Lomitapide Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
Description A member of the class of benzamides obtained by formal condensation of the carboxy group of 4'-(trifluoromethyl)biphenyl-2-carboxylic acid with the primary amino group of 9-[4-(4-aminopiperidin-1-yl)butyl]-N-(2,2,2-trifluoroethyl)-9H-fluorene-9-carboxamide. Used (as its mesylate salt) as a complement to a low-fat diet and other lipid-lowering treatments in patients with homozygous familial hypercholesterolemia. (Chemical Entities of Biological Interest Ontology, CHEBI_72297)
External Link https://pubchem.ncbi.nlm.nih.gov/compound/9853053
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Genes

197 proteins with high or low expression in Lomitapide relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
RNF111 ring finger protein 111 2.47
PER2 period circadian clock 2 2.07
GJC1 gap junction protein, gamma 1, 45kDa 1.46
TTLL4 tubulin tyrosine ligase-like family member 4 1.06
SEMG1 semenogelin I 0.88
MSANTD2 Myb/SANT-like DNA-binding domain containing 2 0.86
TPM1 tropomyosin 1 (alpha) 0.79
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3 0.63
SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 0.6
SLC37A1 solute carrier family 37 (glucose-6-phosphate transporter), member 1 0.58
BHLHA15 basic helix-loop-helix family, member a15 0.56
DNAH2 dynein, axonemal, heavy chain 2 0.54
ZNF367 zinc finger protein 367 0.54
CYBA cytochrome b-245, alpha polypeptide 0.52
PRELID1 PRELI domain containing 1 0.52
FGG fibrinogen gamma chain 0.46
LAPTM4A lysosomal protein transmembrane 4 alpha 0.45
PRELID3B PRELI domain containing 3B 0.45
SUMO2 small ubiquitin-like modifier 2 0.45
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.44
SON SON DNA binding protein 0.42
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A 0.42
APOB apolipoprotein B 0.41
ABCA13 ATP-binding cassette, sub-family A (ABC1), member 13 0.41
PLEKHA3 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 0.41
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.41
FXN frataxin 0.39
GON7 GON7 subunit of KEOPS complex 0.38
ZNF544 zinc finger protein 544 0.37
GRK5 G protein-coupled receptor kinase 5 0.37
CRELD2 cysteine-rich with EGF-like domains 2 0.35
DST dystonin 0.35
ABHD2 abhydrolase domain containing 2 0.35
GATC glutamyl-tRNA(Gln) amidotransferase, subunit C 0.34
FAM177A1 family with sequence similarity 177, member A1 0.34
HEXD hexosaminidase D 0.33
EXPH5 exophilin 5 0.32
RGN regucalcin 0.32
C12ORF66 chromosome 12 open reading frame 66 0.32
TMEM98 transmembrane protein 98 0.32
H3-3A H3.3 histone A 0.32
FITM2 fat storage-inducing transmembrane protein 2 0.31
MPDZ multiple PDZ domain protein 0.31
MCTP2 multiple C2 domains, transmembrane 2 0.31
PARD6A par-6 family cell polarity regulator alpha 0.3
CYB5D2 cytochrome b5 domain containing 2 0.3
PRKCH protein kinase C, eta 0.3
TIAM2 T-cell lymphoma invasion and metastasis 2 0.3
ROGDI rogdi homolog (Drosophila) 0.29
DENND5A DENN/MADD domain containing 5A 0.29
ZNF124 zinc finger protein 124 0.29
ALAS1 5'-aminolevulinate synthase 1 0.29
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 0.28
TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 0.28
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 0.28
TMPO thymopoietin 0.28
MSX2 msh homeobox 2 0.28
CA3 carbonic anhydrase III 0.28
SIVA1 SIVA1, apoptosis-inducing factor 0.28
NEIL1 nei endonuclease VIII-like 1 (E. coli) 0.28
PLD6 phospholipase D family, member 6 0.28
CBY1 chibby homolog 1 (Drosophila) 0.28
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 0.27
FN1 fibronectin 1 0.27
HOXB4 homeobox B4 0.27
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 0.27
EVL Enah/Vasp-like 0.26
CADPS Ca++-dependent secretion activator 0.26
ASB1 ankyrin repeat and SOCS box containing 1 0.26
SPIRE2 spire-type actin nucleation factor 2 0.26
MYBPC1 myosin binding protein C, slow type 0.26
MPV17L2 MPV17 mitochondrial membrane protein-like 2 0.26
SREBF1 sterol regulatory element binding transcription factor 1 0.26
RAB30 RAB30, member RAS oncogene family 0.25
SPRTN SprT-like N-terminal domain 0.25
GDF15 growth differentiation factor 15 0.25
SCRN3 secernin 3 0.25
RGS20 regulator of G-protein signaling 20 0.25
MAZ MYC-associated zinc finger protein (purine-binding transcription factor) 0.25
ITPKB inositol-trisphosphate 3-kinase B 0.25
USP33 ubiquitin specific peptidase 33 0.25
GABPB1 GA binding protein transcription factor, beta subunit 1 0.25
BSDC1 BSD domain containing 1 0.25
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast) 0.25
CCDC110 coiled-coil domain containing 110 0.25
ZC3H12C zinc finger CCCH-type containing 12C 0.24
H1-4 H1.4 linker histone, cluster member 0.24
COMMD5 COMM domain containing 5 0.24
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 0.24
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme 0.24
PICK1 protein interacting with PRKCA 1 0.24
FGA fibrinogen alpha chain 0.24
NET1 neuroepithelial cell transforming 1 0.23
H2AFX H2A histone family, member X 0.23
PRDX4 peroxiredoxin 4 0.23
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.23
FICD FIC domain containing 0.23
ACTBL2 actin, beta-like 2 0.23
OSBPL8 oxysterol binding protein-like 8 0.23

