Lucanthone_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.107742
SOD2 superoxide dismutase 2, mitochondrial 0.0581412
FNDC3B fibronectin type III domain containing 3B 0.0571016
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0534269
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0514062
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0492121
APP amyloid beta (A4) precursor protein 0.0459918
COL3A1 collagen, type III, alpha 1 0.045548
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0445993
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0437165
TMSB4X thymosin beta 4, X-linked 0.0434759
ATP13A3 ATPase type 13A3 0.0429869
MT2A metallothionein 2A 0.0401681
TNIP1 TNFAIP3 interacting protein 1 0.0394646
HLA-B major histocompatibility complex, class I, B 0.0388744
WWTR1 WW domain containing transcription regulator 1 0.0384451
RTN4 reticulon 4 0.0383176
PRRC2C proline-rich coiled-coil 2C 0.0378825
TPM3 tropomyosin 3 0.0367917
PLAT plasminogen activator, tissue 0.0348018
NAV1 neuron navigator 1 0.0331411
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0317464
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0300638
MTSS1 metastasis suppressor 1 0.029438
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0280133
FCHSD2 FCH and double SH3 domains 2 0.027258
PTMA prothymosin, alpha 0.0268704
B2M beta-2-microglobulin 0.0267512
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0265197
ZNF292 zinc finger protein 292 0.0257594
GLS2 glutaminase 2 (liver, mitochondrial) 0.0255017
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0254947
AUTS2 autism susceptibility candidate 2 0.025337
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0251615
GOLGA4 golgin A4 0.024862
RLF rearranged L-myc fusion 0.0248278
TXNRD1 thioredoxin reductase 1 0.0243781
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0242011
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0234796
HLA-C major histocompatibility complex, class I, C 0.0232281
OGA O-GlcNAcase 0.0228342
AFAP1 actin filament associated protein 1 0.0227751
ABTB3 ankyrin repeat and BTB domain containing 3 0.0226789
DPYSL3 dihydropyrimidinase-like 3 0.0225604
RBM39 RNA binding motif protein 39 0.022489
FTH1 ferritin, heavy polypeptide 1 0.0224224
PLEC plectin 0.0222816
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0221404
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0220623
TUSC3 tumor suppressor candidate 3 0.0220539
DENND5A DENN/MADD domain containing 5A 0.0220444
PRKD3 protein kinase D3 0.0218136
PSD3 pleckstrin and Sec7 domain containing 3 0.0211936
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0211477
SKP1 S-phase kinase-associated protein 1 0.0211411
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0211004
BIRC2 baculoviral IAP repeat containing 2 0.0209999
EPN2 epsin 2 0.0209861
LHFPL6 LHFPL tetraspan subfamily member 6 0.020795
ANKRD10 ankyrin repeat domain 10 0.0207741
TSPAN9 tetraspanin 9 0.0207586
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0207346
ANKRD33B ankyrin repeat domain 33B 0.0206776
WTAP Wilms tumor 1 associated protein 0.0206101
COL1A2 collagen, type I, alpha 2 0.0204552
MRTFA myocardin related transcription factor A 0.0204301
USP34 ubiquitin specific peptidase 34 0.0201355
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0200179
FBXL20 F-box and leucine-rich repeat protein 20 0.0197795
PNRC1 proline-rich nuclear receptor coactivator 1 0.0197585
RRBP1 ribosome binding protein 1 0.019565
NAMPT nicotinamide phosphoribosyltransferase 0.0193722
HLA-E major histocompatibility complex, class I, E 0.0193585
UIMC1 ubiquitin interaction motif containing 1 0.0193566
STX1A syntaxin 1A (brain) 0.0192386
STC1 stanniocalcin 1 0.0191518
USP47 ubiquitin specific peptidase 47 0.0190896
ARHGAP5 Rho GTPase activating protein 5 0.0190444
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0190028
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0188944
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0188781
FBN1 fibrillin 1 0.0188223
RPL37A ribosomal protein L37a 0.0187568
NCOA1 nuclear receptor coactivator 1 0.0187033
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0186692
KDM3A lysine (K)-specific demethylase 3A 0.0185921
RICTOR RPTOR independent companion of MTOR, complex 2 0.0182471
SUB1 SUB1 homolog (S. cerevisiae) 0.0182432
NFE2L2 nuclear factor, erythroid 2-like 2 0.0181745
ADAM19 ADAM metallopeptidase domain 19 0.0181101
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0179081
S100A4 S100 calcium binding protein A4 0.0179044
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme 0.0178174
HIBCH 3-hydroxyisobutyryl-CoA hydrolase 0.0177648
VCL vinculin 0.0177284
NFE2L1 nuclear factor, erythroid 2-like 1 0.0177133
BLTP3B bridge-like lipid transfer protein family member 3B 0.0176929
CFLAR CASP8 and FADD-like apoptosis regulator 0.017686
GPC6 glypican 6 0.0175532
SECISBP2L SECIS binding protein 2-like 0.0175317

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.172177
