Lopinavir_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lopinavir perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lopinavir_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0784879
CES1 carboxylesterase 1 0.0764882
MCL1 myeloid cell leukemia 1 0.0697459
DTNA dystrobrevin, alpha 0.0621414
MYH9 myosin, heavy chain 9, non-muscle 0.0492106
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0472665
AGO2 argonaute RISC catalytic component 2 0.0451068
TBC1D22A TBC1 domain family, member 22A 0.0404703
RUNX1 runt-related transcription factor 1 0.0392078
ATP13A3 ATPase type 13A3 0.0389118
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0387488
MKI67 marker of proliferation Ki-67 0.0352923
SOD2 superoxide dismutase 2, mitochondrial 0.0336375
SAMD4A sterile alpha motif domain containing 4A 0.0333108
GPATCH2L G patch domain containing 2-like 0.0289964
UBA6 ubiquitin-like modifier activating enzyme 6 0.0283554
CAMTA1 calmodulin binding transcription activator 1 0.0277967
ELL2 elongation factor, RNA polymerase II, 2 0.0275394
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0258156
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0257331
SRRM2 serine/arginine repetitive matrix 2 0.025498
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0251307
RTN4 reticulon 4 0.0249515
NGLY1 N-glycanase 1 0.0248863
RASA2 RAS p21 protein activator 2 0.0245313
ATP11A ATPase, class VI, type 11A 0.0243661
ZC3H11A zinc finger CCCH-type containing 11A 0.0241064
WDR26 WD repeat domain 26 0.0233865
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0229251
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.022711
FAM110C family with sequence similarity 110, member C 0.0223437
MSN moesin 0.0216299
LAMA4 laminin, alpha 4 0.0212424
IGSF9B immunoglobulin superfamily, member 9B 0.0207844
TOP1 topoisomerase (DNA) I 0.0205311
TSC22D2 TSC22 domain family, member 2 0.0200859
PLEC plectin 0.0198824
EEF2 eukaryotic translation elongation factor 2 0.0195726
ARGLU1 arginine and glutamate rich 1 0.0193422
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0190635
ANKRD11 ankyrin repeat domain 11 0.0189045
CDCP1 CUB domain containing protein 1 0.0188348
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 0.0183291
CSNK1E casein kinase 1, epsilon 0.0182712
YEATS2 YEATS domain containing 2 0.0180853
NPC1 Niemann-Pick disease, type C1 0.0180766
RNF169 ring finger protein 169 0.0176905
FBXL5 F-box and leucine-rich repeat protein 5 0.0174636
USP34 ubiquitin specific peptidase 34 0.0174337
JAM3 junctional adhesion molecule 3 0.0168962
RPL3 ribosomal protein L3 0.0168395
PCBP2 poly(rC) binding protein 2 0.0166343
HYOU1 hypoxia up-regulated 1 0.0165631
KLC1 kinesin light chain 1 0.0164912
SLC35F5 solute carrier family 35, member F5 0.0164533
CCNG2 cyclin G2 0.0163645
ZNF638 zinc finger protein 638 0.0163472
SPRED2 sprouty-related, EVH1 domain containing 2 0.016346
GSK3B glycogen synthase kinase 3 beta 0.015871
BMP6 bone morphogenetic protein 6 0.0157611
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0157055
PRELID2 PRELI domain containing 2 0.0156695
METTL15 methyltransferase like 15 0.0156014
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0154186
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0152892
FRY furry homolog (Drosophila) 0.0152503
VEZT vezatin, adherens junctions transmembrane protein 0.0150364
SNX9 sorting nexin 9 0.0146596
PUM2 pumilio RNA-binding family member 2 0.0145112
MYO1B myosin IB 0.0144756
PYGL phosphorylase, glycogen, liver 0.0144107
RLIM ring finger protein, LIM domain interacting 0.0143821
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.0142531
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0141249
UHMK1 U2AF homology motif (UHM) kinase 1 0.0141096
RPL4 ribosomal protein L4 0.0138697
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0138252
ZFAND6 zinc finger, AN1-type domain 6 0.0137678
HOOK2 hook microtubule-tethering protein 2 0.0137306
LRRC8C leucine rich repeat containing 8 family, member C 0.0136466
RNF149 ring finger protein 149 0.0134422
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0132882
ZNF148 zinc finger protein 148 0.0131804
MAST4 microtubule associated serine/threonine kinase family member 4 0.0131202
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0131048
WDR49 WD repeat domain 49 0.0129656
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0128981
CUL4A cullin 4A 0.0127755
COG5 component of oligomeric golgi complex 5 0.0126273
COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) 0.0125624
ZFC3H1 zinc finger, C3H1-type containing 0.0125575
TMEM167A transmembrane protein 167A 0.0125012
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0124697
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0123545
MAP2K1 mitogen-activated protein kinase kinase 1 0.0121448
ADAM17 ADAM metallopeptidase domain 17 0.0121318
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0120134
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0120115
BIRC2 baculoviral IAP repeat containing 2 0.0119134
