Lidocaine (hydrochloride)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.220271
PKM pyruvate kinase, muscle 0.127337
AHNAK AHNAK nucleoprotein 0.0989043
RPL3 ribosomal protein L3 0.0862242
H1-4 H1.4 linker histone, cluster member 0.0858562
EGFR epidermal growth factor receptor 0.0854405
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0852069
SLC38A2 solute carrier family 38, member 2 0.0827791
RHOA ras homolog family member A 0.0787752
MACROD2 MACRO domain containing 2 0.0728562
MKI67 marker of proliferation Ki-67 0.0727709
MYO5C myosin VC 0.0717605
VCL vinculin 0.0711605
SOX6 SRY (sex determining region Y)-box 6 0.0668732
TJP1 tight junction protein 1 0.0658223
EEF2 eukaryotic translation elongation factor 2 0.0657401
PDGFC platelet derived growth factor C 0.0655618
LOC112694756 uncharaterized LOC112694756 0.061124
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0559823
EZR ezrin 0.0555966
ZNF608 zinc finger protein 608 0.0554707
RRM2 ribonucleotide reductase M2 0.0548441
CENPF centromere protein F, 350/400kDa 0.053879
PRELID2 PRELI domain containing 2 0.0532146
SMC4 structural maintenance of chromosomes 4 0.0527528
ADAM10 ADAM metallopeptidase domain 10 0.0519495
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0512135
TPX2 TPX2, microtubule-associated 0.0510679
MYH9 myosin, heavy chain 9, non-muscle 0.0510273
NAV2 neuron navigator 2 0.0490466
ANXA1 annexin A1 0.0473029
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0472099
GSE1 Gse1 coiled-coil protein 0.0469701
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0467932
NPAS2 neuronal PAS domain protein 2 0.0467838
SEPTIN9 septin 9 0.0464795
HSPA8 heat shock 70kDa protein 8 0.0458672
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0456782
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0454257
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0427833
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0421719
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0405874
DIAPH3 diaphanous-related formin 3 0.0403599
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0397003
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0394795
FER1L6 fer-1-like family member 6 0.0384799
RFC3 replication factor C (activator 1) 3, 38kDa 0.0383488
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0377533
CAMTA1 calmodulin binding transcription activator 1 0.0373368
DSCAM Down syndrome cell adhesion molecule 0.0365727
TACC2 transforming, acidic coiled-coil containing protein 2 0.0346801
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0342599
CORO1C coronin, actin binding protein, 1C 0.0332428
CREBBP CREB binding protein 0.0321818
ANLN anillin, actin binding protein 0.0320969
GLI2 GLI family zinc finger 2 0.0316063
RAB27B RAB27B, member RAS oncogene family 0.0315264
WAC WW domain containing adaptor with coiled-coil 0.0308075
ANKRD36 ankyrin repeat domain 36 0.0302037
TPT1 tumor protein, translationally-controlled 1 0.030192
APLP2 amyloid beta (A4) precursor-like protein 2 0.0301784
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.0301316
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0301156
HJURP Holliday junction recognition protein 0.0299128
TM4SF1 transmembrane 4 L six family member 1 0.0298541
HEG1 heart development protein with EGF-like domains 1 0.0289296
TUBB4B tubulin, beta 4B class IVb 0.028689
FLNB filamin B, beta 0.0280843
CENPE centromere protein E, 312kDa 0.0279172
NCAPG2 non-SMC condensin II complex, subunit G2 0.0275215
FLNA filamin A, alpha 0.0274229
INTS6 integrator complex subunit 6 0.0272547
CSNK1A1 casein kinase 1, alpha 1 0.0269602
H1-5 H1.5 linker histone, cluster member 0.0268924
RPS12 ribosomal protein S12 0.0268587
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0268482
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0268372
MED13L mediator complex subunit 13-like 0.0267645
NAP1L1 nucleosome assembly protein 1-like 1 0.0266161
GLI3 GLI family zinc finger 3 0.0264328
IQGAP1 IQ motif containing GTPase activating protein 1 0.0262345
PRPF38B pre-mRNA processing factor 38B 0.0260772
ECT2 epithelial cell transforming 2 0.0258921
TGFBR3 transforming growth factor, beta receptor III 0.0258903
EBNA1BP2 EBNA1 binding protein 2 0.025647
PCM1 pericentriolar material 1 0.025608
ITGA6 integrin, alpha 6 0.0253212
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.0249798
RPS18 ribosomal protein S18 0.0247311
LMCD1 LIM and cysteine-rich domains 1 0.0246988
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0246739
ZEB1 zinc finger E-box binding homeobox 1 0.0241902
TPM3 tropomyosin 3 0.0241517
ATAD2 ATPase family, AAA domain containing 2 0.02414
CKAP5 cytoskeleton associated protein 5 0.0239948
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0237471
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0236174
ANKRD36B ankyrin repeat domain 36B 0.0232931
AHCYL2 adenosylhomocysteinase-like 2 0.0232562
NSD2 nuclear receptor binding SET domain protein 2 0.0228126