low expression

Symbol Name Standardized Value
CNTRL centriolin -1.85
SEZ6L2 seizure related 6 homolog (mouse)-like 2 -1.25
DAP death-associated protein -0.75
GK5 glycerol kinase 5 (putative) -0.74
RECK reversion-inducing-cysteine-rich protein with kazal motifs -0.7
NAAA N-acylethanolamine acid amidase -0.68
TACSTD2 tumor-associated calcium signal transducer 2 -0.65
PLIN2 perilipin 2 -0.62
MR1 major histocompatibility complex, class I-related -0.62
DBNL drebrin-like -0.59
MYH1 myosin, heavy chain 1, skeletal muscle, adult -0.53
PDGFC platelet derived growth factor C -0.53
ABHD18 abhydrolase domain containing 18 -0.52
RILPL2 Rab interacting lysosomal protein-like 2 -0.51
MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow -0.51
RNF145 ring finger protein 145 -0.51
TUB tubby bipartite transcription factor -0.5
BTBD3 BTB (POZ) domain containing 3 -0.48
GLT8D1 glycosyltransferase 8 domain containing 1 -0.46
FRS2 fibroblast growth factor receptor substrate 2 -0.45
MUC16 mucin 16, cell surface associated -0.44
ADARB1 adenosine deaminase, RNA-specific, B1 -0.44
LIPA lipase A, lysosomal acid, cholesterol esterase -0.43
PLSCR1 phospholipid scramblase 1 -0.43
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1 -0.42
RHBDF1 rhomboid 5 homolog 1 (Drosophila) -0.41
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 -0.41
RABAC1 Rab acceptor 1 (prenylated) -0.39
E2F1 E2F transcription factor 1 -0.39
HAL histidine ammonia-lyase -0.39
GSTA1 glutathione S-transferase alpha 1 -0.39
HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 -0.38
TMX2 thioredoxin-related transmembrane protein 2 -0.38
B9D1 B9 protein domain 1 -0.38
NAP1L1 nucleosome assembly protein 1-like 1 -0.37
ALDH1L1 aldehyde dehydrogenase 1 family, member L1 -0.37
POLE4 polymerase (DNA-directed), epsilon 4, accessory subunit -0.37
CUTA cutA divalent cation tolerance homolog (E. coli) -0.36
TMEM184A transmembrane protein 184A -0.36
ZNF189 zinc finger protein 189 -0.35
ABHD17C abhydrolase domain containing 17C -0.35
BCL6 B-cell CLL/lymphoma 6 -0.35
TTYH3 tweety family member 3 -0.35
PSAP prosaposin -0.35
ALDH1L2 aldehyde dehydrogenase 1 family, member L2 -0.35
CREBZF CREB/ATF bZIP transcription factor -0.33
TGOLN2 trans-golgi network protein 2 -0.33
TSPAN31 tetraspanin 31 -0.32
ACTN2 actinin, alpha 2 -0.32
CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 -0.32
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor -0.31
TTC3 tetratricopeptide repeat domain 3 -0.31
FGB fibrinogen beta chain -0.31
ANGPTL4 angiopoietin-like 4 -0.31
DCLRE1B DNA cross-link repair 1B -0.3
NPHP3 nephronophthisis 3 (adolescent) -0.3
ADAM22 ADAM metallopeptidase domain 22 -0.3
ADGRE2 adhesion G protein-coupled receptor E2 -0.29
LAMP2 lysosomal-associated membrane protein 2 -0.29
BMPR1A bone morphogenetic protein receptor, type IA -0.29
GID8 GID complex subunit 8 -0.29
MARVELD3 MARVEL domain containing 3 -0.29
PCTP phosphatidylcholine transfer protein -0.29
SYT17 synaptotagmin XVII -0.28
MTRF1L mitochondrial translational release factor 1-like -0.28
MSX1 msh homeobox 1 -0.28
ARL8A ADP-ribosylation factor-like 8A -0.28
NDRG2 NDRG family member 2 -0.28
SH2B3 SH2B adaptor protein 3 -0.28
ITFG2 integrin alpha FG-GAP repeat containing 2 -0.28
ADIRF adipogenesis regulatory factor -0.28
RMI2 RecQ mediated genome instability 2 -0.28
FAM110A family with sequence similarity 110, member A -0.28
NME6 NME/NM23 nucleoside diphosphate kinase 6 -0.28
ARSG arylsulfatase G -0.28
EPN3 epsin 3 -0.28
R3HCC1L R3H domain and coiled-coil containing 1-like -0.28
ELF4 E74-like factor 4 (ets domain transcription factor) -0.27
MKNK2 MAP kinase interacting serine/threonine kinase 2 -0.27
BCAM basal cell adhesion molecule (Lutheran blood group) -0.27
F10 coagulation factor X -0.27
ZNF417 zinc finger protein 417 -0.27
LZTS1 leucine zipper, putative tumor suppressor 1 -0.27
PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 -0.27
LIPT1 lipoyltransferase 1 -0.27
HMBOX1 homeobox containing 1 -0.26
OTC ornithine carbamoyltransferase -0.26
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae) -0.26
TMEM63A transmembrane protein 63A -0.26
INO80B INO80 complex subunit B -0.26
STARD10 StAR-related lipid transfer (START) domain containing 10 -0.26
HTD2 hydroxyacyl-thioester dehydratase type 2 -0.26
ACTL8 actin-like 8 -0.25
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.25
MLYCD malonyl-CoA decarboxylase -0.25
CRCP CGRP receptor component -0.25
PLEKHG5 pleckstrin homology domain containing, family G (with RhoGef domain) member 5 -0.25
PPT1 palmitoyl-protein thioesterase 1 -0.25