Lidocaine (hydrochloride)_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.148714
GDA guanine deaminase 0.139803
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.123634
PDE4D phosphodiesterase 4D, cAMP-specific 0.115358
COL5A2 collagen, type V, alpha 2 0.105759
PSD3 pleckstrin and Sec7 domain containing 3 0.0970455
TRIO trio Rho guanine nucleotide exchange factor 0.0933274
PDE10A phosphodiesterase 10A 0.085538
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0811901
KYNU kynureninase 0.0767177
FMNL2 formin-like 2 0.074605
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0736885
TPT1 tumor protein, translationally-controlled 1 0.0721229
TM4SF1 transmembrane 4 L six family member 1 0.0703098
MYOF myoferlin 0.0675979
PDLIM5 PDZ and LIM domain 5 0.0664895
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0656198
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0649424
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0648305
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0644947
LOC112694756 uncharaterized LOC112694756 0.0623727
ELL2 elongation factor, RNA polymerase II, 2 0.0620493
GRAMD1B GRAM domain containing 1B 0.0606463
FNDC3B fibronectin type III domain containing 3B 0.0605495
CD109 CD109 molecule 0.0588385
DST dystonin 0.0588227
NEK7 NIMA-related kinase 7 0.0586576
ASPH aspartate beta-hydroxylase 0.0569341
COL8A1 collagen, type VIII, alpha 1 0.0559033
DOCK4 dedicator of cytokinesis 4 0.0552243
EEF2 eukaryotic translation elongation factor 2 0.0547944
ESYT2 extended synaptotagmin-like protein 2 0.0540626
ZEB2 zinc finger E-box binding homeobox 2 0.053878
SLC38A2 solute carrier family 38, member 2 0.0533714
MCL1 myeloid cell leukemia 1 0.0533015
AKAP13 A kinase (PRKA) anchor protein 13 0.0515809
EZR ezrin 0.0512042
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.0505514
NT5C2 5'-nucleotidase, cytosolic II 0.0498543
NRCAM neuronal cell adhesion molecule 0.0496733
P3H2 prolyl 3-hydroxylase 2 0.0496619
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0492464
NAP1L1 nucleosome assembly protein 1-like 1 0.0492068
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0480499
DOCK5 dedicator of cytokinesis 5 0.0471046
SPAG9 sperm associated antigen 9 0.0450585
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0437396
FLNB filamin B, beta 0.041702
RAB3B RAB3B, member RAS oncogene family 0.0409198
NAMPT nicotinamide phosphoribosyltransferase 0.0407901
NPAS2 neuronal PAS domain protein 2 0.0406591
SMYD3 SET and MYND domain containing 3 0.0405278
PCBP3 poly(rC) binding protein 3 0.0403584
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.039899
AGFG1 ArfGAP with FG repeats 1 0.0397802
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0396351
COL4A5 collagen, type IV, alpha 5 0.0392757
TGFBR1 transforming growth factor, beta receptor 1 0.0387145
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0386756
SMAD2 SMAD family member 2 0.03776
OGA O-GlcNAcase 0.0369797
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0369204
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0361888
RPL3 ribosomal protein L3 0.0361608
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0360501
CDH13 cadherin 13 0.0357306
BCAR3 breast cancer anti-estrogen resistance 3 0.0355174
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0352997
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0352899
ENAH enabled homolog (Drosophila) 0.0350823
ITPRID2 ITPR interacting domain containing 2 0.0350805
MYH9 myosin, heavy chain 9, non-muscle 0.0348545
BZW1 basic leucine zipper and W2 domains 1 0.0342645
ZC3H11A zinc finger CCCH-type containing 11A 0.0340761
VCL vinculin 0.0333926
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0333925
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0330855
TNPO1 transportin 1 0.0329018
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.03284
IGF1R insulin-like growth factor 1 receptor 0.0327414
RTN4 reticulon 4 0.0325047
NCKAP1 NCK-associated protein 1 0.0315763
USP9X ubiquitin specific peptidase 9, X-linked 0.0315551
BMERB1 bMERB domain containing 1 0.0307737
RPS4X ribosomal protein S4, X-linked 0.0304479
CSNK1A1 casein kinase 1, alpha 1 0.0304438
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0303576
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0302431
EIF4H eukaryotic translation initiation factor 4H 0.0302194
RPH3AL rabphilin 3A-like (without C2 domains) 0.0300463
RBM39 RNA binding motif protein 39 0.0299884
ALPK2 alpha-kinase 2 0.0298537
LAMA1 laminin, alpha 1 0.0298156
SH3KBP1 SH3-domain kinase binding protein 1 0.029613
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0295354
DGKD diacylglycerol kinase, delta 130kDa 0.0293825
NALF1 NALCN channel auxiliary factor 1 0.0292406
