Lidocaine (hydrochloride)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lidocaine (hydrochloride) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lidocaine (hydrochloride)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.132915
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.119052
FRMD4A FERM domain containing 4A 0.114844
AKAP12 A kinase (PRKA) anchor protein 12 0.111866
BICC1 BicC family RNA binding protein 1 0.10921
HDAC9 histone deacetylase 9 0.10596
SMAD3 SMAD family member 3 0.100953
GLIS3 GLIS family zinc finger 3 0.0989033
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0971805
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0953606
EXT1 exostosin glycosyltransferase 1 0.0928279
FNDC3B fibronectin type III domain containing 3B 0.0896569
COL6A3 collagen, type VI, alpha 3 0.0807392
HMGA2 high mobility group AT-hook 2 0.0800523
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0739361
FLNA filamin A, alpha 0.072273
CD44 CD44 molecule (Indian blood group) 0.0681431
NAV1 neuron navigator 1 0.0663586
MYH9 myosin, heavy chain 9, non-muscle 0.0644856
ZSWIM6 zinc finger, SWIM-type containing 6 0.063565
ATXN1 ataxin 1 0.0608741
GPC6 glypican 6 0.0600122
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0599159
VCL vinculin 0.0578607
NAV2 neuron navigator 2 0.0575731
SLC38A2 solute carrier family 38, member 2 0.0575442
ZBTB38 zinc finger and BTB domain containing 38 0.0563801
VCAN versican 0.0556028
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0538318
VEGFA vascular endothelial growth factor A 0.0509981
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0508278
TNS3 tensin 3 0.0505007
TGFBI transforming growth factor, beta-induced, 68kDa 0.0500137
EPAS1 endothelial PAS domain protein 1 0.0468401
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0461367
CD59 CD59 molecule, complement regulatory protein 0.043908
SVIL supervillin 0.0438792
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0435293
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.04272
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0424937
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0423024
MSN moesin 0.0421043
LOC112694756 uncharaterized LOC112694756 0.0419845
FLNB filamin B, beta 0.0413645
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0411559
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0398434
PLPP4 phospholipid phosphatase 4 0.0392147
RPS4X ribosomal protein S4, X-linked 0.0391008
MYOF myoferlin 0.0390726
TRIP12 thyroid hormone receptor interactor 12 0.0379662
TRIO trio Rho guanine nucleotide exchange factor 0.0371512
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0369859
LPP LIM domain containing preferred translocation partner in lipoma 0.0367049
KYNU kynureninase 0.036639
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0356243
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0352657
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0348033
CENPF centromere protein F, 350/400kDa 0.0344443
PPARD peroxisome proliferator-activated receptor delta 0.0343775
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0343667
SEPTIN9 septin 9 0.0342274
ZMIZ1 zinc finger, MIZ-type containing 1 0.0339647
MAML2 mastermind-like 2 (Drosophila) 0.0338604
ABHD12 abhydrolase domain containing 12 0.0329241
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0326725
RNF213 ring finger protein 213 0.0321875
AKAP13 A kinase (PRKA) anchor protein 13 0.0319023
TGM2 transglutaminase 2 0.0318197
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0315821
APLP2 amyloid beta (A4) precursor-like protein 2 0.0314984
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0314658
EEF2 eukaryotic translation elongation factor 2 0.0312625
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0312237
ZFAND3 zinc finger, AN1-type domain 3 0.0311194
RASAL2 RAS protein activator like 2 0.0308644
IRAK2 interleukin-1 receptor-associated kinase 2 0.0305998
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0305708
MCL1 myeloid cell leukemia 1 0.0303106
RUNX1 runt-related transcription factor 1 0.0301495
BPTF bromodomain PHD finger transcription factor 0.0299122
FMN1 formin 1 0.0295146
SFTPA2 surfactant protein A2 0.0294493
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0293945
USP9X ubiquitin specific peptidase 9, X-linked 0.0292317
SYNJ2 synaptojanin 2 0.0292125
ACTN1 actinin, alpha 1 0.0290114
LDHA lactate dehydrogenase A 0.0289201
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.02885
JMJD1C jumonji domain containing 1C 0.0284424
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0284263
UBASH3B ubiquitin associated and SH3 domain containing B 0.0284218
PTPRK protein tyrosine phosphatase, receptor type, K 0.0278945
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0278112
MED13L mediator complex subunit 13-like 0.0277908
ANXA2 annexin A2 0.0277406
BCAR3 breast cancer anti-estrogen resistance 3 0.0277041
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0275977
HIPK2 homeodomain interacting protein kinase 2 0.0275459
TPM1 tropomyosin 1 (alpha) 0.0267292
