Lipoic acid_Hs 766T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lipoic acid perturbation in Hs 766T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lipoic acid_Hs 766T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.160272
IGF2 insulin-like growth factor 2 0.0786295
MBNL2 muscleblind-like splicing regulator 2 0.0728011
ESYT2 extended synaptotagmin-like protein 2 0.069551
ITCH itchy E3 ubiquitin protein ligase 0.0661618
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0649112
NDRG1 N-myc downstream regulated 1 0.0591203
PTK2 protein tyrosine kinase 2 0.0586142
TGM2 transglutaminase 2 0.0541309
AKAP9 A kinase (PRKA) anchor protein 9 0.0532593
TXNIP thioredoxin interacting protein 0.0528671
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0520718
RAI14 retinoic acid induced 14 0.0516102
FNDC3B fibronectin type III domain containing 3B 0.0497389
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0491192
DST dystonin 0.0479199
PODXL podocalyxin-like 0.0473599
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.047127
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0469975
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0466381
MTSS1 metastasis suppressor 1 0.045425
FTH1 ferritin, heavy polypeptide 1 0.0453339
TTC3 tetratricopeptide repeat domain 3 0.0447732
TRAM1 translocation associated membrane protein 1 0.0422767
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0419828
BARX2 BARX homeobox 2 0.0419764
CDKN2A cyclin-dependent kinase inhibitor 2A 0.0414419
FRMD6 FERM domain containing 6 0.039396
EPS8 epidermal growth factor receptor pathway substrate 8 0.0384669
MBNL1 muscleblind-like splicing regulator 1 0.0376401
COG6 component of oligomeric golgi complex 6 0.0367209
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0365319
SLK STE20-like kinase 0.0359496
UBE2H ubiquitin-conjugating enzyme E2H 0.0353313
RICTOR RPTOR independent companion of MTOR, complex 2 0.0352736
DOCK9 dedicator of cytokinesis 9 0.0352409
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0344372
NUCB2 nucleobindin 2 0.0342329
PDLIM1 PDZ and LIM domain 1 0.0337757
NCOR2 nuclear receptor corepressor 2 0.0333529
DOCK5 dedicator of cytokinesis 5 0.0332126
ANKRD28 ankyrin repeat domain 28 0.0329182
WASF2 WAS protein family, member 2 0.0327431
BCAR3 breast cancer anti-estrogen resistance 3 0.0322674
RAB6A RAB6A, member RAS oncogene family 0.0320237
TMF1 TATA element modulatory factor 1 0.0316322
LRRC8C leucine rich repeat containing 8 family, member C 0.0310093
ATM ATM serine/threonine kinase 0.0307326
MAP4 microtubule-associated protein 4 0.0304445
BCL2L1 BCL2-like 1 0.0302563
FNIP1 folliculin interacting protein 1 0.0300883
GOLGB1 golgin B1 0.03003
SQLE squalene epoxidase 0.029879
SPIRE1 spire-type actin nucleation factor 1 0.0294939
EZR ezrin 0.0294237
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0293547
CALB1 calbindin 1, 28kDa 0.0291526
TSC22D1 TSC22 domain family, member 1 0.0285251
CMIP c-Maf inducing protein 0.0284585
USO1 USO1 vesicle transport factor 0.0283849
GOLGA4 golgin A4 0.0280227
MEF2A myocyte enhancer factor 2A 0.0278956
HSD17B2 hydroxysteroid (17-beta) dehydrogenase 2 0.0277394
KIF16B kinesin family member 16B 0.0277274
VEGFA vascular endothelial growth factor A 0.0277067
CLU clusterin 0.0274977
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0274061
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0273681
ELL2 elongation factor, RNA polymerase II, 2 0.0270815
ITGB4 integrin, beta 4 0.0269484
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0265497
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0261715
COG5 component of oligomeric golgi complex 5 0.026107
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0260643
N4BP2L2 NEDD4 binding protein 2-like 2 0.0258162
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0257938
RNF217 ring finger protein 217 0.0257497
LAMA5 laminin, alpha 5 0.0256144
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0251796
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0249122
VEGFC vascular endothelial growth factor C 0.0248457
RAB22A RAB22A, member RAS oncogene family 0.0247861
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0247368
DSPP dentin sialophosphoprotein 0.0245433
CEMIP cell migration inducing protein, hyaluronan binding 0.0245289
IRAK2 interleukin-1 receptor-associated kinase 2 0.0245092
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0244769
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.024169
UBN2 ubinuclein 2 0.0237008
PGM3 phosphoglucomutase 3 0.0235847
ITGAV integrin, alpha V 0.0235165
SEPTIN9 septin 9 0.0235165
FAM107B family with sequence similarity 107, member B 0.0230549
GPR176 G protein-coupled receptor 176 0.022958
MPRIP myosin phosphatase Rho interacting protein 0.0227661
WEE1 WEE1 G2 checkpoint kinase 0.0224874
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0224727
