AKAP13 A kinase (PRKA) anchor protein 13 0.0694377
EXT1 exostosin glycosyltransferase 1 0.0671678
CEMIP cell migration inducing protein, hyaluronan binding 0.0652784
PLAUR plasminogen activator, urokinase receptor 0.0646036
ZSWIM6 zinc finger, SWIM-type containing 6 0.0629615
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0613147
DSPP dentin sialophosphoprotein 0.0588404
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0579616
PTPRM protein tyrosine phosphatase, receptor type, M 0.0572472
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0560108
EZR ezrin 0.0558378
HSPA8 heat shock 70kDa protein 8 0.0557109
LIMCH1 LIM and calponin homology domains 1 0.0541596
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0529454
RPS6 ribosomal protein S6 0.0524102
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0522238
RPS3 ribosomal protein S3 0.0504751
TSC22D2 TSC22 domain family, member 2 0.0499828
SVIL supervillin 0.0496527
FLNB filamin B, beta 0.0496205
IGF1R insulin-like growth factor 1 receptor 0.0494206
ERRFI1 ERBB receptor feedback inhibitor 1 0.0493852
EGFR epidermal growth factor receptor 0.0493224
MUC16 mucin 16, cell surface associated 0.0491329
AFF1 AF4/FMR2 family, member 1 0.0485957
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0483362
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0479266
MUC13 mucin 13, cell surface associated 0.0475329
PERP PERP, TP53 apoptosis effector 0.0471986
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0467242
ABHD17C abhydrolase domain containing 17C 0.0463296
LAMA4 laminin, alpha 4 0.0462749
WWC1 WW and C2 domain containing 1 0.0453062
IQGAP1 IQ motif containing GTPase activating protein 1 0.0449687
FGFR2 fibroblast growth factor receptor 2 0.0449251
PUM2 pumilio RNA-binding family member 2 0.0447835
MYOF myoferlin 0.0446819
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0439033
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0434938
SLC38A2 solute carrier family 38, member 2 0.0431476
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0422881
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0421871
RPL23 ribosomal protein L23 0.0420908
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0418462
DOCK1 dedicator of cytokinesis 1 0.0412195
ATXN1 ataxin 1 0.0411058
RPLP1 ribosomal protein, large, P1 0.0410713
CMIP c-Maf inducing protein 0.0405581
EPS8 epidermal growth factor receptor pathway substrate 8 0.0404588
DOCK5 dedicator of cytokinesis 5 0.0397238
RPS12 ribosomal protein S12 0.0396953
NPTN neuroplastin 0.0389955
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0388609
MACF1 microtubule-actin crosslinking factor 1 0.0381294
TOP1 topoisomerase (DNA) I 0.038089
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0380777
THSD4 thrombospondin, type I, domain containing 4 0.0377778
DSCAM Down syndrome cell adhesion molecule 0.0376988
KDM2A lysine (K)-specific demethylase 2A 0.0376482
LAMB3 laminin, beta 3 0.0372619
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0366955
TM4SF1 transmembrane 4 L six family member 1 0.0364216
USP6NL USP6 N-terminal like 0.0363444
ATOSA atos homolog A 0.0362559
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0359121
ANXA1 annexin A1 0.0358551
SMAD3 SMAD family member 3 0.0357827
NABP1 nucleic acid binding protein 1 0.0352219
KRT17 keratin 17, type I 0.0347767
PTK2 protein tyrosine kinase 2 0.0343476
H3-3B H3.3 histone B 0.0338929
JARID2 jumonji, AT rich interactive domain 2 0.0336605
BTBD9 BTB (POZ) domain containing 9 0.0335135
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0329335
NEBL nebulette 0.0327433
DUSP5 dual specificity phosphatase 5 0.0324345
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.032204
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0312491
CHD7 chromodomain helicase DNA binding protein 7 0.0310731
HSPH1 heat shock 105kDa/110kDa protein 1 0.030422
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.0302308

decreased expression

Symbol Name Standardized Value
SPAG9 sperm associated antigen 9 -0.0910074
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0805023
GPC6 glypican 6 -0.0791783
RIGI RNA sensor RIG-I -0.0790565
LSAMP limbic system-associated membrane protein -0.075785
IFIH1 interferon induced with helicase C domain 1 -0.0751872
BRWD1 bromodomain and WD repeat domain containing 1 -0.0744803
RNF145 ring finger protein 145 -0.0708233
NRG1 neuregulin 1 -0.066386
RTN4 reticulon 4 -0.06606
VIM vimentin -0.0656157
ENO1 enolase 1, (alpha) -0.0618819
