Lidocaine (hydrochloride)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.108519
FRMD4A FERM domain containing 4A 0.108263
PALM2AKAP2 PALM2 and AKAP2 fusion 0.105571
COL5A1 collagen, type V, alpha 1 0.103408
CD44 CD44 molecule (Indian blood group) 0.0966492
COL6A2 collagen, type VI, alpha 2 0.0905666
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.0849446
NAV1 neuron navigator 1 0.0841051
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0838627
AKAP12 A kinase (PRKA) anchor protein 12 0.0832921
SMAD3 SMAD family member 3 0.0755336
PSD3 pleckstrin and Sec7 domain containing 3 0.0707203
IFI6 interferon, alpha-inducible protein 6 0.0670978
AHNAK AHNAK nucleoprotein 0.0650199
NRP1 neuropilin 1 0.0640546
FAM20C family with sequence similarity 20, member C 0.0637675
TRIO trio Rho guanine nucleotide exchange factor 0.0631746
PLEC plectin 0.0625363
MSN moesin 0.0600545
COL7A1 collagen, type VII, alpha 1 0.059121
FHIT fragile histidine triad 0.0590649
JARID2 jumonji, AT rich interactive domain 2 0.0576719
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0565857
ANGPTL4 angiopoietin-like 4 0.0559735
ZBTB38 zinc finger and BTB domain containing 38 0.0557126
EXT1 exostosin glycosyltransferase 1 0.0549875
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0542705
WNT5A wingless-type MMTV integration site family, member 5A 0.0541448
NPAS2 neuronal PAS domain protein 2 0.0531703
SP100 SP100 nuclear antigen 0.0517419
RUNX1 runt-related transcription factor 1 0.0517298
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0513852
HDAC9 histone deacetylase 9 0.0507541
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0502792
LOC112694756 uncharaterized LOC112694756 0.0498602
COL6A1 collagen, type VI, alpha 1 0.0486444
COL4A2 collagen, type IV, alpha 2 0.0478785
H1-0 H1.0 linker histone 0.047537
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.047532
FLNB filamin B, beta 0.0471998
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0471868
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.047124
FNDC3B fibronectin type III domain containing 3B 0.0457696
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0446887
WWTR1 WW domain containing transcription regulator 1 0.0446482
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0441109
EEF2 eukaryotic translation elongation factor 2 0.0422672
MX1 MX dynamin-like GTPase 1 0.0421943
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0417354
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0410771
LOXL2 lysyl oxidase-like 2 0.0406651
RNF213 ring finger protein 213 0.0406392
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0405759
IFI44L interferon-induced protein 44-like 0.0398929
STC1 stanniocalcin 1 0.0398727
LPP LIM domain containing preferred translocation partner in lipoma 0.0396933
RAD51B RAD51 paralog B 0.0386508
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0384678
NRIP1 nuclear receptor interacting protein 1 0.0378477
SVIL supervillin 0.0378342
MTSS1 metastasis suppressor 1 0.0373618
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0372774
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0371042
VEGFA vascular endothelial growth factor A 0.0369327
DST dystonin 0.0365531
PTPRG protein tyrosine phosphatase, receptor type, G 0.0365305
HMGA2 high mobility group AT-hook 2 0.036191
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.036107
APCDD1L adenomatosis polyposis coli down-regulated 1-like 0.0357421
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0351093
TOP1 topoisomerase (DNA) I 0.0345471
FLNA filamin A, alpha 0.0342458
MCL1 myeloid cell leukemia 1 0.0337332
TGFBI transforming growth factor, beta-induced, 68kDa 0.0337017
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0331946
FAT1 FAT atypical cadherin 1 0.0331544
SMYD3 SET and MYND domain containing 3 0.0326571
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0326071
GLIS3 GLIS family zinc finger 3 0.0325085
MLPH melanophilin 0.0324154
COL5A3 collagen, type V, alpha 3 0.0323482
TPM1 tropomyosin 1 (alpha) 0.0322276
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.031737
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0315001
MED13L mediator complex subunit 13-like 0.0312257
SAMD4A sterile alpha motif domain containing 4A 0.0311331
RPS17 ribosomal protein S17 0.0310557
ACTN1 actinin, alpha 1 0.0305093
TPI1 triosephosphate isomerase 1 0.0304823
FN1 fibronectin 1 0.0303066
GRB10 growth factor receptor-bound protein 10 0.0301121
TMEM178B transmembrane protein 178B 0.0300611
EML5 echinoderm microtubule associated protein like 5 0.030019
PARD3 par-3 family cell polarity regulator 0.029704
DOCK5 dedicator of cytokinesis 5 0.0296588
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.029435
TNIP1 TNFAIP3 interacting protein 1 0.0293637
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0292928
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0289521
AFDN afadin, adherens junction formation factor 0.0288528

