Lucanthone_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PCDH7 protocadherin 7 0.108099
BIRC3 baculoviral IAP repeat containing 3 0.0973578
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.096493
PDE4D phosphodiesterase 4D, cAMP-specific 0.0955296
TENM3 teneurin transmembrane protein 3 0.0724378
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0717301
DST dystonin 0.069246
HMGA2 high mobility group AT-hook 2 0.0616551
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0593312
NLGN1 neuroligin 1 0.0591304
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0539142
CELF2 CUGBP, Elav-like family member 2 0.0513762
MARCHF4 membrane associated ring-CH-type finger 4 0.0512214
LMO7 LIM domain 7 0.0462797
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0460581
ANXA1 annexin A1 0.0436879
MTAP methylthioadenosine phosphorylase 0.0424955
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0408871
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0407374
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0396489
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0395846
YAP1 Yes-associated protein 1 0.0394544
GASK1B golgi associated kinase 1B 0.0390203
HSPA4 heat shock 70kDa protein 4 0.0383239
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0382538
RPL4 ribosomal protein L4 0.0381135
PDGFC platelet derived growth factor C 0.0378213
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0374378
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0354852
NEBL nebulette 0.0351888
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0341013
PPM1G protein phosphatase, Mg2+/Mn2+ dependent, 1G 0.0339163
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0331931
RIMS2 regulating synaptic membrane exocytosis 2 0.0326072
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0324274
TPM3 tropomyosin 3 0.032084
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0309935
EXOC6B exocyst complex component 6B 0.0302899
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0291227
EIF4A2 eukaryotic translation initiation factor 4A2 0.0291158
SERBP1 SERPINE1 mRNA binding protein 1 0.0290379
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.0288284
ERRFI1 ERBB receptor feedback inhibitor 1 0.0277387
EEF1G eukaryotic translation elongation factor 1 gamma 0.0270896
AHNAK AHNAK nucleoprotein 0.0264182
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0263604
RABGAP1L RAB GTPase activating protein 1-like 0.0259135
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0253177
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0250027
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0249138
PAPOLA poly(A) polymerase alpha 0.0248679
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0246273
RASAL2 RAS protein activator like 2 0.0238145
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0237916
EPHA6 EPH receptor A6 0.0236497
TXNRD1 thioredoxin reductase 1 0.0234035
ZNF804A zinc finger protein 804A 0.0233626
PHF3 PHD finger protein 3 0.0229553
MACF1 microtubule-actin crosslinking factor 1 0.0226349
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0225672
MMP12 matrix metallopeptidase 12 0.0224955
NEK7 NIMA-related kinase 7 0.0222922
EGFR epidermal growth factor receptor 0.0222624
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0222201
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0220979
AXIN2 axin 2 0.0219639
ZSWIM6 zinc finger, SWIM-type containing 6 0.0215926
CANX calnexin 0.0214714
OXR1 oxidation resistance 1 0.0212118
SRRM2 serine/arginine repetitive matrix 2 0.0211193
TMEM123 transmembrane protein 123 0.0210212
BCHE butyrylcholinesterase 0.0209895
DPYD dihydropyrimidine dehydrogenase 0.0205027
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0197766
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0197748
SUMF1 sulfatase modifying factor 1 0.0196397
SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) 0.0195423
MGAT4C MGAT4 family, member C 0.0194729
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0194366
NBEA neurobeachin 0.0193312
LGALS12 lectin, galactoside-binding, soluble, 12 0.0192098
ATP11A ATPase, class VI, type 11A 0.0191857
ZNF146 zinc finger protein 146 0.0189864
BIRC2 baculoviral IAP repeat containing 2 0.0189012
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0185137
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.0184591
SAMD4A sterile alpha motif domain containing 4A 0.0183356
SERINC1 serine incorporator 1 0.0182907
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.018164
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.01809
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0178768
AATF apoptosis antagonizing transcription factor 0.0176216
NLN neurolysin (metallopeptidase M3 family) 0.0176098
APP amyloid beta (A4) precursor protein 0.0175095
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0174722
WNK1 WNK lysine deficient protein kinase 1 0.0173584
MPG N-methylpurine-DNA glycosylase 0.0172996
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0170755
SET SET nuclear proto-oncogene 0.0169933