IGFBP3 insulin-like growth factor binding protein 3 -0.155446
NDRG1 N-myc downstream regulated 1 -0.132398
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.127366
COL8A1 collagen, type VIII, alpha 1 -0.11612
LOX lysyl oxidase -0.107493
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.107253
COL5A1 collagen, type V, alpha 1 -0.101039
DLG1 discs, large homolog 1 (Drosophila) -0.0919659
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0903905
PODXL podocalyxin-like -0.0829759
CANX calnexin -0.0824341
TRIO trio Rho guanine nucleotide exchange factor -0.0821494
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0755606
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0695166
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0690125
CDH13 cadherin 13 -0.066872
EGFR epidermal growth factor receptor -0.0654615
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.063439
SLC39A11 solute carrier family 39, member 11 -0.0589242
CD109 CD109 molecule -0.0579828
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0572872
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0572368
ABI3BP ABI family, member 3 (NESH) binding protein -0.0562211
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0553304
PRELID2 PRELI domain containing 2 -0.0546432
COL5A2 collagen, type V, alpha 2 -0.0539616
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.0525184
PKM pyruvate kinase, muscle -0.0486441
CENPF centromere protein F, 350/400kDa -0.0484195
RIGI RNA sensor RIG-I -0.0478955
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0475393
SP100 SP100 nuclear antigen -0.0470095
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0465932
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0465262
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0462067
INTS6 integrator complex subunit 6 -0.045423
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0449321
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0439562
TTC3 tetratricopeptide repeat domain 3 -0.0434
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0427106
TAGLN2 transgelin 2 -0.0416439
PBX3 pre-B-cell leukemia homeobox 3 -0.0412974
MYADM myeloid-associated differentiation marker -0.0405709
MAP1B microtubule-associated protein 1B -0.0403594
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0394883
AHNAK AHNAK nucleoprotein -0.039476
ZBTB20 zinc finger and BTB domain containing 20 -0.0393697
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 -0.0388834
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.0378004
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0377911
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0377821
MYOF myoferlin -0.03772
FBXL7 F-box and leucine-rich repeat protein 7 -0.0351839
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0351557
MRPS6 mitochondrial ribosomal protein S6 -0.0350801
TENM3 teneurin transmembrane protein 3 -0.0349624
MACF1 microtubule-actin crosslinking factor 1 -0.0349444
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0347714
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 -0.0334652
SAMD9 sterile alpha motif domain containing 9 -0.032929
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0325578
VIM vimentin -0.0319337
LDHA lactate dehydrogenase A -0.0315811
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0315359
ENO1 enolase 1, (alpha) -0.0312425
FNDC3A fibronectin type III domain containing 3A -0.0310129
FNIP1 folliculin interacting protein 1 -0.0308951
FSTL1 follistatin-like 1 -0.0306682
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0304175
L1CAM L1 cell adhesion molecule -0.0301237
LIMCH1 LIM and calponin homology domains 1 -0.0298984
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0298295
POTEF POTE ankyrin domain family, member F -0.0297054
CUX1 cut-like homeobox 1 -0.0294103
MMP12 matrix metallopeptidase 12 -0.0290285
PEA15 phosphoprotein enriched in astrocytes 15 -0.0289667
CCND1 cyclin D1 -0.0288232
CALU calumenin -0.0286154
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0281386
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0281159
IFIH1 interferon induced with helicase C domain 1 -0.0280043
RASAL2 RAS protein activator like 2 -0.0277471
MTCL1 microtubule crosslinking factor 1 -0.0276391
PDE4D phosphodiesterase 4D, cAMP-specific -0.0274206
FN1 fibronectin 1 -0.0273816
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0272815
DCLK2 doublecortin-like kinase 2 -0.0271605
SRPK2 SRSF protein kinase 2 -0.0270736
EFNA5 ephrin-A5 -0.0270681
PFN1 profilin 1 -0.0267327
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0266491
RPTOR regulatory associated protein of MTOR, complex 1 -0.0266307
JAZF1 JAZF zinc finger 1 -0.0264187
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0262041
CDK13 cyclin-dependent kinase 13 -0.0259423
GLG1 golgi glycoprotein 1 -0.0258404
XKR6 XK, Kell blood group complex subunit-related family, member 6 -0.0255092
IARS1 isoleucyl-tRNA synthetase 1 -0.0252602
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0251979