PGK1 phosphoglycerate kinase 1 0.0290274
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0288235
SAMD4A sterile alpha motif domain containing 4A 0.0286879

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.127097
TMSB10 thymosin beta 10 -0.117308
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.107744
VIM vimentin -0.097741
RPS6 ribosomal protein S6 -0.0663723
RPLP1 ribosomal protein, large, P1 -0.0636888
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0595703
RPS19 ribosomal protein S19 -0.0560252
FTL ferritin, light polypeptide -0.0546225
RPL35A ribosomal protein L35a -0.0522886
IGFBP3 insulin-like growth factor binding protein 3 -0.0518722
RPS23 ribosomal protein S23 -0.0466941
FN1 fibronectin 1 -0.0462095
RPL34 ribosomal protein L34 -0.0451427
RPL12 ribosomal protein L12 -0.044596
RPS27 ribosomal protein S27 -0.0381485
FTH1 ferritin, heavy polypeptide 1 -0.0361318
RPL31 ribosomal protein L31 -0.0360607
RPS8 ribosomal protein S8 -0.0350771
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0350002
RPS29 ribosomal protein S29 -0.034864
MT2A metallothionein 2A -0.0337947
PTMA prothymosin, alpha -0.031164
RPL23 ribosomal protein L23 -0.0308997
RPS14 ribosomal protein S14 -0.0299385
RPS13 ribosomal protein S13 -0.0297424
CANX calnexin -0.0294891
EGR1 early growth response 1 -0.0282965
RPL35 ribosomal protein L35 -0.0271985
RPL32 ribosomal protein L32 -0.0268624
PDIA3 protein disulfide isomerase family A, member 3 -0.0265474
RPL37A ribosomal protein L37a -0.0256383
RPL36 ribosomal protein L36 -0.0249863
ASTN2 astrotactin 2 -0.0246447
ENO1 enolase 1, (alpha) -0.0240186
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0234173
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0222482
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0218348
RPS17 ribosomal protein S17 -0.0214576
IL6 interleukin 6 -0.0213934
RPLP2 ribosomal protein, large, P2 -0.0211823
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0208138
RPS2 ribosomal protein S2 -0.02017
POTEF POTE ankyrin domain family, member F -0.0193714
RPS16 ribosomal protein S16 -0.0190895
CXXC1 CXXC finger protein 1 -0.0188944
RPL28 ribosomal protein L28 -0.0187614
ATF4 activating transcription factor 4 -0.0182677
LSAMP limbic system-associated membrane protein -0.0180928
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0170754
RPL27 ribosomal protein L27 -0.016871
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0167607
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0167583
HMGB1 high mobility group box 1 -0.016438
RPS21 ribosomal protein S21 -0.016304
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.01599
CALR calreticulin -0.0158023
RPL26 ribosomal protein L26 -0.0156446
RPL21 ribosomal protein L21 -0.0154353
CLU clusterin -0.0152572
RPS26 ribosomal protein S26 -0.0150372
IFITM3 interferon induced transmembrane protein 3 -0.0146255
RPS15 ribosomal protein S15 -0.0145638
HMGA1 high mobility group AT-hook 1 -0.0142841
RPS28 ribosomal protein S28 -0.0141383
RPL13A ribosomal protein L13a -0.0140408
AGR2 anterior gradient 2 -0.0138741
TBCA tubulin folding cofactor A -0.013755
RPL5 ribosomal protein L5 -0.0134873
RPS5 ribosomal protein S5 -0.0133371
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0132562
IFIH1 interferon induced with helicase C domain 1 -0.0132162
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0132105
CST3 cystatin C -0.0128216
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0126915
PRELID2 PRELI domain containing 2 -0.0125343
GOLGB1 golgin B1 -0.0124594
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0124433
RPS25 ribosomal protein S25 -0.0124126
RPS20 ribosomal protein S20 -0.0123244
GLRX glutaredoxin (thioltransferase) -0.0123163
KRT19 keratin 19, type I -0.0121757
SSR4 signal sequence receptor, delta -0.0119023
PCDH15 protocadherin-related 15 -0.0116902
S100A9 S100 calcium binding protein A9 -0.0115903
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0115249
AUTS2 autism susceptibility candidate 2 -0.0114688
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0113961
VEGFA vascular endothelial growth factor A -0.0112468
RPL7 ribosomal protein L7 -0.0112455
RPL9 ribosomal protein L9 -0.0110992
ENO2 enolase 2 (gamma, neuronal) -0.0108724
MRPS2 mitochondrial ribosomal protein S2 -0.0108567
TCEAL4 transcription elongation factor A (SII)-like 4 -0.0108519
BTG1 B-cell translocation gene 1, anti-proliferative -0.0107471
PAPPA2 pappalysin 2 -0.010682
PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa -0.010524
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0104438
ICE2 interactor of little elongation complex ELL subunit 2 -0.0103539
EIF1 eukaryotic translation initiation factor 1 -0.0103182