DUSP10 dual specificity phosphatase 10 0.0265739

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.129432
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.121546
SOD2 superoxide dismutase 2, mitochondrial -0.0622293
MT2A metallothionein 2A -0.0592737
CANX calnexin -0.0531556
PTMA prothymosin, alpha -0.0521558
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0475502
IER3 immediate early response 3 -0.0453218
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0422929
TPT1 tumor protein, translationally-controlled 1 -0.0417649
EIF1 eukaryotic translation initiation factor 1 -0.0367044
BTG1 B-cell translocation gene 1, anti-proliferative -0.0365128
KDM3A lysine (K)-specific demethylase 3A -0.0360653
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0325435
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0312674
GOLGA4 golgin A4 -0.0311566
ADM adrenomedullin -0.0310748
AFF3 AF4/FMR2 family, member 3 -0.0308702
HLA-E major histocompatibility complex, class I, E -0.0299118
WSB1 WD repeat and SOCS box containing 1 -0.0291207
HLA-B major histocompatibility complex, class I, B -0.0289537
PDE10A phosphodiesterase 10A -0.0278094
NGLY1 N-glycanase 1 -0.0276677
OGA O-GlcNAcase -0.0265393
GDF15 growth differentiation factor 15 -0.0255715
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0252266
TMSB10 thymosin beta 10 -0.0251632
ELL2 elongation factor, RNA polymerase II, 2 -0.0249502
WDFY1 WD repeat and FYVE domain containing 1 -0.0248281
ZNF292 zinc finger protein 292 -0.0245018
MXI1 MAX interactor 1, dimerization protein -0.0241364
FRMPD4 FERM and PDZ domain containing 4 -0.0238741
BACE2 beta-site APP-cleaving enzyme 2 -0.0237319
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0236395
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0233617
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0233164
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0230304
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0223092
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.022276
HILPDA hypoxia inducible lipid droplet-associated -0.021707
RPS13 ribosomal protein S13 -0.0216394
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0214227
NDRG1 N-myc downstream regulated 1 -0.0214009
RAB1A RAB1A, member RAS oncogene family -0.0212105
ABI3BP ABI family, member 3 (NESH) binding protein -0.0208735
MMP12 matrix metallopeptidase 12 -0.0208508
NT5C2 5'-nucleotidase, cytosolic II -0.0206572
FTL ferritin, light polypeptide -0.0205706
TMSB4X thymosin beta 4, X-linked -0.0205213
ANKRD10 ankyrin repeat domain 10 -0.0199701
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.019907
NAMPT nicotinamide phosphoribosyltransferase -0.0198909
FAM114A1 family with sequence similarity 114, member A1 -0.0197413
RPS3 ribosomal protein S3 -0.0196482
ESYT2 extended synaptotagmin-like protein 2 -0.0195046
RPL36A ribosomal protein L36a -0.0180487
RPL34 ribosomal protein L34 -0.0179612
BASP1 brain abundant, membrane attached signal protein 1 -0.0177715
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 -0.0174139
TTC28 tetratricopeptide repeat domain 28 -0.017218
LCORL ligand dependent nuclear receptor corepressor-like -0.0169114
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0167724
RPS29 ribosomal protein S29 -0.0166699
RPS27A ribosomal protein S27a -0.0166681
RTN3 reticulon 3 -0.0165707
USP37 ubiquitin specific peptidase 37 -0.0165543
PPP4R4 protein phosphatase 4, regulatory subunit 4 -0.0165253
RPL37A ribosomal protein L37a -0.0163115
RAI14 retinoic acid induced 14 -0.0163091
NCOA7 nuclear receptor coactivator 7 -0.0161875
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0160842
SDCBP syndecan binding protein (syntenin) -0.0160502
FAM162A family with sequence similarity 162, member A -0.0159979
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0159641
RPS6 ribosomal protein S6 -0.0159013
TCEAL9 transcription elongation factor A like 9 -0.015393
HLA-A major histocompatibility complex, class I, A -0.0149078
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0145983
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0145825
RLF rearranged L-myc fusion -0.0145747
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0145483
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0145363
ARFGEF3 ARFGEF family member 3 -0.0143093
RPL36 ribosomal protein L36 -0.0141632
FOXO3 forkhead box O3 -0.0141043
RPS15 ribosomal protein S15 -0.014018
CEP95 centrosomal protein 95kDa -0.0140026
SLC38A1 solute carrier family 38, member 1 -0.0139546
RND3 Rho family GTPase 3 -0.0139058
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0138747
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0138086
CADM1 cell adhesion molecule 1 -0.0138
USP53 ubiquitin specific peptidase 53 -0.0136807
RPL35A ribosomal protein L35a -0.0135883
HM13 histocompatibility (minor) 13 -0.0132701
THBS2 thrombospondin 2 -0.0131266
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) -0.0131006
TBCA tubulin folding cofactor A -0.0128667
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0128032
PGM3 phosphoglucomutase 3 -0.0127563