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.179769
FTL ferritin, light polypeptide -0.0798684
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0688908
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0648429
COL1A2 collagen, type I, alpha 2 -0.0605471
PTMA prothymosin, alpha -0.0599741
GOLGA4 golgin A4 -0.0509025
RPL35A ribosomal protein L35a -0.0392414
CENPF centromere protein F, 350/400kDa -0.0338722
TPM4 tropomyosin 4 -0.0333955
IER3 immediate early response 3 -0.0331342
SRP54 signal recognition particle 54kDa -0.0317198
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0302753
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0298982
TMSB10 thymosin beta 10 -0.0292751
CANX calnexin -0.0253679
KDM3A lysine (K)-specific demethylase 3A -0.0251076
RAB1A RAB1A, member RAS oncogene family -0.0249981
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0245136
LCORL ligand dependent nuclear receptor corepressor-like -0.0239558
PDIA3 protein disulfide isomerase family A, member 3 -0.0235736
FKBP1A FK506 binding protein 1A, 12kDa -0.0234344
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0234129
ADM adrenomedullin -0.0230047
KPNB1 karyopherin (importin) beta 1 -0.0224222
LMAN1 lectin, mannose-binding, 1 -0.0222922
TFPI2 tissue factor pathway inhibitor 2 -0.0222693
SEC31A SEC31 homolog A (S. cerevisiae) -0.0215942
TPX2 TPX2, microtubule-associated -0.0211481
RAB7A RAB7A, member RAS oncogene family -0.0203632
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0199969
SMC4 structural maintenance of chromosomes 4 -0.0199591
KDM5B lysine (K)-specific demethylase 5B -0.0199524
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0195356
ANLN anillin, actin binding protein -0.0194281
PNISR PNN-interacting serine/arginine-rich protein -0.0192757
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0192422
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0191171
ERLEC1 endoplasmic reticulum lectin 1 -0.0190868
EGR1 early growth response 1 -0.0189494
INSIG1 insulin induced gene 1 -0.0188251
PDIA6 protein disulfide isomerase family A, member 6 -0.0186596
HMGA1 high mobility group AT-hook 1 -0.0185833
ENO2 enolase 2 (gamma, neuronal) -0.0185119
FTH1 ferritin, heavy polypeptide 1 -0.0183748
SUCO SUN domain containing ossification factor -0.0183694
ARF4 ADP-ribosylation factor 4 -0.0183185
MMP12 matrix metallopeptidase 12 -0.017752
BTG1 B-cell translocation gene 1, anti-proliferative -0.0175722
PLIN2 perilipin 2 -0.0172154
RSRC1 arginine/serine-rich coiled-coil 1 -0.016812
EIF2A eukaryotic translation initiation factor 2A, 65kDa -0.0167729
RPL31 ribosomal protein L31 -0.0167614
DIAPH3 diaphanous-related formin 3 -0.0166879
GARS1 glycyl-tRNA synthetase 1 -0.0166298
COPA coatomer protein complex, subunit alpha -0.016512
POTEF POTE ankyrin domain family, member F -0.0163483
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0162518
IFIH1 interferon induced with helicase C domain 1 -0.0161999
MORF4L2 mortality factor 4 like 2 -0.0161398
NUP58 nucleoporin 58 -0.0160486
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0159774
FAM162A family with sequence similarity 162, member A -0.0156604
TENT5A terminal nucleotidyltransferase 5A -0.0156068
TFG TRK-fused gene -0.015502
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0154729
MKI67 marker of proliferation Ki-67 -0.0154611
MON2 MON2 homolog (S. cerevisiae) -0.0152765
HELZ helicase with zinc finger -0.0152717
KIF4A kinesin family member 4A -0.0152158
NREP neuronal regeneration related protein -0.014961
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0149517
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0148977
ZNF292 zinc finger protein 292 -0.0148459
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0146483
HMGB1 high mobility group box 1 -0.0144837
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0144237
ECT2 epithelial cell transforming 2 -0.0143954
IKBIP IKBKB interacting protein -0.0142689
APOLD1 apolipoprotein L domain containing 1 -0.0142182
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0141594
NAMPT nicotinamide phosphoribosyltransferase -0.0140851
KMT2E lysine (K)-specific methyltransferase 2E -0.0138691
CALU calumenin -0.0137806
AAK1 AP2 associated kinase 1 -0.0137396
CLIP4 CAP-GLY domain containing linker protein family, member 4 -0.0135798
TTK TTK protein kinase -0.0134451
LOC102724023 ES1 protein homolog, mitochondrial -0.0134295
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0134207
ARL5B ADP-ribosylation factor-like 5B -0.0133323
NDRG1 N-myc downstream regulated 1 -0.0132722
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0132481
LRRC23 leucine rich repeat containing 23 -0.0132052
ENO1 enolase 1, (alpha) -0.0130195
DYNLT3 dynein, light chain, Tctex-type 3 -0.0129989
ZNF148 zinc finger protein 148 -0.0129793
RAB5A RAB5A, member RAS oncogene family -0.0129325
MAPK6 mitogen-activated protein kinase 6 -0.012914
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0129064
TMEM165 transmembrane protein 165 -0.0129016