RNF145 ring finger protein 145 0.0223613
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0223362
SLTM SAFB-like, transcription modulator 0.0220917

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.127056
AHNAK AHNAK nucleoprotein -0.12573
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.12193
TPT1 tumor protein, translationally-controlled 1 -0.115756
RIGI RNA sensor RIG-I -0.107525
TIMP3 TIMP metallopeptidase inhibitor 3 -0.106913
TMSB4X thymosin beta 4, X-linked -0.0896334
PTMA prothymosin, alpha -0.0882148
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0838385
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0834918
UBC ubiquitin C -0.0818175
RPS21 ribosomal protein S21 -0.072894
TMSB10 thymosin beta 10 -0.0698155
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0697699
RPS8 ribosomal protein S8 -0.066411
STC1 stanniocalcin 1 -0.0645531
RPS24 ribosomal protein S24 -0.062756
VCL vinculin -0.0627304
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0620227
B2M beta-2-microglobulin -0.0617846
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0616844
ACTN4 actinin, alpha 4 -0.0611612
RPS27A ribosomal protein S27a -0.0606118
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0602113
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0599554
KIAA1217 KIAA1217 -0.057531
ABI3BP ABI family, member 3 (NESH) binding protein -0.0575281
KRT17 keratin 17, type I -0.0567997
RPL23 ribosomal protein L23 -0.0557826
ENO1 enolase 1, (alpha) -0.0545676
NAP1L1 nucleosome assembly protein 1-like 1 -0.0540318
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0525449
SQSTM1 sequestosome 1 -0.0522036
DPYD dihydropyrimidine dehydrogenase -0.0513699
EGR1 early growth response 1 -0.0513447
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0494749
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0494127
RPL11 ribosomal protein L11 -0.0493389
SULF1 sulfatase 1 -0.0493002
ACTG1 actin gamma 1 -0.0489581
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0486969
FLNA filamin A, alpha -0.0484247
RAB7A RAB7A, member RAS oncogene family -0.0475098
RPL19 ribosomal protein L19 -0.0468436
RPLP1 ribosomal protein, large, P1 -0.0457525
RPS3 ribosomal protein S3 -0.0441405
POTEF POTE ankyrin domain family, member F -0.0433621
NEK7 NIMA-related kinase 7 -0.0426833
MYH9 myosin, heavy chain 9, non-muscle -0.0422267
RPLP2 ribosomal protein, large, P2 -0.0420824
HLA-B major histocompatibility complex, class I, B -0.0420276
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0412995
S100A10 S100 calcium binding protein A10 -0.0411166
FN1 fibronectin 1 -0.0403232
PITPNB phosphatidylinositol transfer protein, beta -0.0402683
ZNFX1 zinc finger, NFX1-type containing 1 -0.0399672
SAMD9 sterile alpha motif domain containing 9 -0.0399415
NAMPT nicotinamide phosphoribosyltransferase -0.0386617
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0386042
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0375544
ANKRD33B ankyrin repeat domain 33B -0.0375467
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0359138
RPS12 ribosomal protein S12 -0.0357834
C4BPB complement component 4 binding protein, beta -0.0357195
LMNA lamin A/C -0.0354514
SET SET nuclear proto-oncogene -0.0348628
LOC112694756 uncharaterized LOC112694756 -0.0347513
SMYD3 SET and MYND domain containing 3 -0.0342458
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0342176
RPL37A ribosomal protein L37a -0.0341895
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0341138
IER3 immediate early response 3 -0.0335964
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0335867
RPL37 ribosomal protein L37 -0.0334425
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0333833
MT2A metallothionein 2A -0.0332611
TM4SF1 transmembrane 4 L six family member 1 -0.032893
EMP1 epithelial membrane protein 1 -0.0327158
TPX2 TPX2, microtubule-associated -0.0327039
FOXP1 forkhead box P1 -0.0326571
RPL34 ribosomal protein L34 -0.0325125
GNAS GNAS complex locus -0.0325122
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0324847
YBX3 Y box binding protein 3 -0.0323763
RPS25 ribosomal protein S25 -0.0323398
SDCBP syndecan binding protein (syntenin) -0.0318813
PDLIM5 PDZ and LIM domain 5 -0.0314449
RPL9 ribosomal protein L9 -0.0310889
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0308001
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0304729
RPS13 ribosomal protein S13 -0.0304679
SOX13 SRY (sex determining region Y)-box 13 -0.0301097
RPL26 ribosomal protein L26 -0.0301066
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0300367
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0299274
CENPF centromere protein F, 350/400kDa -0.0297589
CAV1 caveolin 1, caveolae protein, 22kDa -0.0295442
IRF1 interferon regulatory factor 1 -0.0291134
RPL7A ribosomal protein L7a -0.0287833
HMGB1 high mobility group box 1 -0.0284812