TRIO trio Rho guanine nucleotide exchange factor -0.0600634
RSAD2 radical S-adenosyl methionine domain containing 2 -0.058254
SMYD3 SET and MYND domain containing 3 -0.0535462
EGR1 early growth response 1 -0.0520144
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0518617
COPA coatomer protein complex, subunit alpha -0.0492315
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0487796
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.047979
NBAS neuroblastoma amplified sequence -0.0474684
TXNRD1 thioredoxin reductase 1 -0.0467879
B2M beta-2-microglobulin -0.0450244
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.044528
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.042994
PDE10A phosphodiesterase 10A -0.0419363
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0414188
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0412457
TTC17 tetratricopeptide repeat domain 17 -0.0405469
CHD1 chromodomain helicase DNA binding protein 1 -0.0403017
ZNF292 zinc finger protein 292 -0.0401345
LDHA lactate dehydrogenase A -0.0400721
FCHSD2 FCH and double SH3 domains 2 -0.0398078
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0392388
WSB1 WD repeat and SOCS box containing 1 -0.0390473
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) -0.0388161
PRRC2C proline-rich coiled-coil 2C -0.0387591
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0382598
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 -0.0373041
NEDD1 neural precursor cell expressed, developmentally down-regulated 1 -0.0370222
ZMYM2 zinc finger, MYM-type 2 -0.0368749
USP33 ubiquitin specific peptidase 33 -0.0368065
VGF VGF nerve growth factor inducible -0.0367668
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 -0.0364584
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0359744
CHD9 chromodomain helicase DNA binding protein 9 -0.0355137
KPNB1 karyopherin (importin) beta 1 -0.0349047
BBX bobby sox homolog (Drosophila) -0.0345909
FMNL2 formin-like 2 -0.0343875
VMP1 vacuole membrane protein 1 -0.0343303
SH3KBP1 SH3-domain kinase binding protein 1 -0.0338434
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0338154
USP3 ubiquitin specific peptidase 3 -0.0336382
AKAP12 A kinase (PRKA) anchor protein 12 -0.0335651
KMT2C lysine (K)-specific methyltransferase 2C -0.0333915
MATR3 matrin 3 -0.0332908
NUP58 nucleoporin 58 -0.0326647
NCOA6 nuclear receptor coactivator 6 -0.0323455
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0322634
GLS2 glutaminase 2 (liver, mitochondrial) -0.0321401
ZFC3H1 zinc finger, C3H1-type containing -0.0321148
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.032008
SRP54 signal recognition particle 54kDa -0.0317238
DCAF7 DDB1 and CUL4 associated factor 7 -0.0317088
CDC27 cell division cycle 27 -0.0314458
VGLL4 vestigial-like family member 4 -0.0313178
VEGFA vascular endothelial growth factor A -0.0310058
TET2 tet methylcytosine dioxygenase 2 -0.0308562
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0307898
MED13 mediator complex subunit 13 -0.030584
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0304428
OASL 2'-5'-oligoadenylate synthetase-like -0.030369
MORF4L2 mortality factor 4 like 2 -0.0303243
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0300359
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0299154
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0298799
RFX7 regulatory factor X, 7 -0.0298648
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0298044
TCF12 transcription factor 12 -0.0296558
GPHN gephyrin -0.0295966
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease -0.0295722
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0295339
RORA RAR-related orphan receptor A -0.0295217
KLHL24 kelch-like family member 24 -0.0294991
INHBA inhibin, beta A -0.0294414
TNPO3 transportin 3 -0.0292507
SAR1A secretion associated, Ras related GTPase 1A -0.0291027
MON2 MON2 homolog (S. cerevisiae) -0.0290885
NSRP1 nuclear speckle splicing regulatory protein 1 -0.0287728
STK17A serine/threonine kinase 17a -0.0287284
GARS1 glycyl-tRNA synthetase 1 -0.0287052
OSBPL8 oxysterol binding protein-like 8 -0.0286016
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0284678
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0284439
MORC3 MORC family CW-type zinc finger 3 -0.0284354
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0284229
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0283202
DST dystonin -0.0282699
MCL1 myeloid cell leukemia 1 -0.0281754
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0279985