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 0.0118816

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.192128
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.190868
ASPH aspartate beta-hydroxylase -0.172032
LMO7 LIM domain 7 -0.139898
PTPRM protein tyrosine phosphatase, receptor type, M -0.121506
CAV1 caveolin 1, caveolae protein, 22kDa -0.120306
TMSB10 thymosin beta 10 -0.0981993
TXNRD1 thioredoxin reductase 1 -0.088518
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0884927
ANXA2 annexin A2 -0.0839913
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0810874
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0796969
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0752559
ZMYND8 zinc finger, MYND-type containing 8 -0.0714602
FNDC3B fibronectin type III domain containing 3B -0.0713856
PTMA prothymosin, alpha -0.0713517
EGR1 early growth response 1 -0.0702474
LDHA lactate dehydrogenase A -0.0681445
ACTG1 actin gamma 1 -0.066773
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0656501
S100A10 S100 calcium binding protein A10 -0.0652563
LRP1B low density lipoprotein receptor-related protein 1B -0.0620075
AKR1C1 aldo-keto reductase family 1, member C1 -0.0617565
RNF213 ring finger protein 213 -0.0614377
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0549113
NDRG1 N-myc downstream regulated 1 -0.054813
SLC38A1 solute carrier family 38, member 1 -0.0540378
THSD4 thrombospondin, type I, domain containing 4 -0.0530914
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0530903
IGFBP3 insulin-like growth factor binding protein 3 -0.0527168
MYOF myoferlin -0.0495118
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0489147
CCND1 cyclin D1 -0.0483831
IGFBP5 insulin-like growth factor binding protein 5 -0.0468075
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0460367
KRT7 keratin 7, type II -0.0451262
B2M beta-2-microglobulin -0.0449333
KRT18 keratin 18, type I -0.0446042
EFNA5 ephrin-A5 -0.0423374
TPT1 tumor protein, translationally-controlled 1 -0.042291
CST3 cystatin C -0.0416384
EGFR epidermal growth factor receptor -0.0410288
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0408973
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0389255
LIMCH1 LIM and calponin homology domains 1 -0.0387537
BZW1 basic leucine zipper and W2 domains 1 -0.038673
STC1 stanniocalcin 1 -0.0386589
ENO1 enolase 1, (alpha) -0.0363847
AHNAK AHNAK nucleoprotein -0.0363627
HLA-B major histocompatibility complex, class I, B -0.0360245
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0354818
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0350889
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0347241
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0345797
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0344775
NCOA3 nuclear receptor coactivator 3 -0.0337985
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0334171
NCOA7 nuclear receptor coactivator 7 -0.0333429
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0332694
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.033253
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.03298
IFI6 interferon, alpha-inducible protein 6 -0.0329054
LPP LIM domain containing preferred translocation partner in lipoma -0.0328192
GNAS GNAS complex locus -0.0327736
TRIM56 tripartite motif containing 56 -0.0321373
PKM pyruvate kinase, muscle -0.0320688
MAML3 mastermind-like 3 (Drosophila) -0.0315964
CXCL8 chemokine (C-X-C motif) ligand 8 -0.031596
FTL ferritin, light polypeptide -0.0306496
H1-0 H1.0 linker histone -0.0306023
RAB27B RAB27B, member RAS oncogene family -0.0305066
TPM4 tropomyosin 4 -0.0304613
CPE carboxypeptidase E -0.0300903
FAM13A family with sequence similarity 13, member A -0.0300089
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0299816
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0291498
DSPP dentin sialophosphoprotein -0.0287011
PARD3 par-3 family cell polarity regulator -0.0286284
S100A6 S100 calcium binding protein A6 -0.0284902
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0279388
PDE8A phosphodiesterase 8A -0.0279285
AHNAK2 AHNAK nucleoprotein 2 -0.0279257
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0278678
CAV2 caveolin 2 -0.0278548
GCLC glutamate-cysteine ligase, catalytic subunit -0.0278302
EZR ezrin -0.0277837
SQSTM1 sequestosome 1 -0.0276185
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.026671
KLF5 Kruppel-like factor 5 (intestinal) -0.0263274
SP100 SP100 nuclear antigen -0.0263205
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0261946
IER3 immediate early response 3 -0.0261787
CUX1 cut-like homeobox 1 -0.026169
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0261567
AKAP12 A kinase (PRKA) anchor protein 12 -0.0260687
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0253881
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 -0.0253615
DSG2 desmoglein 2 -0.0251804
KDM3A lysine (K)-specific demethylase 3A -0.024918
S100A11 S100 calcium binding protein A11 -0.0245869