Lidocaine (hydrochloride)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.198032
MCL1 myeloid cell leukemia 1 0.129216
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.112245
GRAMD1B GRAM domain containing 1B 0.106472
YBX3 Y box binding protein 3 0.104733
TFPI2 tissue factor pathway inhibitor 2 0.099694
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0994965
KTN1 kinectin 1 (kinesin receptor) 0.0868332
DOCK5 dedicator of cytokinesis 5 0.0853624
ERRFI1 ERBB receptor feedback inhibitor 1 0.0833434
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0784215
ATP11A ATPase, class VI, type 11A 0.0777279
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0737167
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0728267
BRD2 bromodomain containing 2 0.0634916
RRM2 ribonucleotide reductase M2 0.0630601
NIPBL Nipped-B homolog (Drosophila) 0.0625979
ELL2 elongation factor, RNA polymerase II, 2 0.0623965
MYH9 myosin, heavy chain 9, non-muscle 0.0608525
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0600486
HSPA8 heat shock 70kDa protein 8 0.0571142
ZSWIM6 zinc finger, SWIM-type containing 6 0.056579
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0556652
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0527523
PCBP2 poly(rC) binding protein 2 0.0523303
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0521906
WNK1 WNK lysine deficient protein kinase 1 0.0517691
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0497171
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0472454
TPM3 tropomyosin 3 0.0469381
PRELID2 PRELI domain containing 2 0.0461421
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0458798
EEF2 eukaryotic translation elongation factor 2 0.0458293
CSNK1A1 casein kinase 1, alpha 1 0.0454
SFPQ splicing factor proline/glutamine-rich 0.0453372
IPO7 importin 7 0.0452538
WWOX WW domain containing oxidoreductase 0.0443065
RPL3 ribosomal protein L3 0.0439859
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0436306
EIF4A1 eukaryotic translation initiation factor 4A1 0.0429783
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0429538
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0427334
INTS6 integrator complex subunit 6 0.0425761
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0413114
EXT1 exostosin glycosyltransferase 1 0.0412723
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0412624
SLC38A2 solute carrier family 38, member 2 0.0411811
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0409419
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0407232
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0406587
HOMER1 homer scaffolding protein 1 0.0401183
PDE10A phosphodiesterase 10A 0.0394276
DCAF8 DDB1 and CUL4 associated factor 8 0.0391972
FLNA filamin A, alpha 0.0381147
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0368254
VCP valosin containing protein 0.0367257
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0365231
RAB7A RAB7A, member RAS oncogene family 0.0363585
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0353693
GPHN gephyrin 0.0346619
TRA2A transformer 2 alpha homolog (Drosophila) 0.034646
SET SET nuclear proto-oncogene 0.0337026
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0337002
SPAG9 sperm associated antigen 9 0.0336284
POTEF POTE ankyrin domain family, member F 0.0335647
SVIL supervillin 0.0333758
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0332274
TPI1 triosephosphate isomerase 1 0.0331973
LOC112694756 uncharaterized LOC112694756 0.0328755
RCOR1 REST corepressor 1 0.032874
MARCHF4 membrane associated ring-CH-type finger 4 0.0328589
AEBP2 AE binding protein 2 0.0326311
PDLIM5 PDZ and LIM domain 5 0.0325575
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0315041
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0313386
CALD1 caldesmon 1 0.0312066
CLTC clathrin, heavy chain (Hc) 0.0311565
RTN4 reticulon 4 0.0309398
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0308198
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0306673
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0303307
FUS FUS RNA binding protein 0.0298643
WNT2B wingless-type MMTV integration site family, member 2B 0.0296663
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0294009
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0290425
WAC WW domain containing adaptor with coiled-coil 0.0288192
UBC ubiquitin C 0.0282176
NEK10 NIMA-related kinase 10 0.0281802
GSK3B glycogen synthase kinase 3 beta 0.0280493
MYPN myopalladin 0.0279832
YAP1 Yes-associated protein 1 0.0279531
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0276778
SNAP25 synaptosomal-associated protein, 25kDa 0.0276285
USP34 ubiquitin specific peptidase 34 0.0275161
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0275065
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0274943
AKAP12 A kinase (PRKA) anchor protein 12 0.0272057
CCT7 chaperonin containing TCP1, subunit 7 (eta) 0.026609
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0265234