decreased expression

Symbol Name Standardized Value
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.121219
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.120515
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.113745
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.111794
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0964385
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0888022
S100A6 S100 calcium binding protein A6 -0.078938
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.077745
TXNRD1 thioredoxin reductase 1 -0.0757734
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0733648
NBEA neurobeachin -0.0681355
RPL35A ribosomal protein L35a -0.067808
PTMA prothymosin, alpha -0.0660107
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0629941
GOLGA4 golgin A4 -0.0617382
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0593545
ANK2 ankyrin 2, neuronal -0.0547591
RTN4 reticulon 4 -0.0543492
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.050401
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0498313
GPHN gephyrin -0.0466766
DLG1 discs, large homolog 1 (Drosophila) -0.0453644
RHBDD1 rhomboid domain containing 1 -0.0449531
TMEM41B transmembrane protein 41B -0.0427638
ZBTB20 zinc finger and BTB domain containing 20 -0.0401988
GARS1 glycyl-tRNA synthetase 1 -0.0398985
EXOC6B exocyst complex component 6B -0.0390037
TTC3 tetratricopeptide repeat domain 3 -0.0387911
RPL12 ribosomal protein L12 -0.0374498
B2M beta-2-microglobulin -0.0374064
RPLP1 ribosomal protein, large, P1 -0.0366866
RPL13A ribosomal protein L13a -0.0361184
JMJD1C jumonji domain containing 1C -0.035747
RPS6 ribosomal protein S6 -0.0356576
RPS19 ribosomal protein S19 -0.0352333
RPS23 ribosomal protein S23 -0.0349862
NEBL nebulette -0.0344187
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0343894
EIF1 eukaryotic translation initiation factor 1 -0.0339925
TMSB10 thymosin beta 10 -0.0323132
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0316729
PNISR PNN-interacting serine/arginine-rich protein -0.03128
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0312231
OSMR oncostatin M receptor -0.0312142
DPYD dihydropyrimidine dehydrogenase -0.0311395
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0310956
COG5 component of oligomeric golgi complex 5 -0.0310041
HMGA1 high mobility group AT-hook 1 -0.0302072
RPL32 ribosomal protein L32 -0.0299434
PHF14 PHD finger protein 14 -0.0298537
DOCK3 dedicator of cytokinesis 3 -0.029148
SSBP2 single-stranded DNA binding protein 2 -0.0289306
RPL9 ribosomal protein L9 -0.028268
ZFAND3 zinc finger, AN1-type domain 3 -0.0281328
GCLM glutamate-cysteine ligase, modifier subunit -0.027664
WDR43 WD repeat domain 43 -0.0272475
RPL11 ribosomal protein L11 -0.0272194
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0272015
SMYD3 SET and MYND domain containing 3 -0.0268773
TDRD3 tudor domain containing 3 -0.0262889
DIAPH2 diaphanous-related formin 2 -0.0261937
DENND1A DENN/MADD domain containing 1A -0.0258887
RPL19 ribosomal protein L19 -0.0258316
ATF4 activating transcription factor 4 -0.0256432
PRRC2C proline-rich coiled-coil 2C -0.0253927
ZNF292 zinc finger protein 292 -0.0253137
S100A9 S100 calcium binding protein A9 -0.0252781
PTPRG protein tyrosine phosphatase, receptor type, G -0.0251324
PARD3 par-3 family cell polarity regulator -0.0250542
VDAC1 voltage-dependent anion channel 1 -0.024944
ENO2 enolase 2 (gamma, neuronal) -0.0247009
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.024632
LDHA lactate dehydrogenase A -0.0243981
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2 -0.0240109
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0239076
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0237179
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0234028
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0233449
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0230265
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.023025
IFITM1 interferon induced transmembrane protein 1 -0.0229475
RPS16 ribosomal protein S16 -0.0225514
ELOVL5 ELOVL fatty acid elongase 5 -0.0223973
TMEM263 transmembrane protein 263 -0.022257
RPLP0 ribosomal protein, large, P0 -0.0221106
RPS13 ribosomal protein S13 -0.0219235
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0213969
AHI1 Abelson helper integration site 1 -0.0213034
PLCE1 phospholipase C, epsilon 1 -0.0212566
THOC2 THO complex 2 -0.0212055
IARS1 isoleucyl-tRNA synthetase 1 -0.0210551
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0208311
IFITM3 interferon induced transmembrane protein 3 -0.0208152
NCOR1 nuclear receptor corepressor 1 -0.0208095
ETNK1 ethanolamine kinase 1 -0.0207112
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.020683
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0206097
ALDOC aldolase C, fructose-bisphosphate -0.0205494
METTL15 methyltransferase like 15 -0.0204938
PTBP2 polypyrimidine tract binding protein 2 -0.0204617