RUBCN rubicon autophagy regulator 0.016921

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.146465
VIM vimentin -0.137411
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.105245
FTL ferritin, light polypeptide -0.0942073
TMSB10 thymosin beta 10 -0.0656379
RAB7A RAB7A, member RAS oncogene family -0.0587292
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0534958
ATP5F1B ATP synthase F1 subunit beta -0.0508947
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0504222
RPL35A ribosomal protein L35a -0.0480369
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0454906
KPNB1 karyopherin (importin) beta 1 -0.045052
NAP1L1 nucleosome assembly protein 1-like 1 -0.0445311
TPT1 tumor protein, translationally-controlled 1 -0.0443202
RAB1A RAB1A, member RAS oncogene family -0.0433588
HSPB1 heat shock 27kDa protein 1 -0.0430219
USP34 ubiquitin specific peptidase 34 -0.042504
PFN1 profilin 1 -0.0419155
EGR1 early growth response 1 -0.041314
SMC4 structural maintenance of chromosomes 4 -0.0409973
NF1 neurofibromin 1 -0.0406018
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0402196
JMJD1C jumonji domain containing 1C -0.0394996
NIPBL Nipped-B homolog (Drosophila) -0.0378286
PCBP2 poly(rC) binding protein 2 -0.0366935
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.035751
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0353087
TMEM41B transmembrane protein 41B -0.0351543
PDIA3 protein disulfide isomerase family A, member 3 -0.0349809
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.034532
WSB1 WD repeat and SOCS box containing 1 -0.0345096
ZNF638 zinc finger protein 638 -0.0339134
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0325237
TTC3 tetratricopeptide repeat domain 3 -0.0324632
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.031874
TOP2A topoisomerase (DNA) II alpha 170kDa -0.031793
AREG amphiregulin -0.0314572
ATXN2 ataxin 2 -0.0309649
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.030515
TIPARP TCDD-inducible poly(ADP-ribose) polymerase -0.0301149
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0298981
MYL12B myosin, light chain 12B, regulatory -0.0296249
RPS6 ribosomal protein S6 -0.0295663
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0293523
S100A6 S100 calcium binding protein A6 -0.0293211
ACTG1 actin gamma 1 -0.0288919
ZNF207 zinc finger protein 207 -0.0287925
FXR1 fragile X mental retardation, autosomal homolog 1 -0.028555
DDIT3 DNA-damage-inducible transcript 3 -0.0282849
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0278736
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0278521
TUBA1B tubulin, alpha 1b -0.0278378
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0277612
VDAC1 voltage-dependent anion channel 1 -0.0277463
RSF1 remodeling and spacing factor 1 -0.0275212
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.027428
CSNK1A1 casein kinase 1, alpha 1 -0.0265195
ARF4 ADP-ribosylation factor 4 -0.0264788
GARS1 glycyl-tRNA synthetase 1 -0.0264531
SBNO1 strawberry notch homolog 1 (Drosophila) -0.0263045
VMP1 vacuole membrane protein 1 -0.0259735
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0258794
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0258012
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0257793
WAC WW domain containing adaptor with coiled-coil -0.0255533
GCG glucagon -0.0253409
PTMA prothymosin, alpha -0.0252954
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0247867
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.024531
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0242068
RPLP1 ribosomal protein, large, P1 -0.0241852
MAP1B microtubule-associated protein 1B -0.0241363
ZFAND3 zinc finger, AN1-type domain 3 -0.0241157
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.024097
AKAP9 A kinase (PRKA) anchor protein 9 -0.0239232
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0237061
CDK19 cyclin-dependent kinase 19 -0.0233702
PDK4 pyruvate dehydrogenase kinase, isozyme 4 -0.0231745
DCAF6 DDB1 and CUL4 associated factor 6 -0.0230048
FBXO11 F-box protein 11 -0.0228201
SLC38A1 solute carrier family 38, member 1 -0.0226209
GNAS GNAS complex locus -0.0225684
TRA2B transformer 2 beta homolog (Drosophila) -0.0224501
CDC27 cell division cycle 27 -0.022426
CAMKMT calmodulin-lysine N-methyltransferase -0.0222776
LOC102724023 ES1 protein homolog, mitochondrial -0.0220959
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.022067
RBM39 RNA binding motif protein 39 -0.022044
R3HDM1 R3H domain containing 1 -0.022042
SYT1 synaptotagmin I -0.022004
ENO1 enolase 1, (alpha) -0.021762
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -0.0216995
CNRIP1 cannabinoid receptor interacting protein 1 -0.0214196
ANKRD12 ankyrin repeat domain 12 -0.0213795
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0213417
HMGA1 high mobility group AT-hook 1 -0.0211441
ARID1A AT rich interactive domain 1A (SWI-like) -0.0211099
SREBF2 sterol regulatory element binding transcription factor 2 -0.020937
IARS1 isoleucyl-tRNA synthetase 1 -0.02092
SEPTIN7 septin 7 -0.0207284