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0265189

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.113037
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.106623
TMSB10 thymosin beta 10 -0.103847
PTMA prothymosin, alpha -0.0774238
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0638796
CANX calnexin -0.0589675
VIM vimentin -0.0529565
AHNAK AHNAK nucleoprotein -0.0526841
NCOA7 nuclear receptor coactivator 7 -0.0437008
RPL35A ribosomal protein L35a -0.0379796
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0378039
ZBTB20 zinc finger and BTB domain containing 20 -0.0376154
RAD51B RAD51 paralog B -0.0371463
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0355469
MT2A metallothionein 2A -0.0332083
SENP6 SUMO1/sentrin specific peptidase 6 -0.0324014
BASP1 brain abundant, membrane attached signal protein 1 -0.0321178
RPS21 ribosomal protein S21 -0.0320917
PHF21A PHD finger protein 21A -0.0314933
WASF2 WAS protein family, member 2 -0.0307149
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0293698
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0293399
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0291921
ZNF292 zinc finger protein 292 -0.0279574
EGFR epidermal growth factor receptor -0.0278785
RSF1 remodeling and spacing factor 1 -0.027815
ETV6 ets variant 6 -0.0276858
BBX bobby sox homolog (Drosophila) -0.0274786
KMT2A lysine (K)-specific methyltransferase 2A -0.0262399
EGR1 early growth response 1 -0.0259814
MAP4 microtubule-associated protein 4 -0.0257117
PDIA4 protein disulfide isomerase family A, member 4 -0.0254916
ZMYND8 zinc finger, MYND-type containing 8 -0.0251187
RPL36A ribosomal protein L36a -0.0250369
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0249357
TAS2R14 taste receptor, type 2, member 14 -0.0248856
RPL34 ribosomal protein L34 -0.0247887
RPS27 ribosomal protein S27 -0.0245716
TBC1D5 TBC1 domain family, member 5 -0.0241861
ANKRD28 ankyrin repeat domain 28 -0.0240068
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.024005
RSL1D1 ribosomal L1 domain containing 1 -0.023618
DENND5B DENN/MADD domain containing 5B -0.0234626
EML4 echinoderm microtubule associated protein like 4 -0.0229329
RPL23 ribosomal protein L23 -0.0227469
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.022386
RGS17 regulator of G-protein signaling 17 -0.0223349
IGF2 insulin-like growth factor 2 -0.0222727
FNDC3B fibronectin type III domain containing 3B -0.0222186
HMGA2 high mobility group AT-hook 2 -0.0221085
TPM4 tropomyosin 4 -0.0219637
TNRC6B trinucleotide repeat containing 6B -0.0217744
NSRP1 nuclear speckle splicing regulatory protein 1 -0.0216502
FTL ferritin, light polypeptide -0.0216238
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0216188
FCHSD2 FCH and double SH3 domains 2 -0.021318
RPS29 ribosomal protein S29 -0.0213007
EHBP1 EH domain binding protein 1 -0.0212909
ARHGAP5 Rho GTPase activating protein 5 -0.0208566
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0207581
RNF169 ring finger protein 169 -0.0207264
TLK1 tousled-like kinase 1 -0.0206936
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0205564
SINHCAF SIN3-HDAC complex associated factor -0.0204283
PATJ PATJ crumbs cell polarity complex component -0.02042
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0203764
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 -0.0203279
RPL32 ribosomal protein L32 -0.0199928
RPLP2 ribosomal protein, large, P2 -0.019915
LMAN1 lectin, mannose-binding, 1 -0.0197358
ARB2A ARB2 cotranscriptional regulator A -0.0195079
NSD1 nuclear receptor binding SET domain protein 1 -0.0194261
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0194174
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0192435
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0191204
S100A10 S100 calcium binding protein A10 -0.0190814
ZFR zinc finger RNA binding protein -0.0188789
FMN1 formin 1 -0.0188497
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0187471
NSUN6 NOP2/Sun domain family, member 6 -0.0184319
FAM13A family with sequence similarity 13, member A -0.0183891
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0182163
TULP3 tubby like protein 3 -0.0179676
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0179188
RAD21 RAD21 homolog (S. pombe) -0.017681
ODF2L outer dense fiber of sperm tails 2-like -0.0174907
HMGA1 high mobility group AT-hook 1 -0.0174738
ACBD6 acyl-CoA binding domain containing 6 -0.0174735
ZMYM2 zinc finger, MYM-type 2 -0.0173038
S100A6 S100 calcium binding protein A6 -0.0172999
SRPK2 SRSF protein kinase 2 -0.0169801
RPS6 ribosomal protein S6 -0.0169702
TRIM56 tripartite motif containing 56 -0.0169067
NFIA nuclear factor I/A -0.0169043
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.0168386
TRERF1 transcriptional regulating factor 1 -0.0168022
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0167741
GATAD2B GATA zinc finger domain containing 2B -0.0167557
GLG1 golgi glycoprotein 1 -0.0166609
RPL31 ribosomal protein L31 -0.0165021