Lucanthone_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GOLGB1 golgin B1 0.0702506
TBC1D22A TBC1 domain family, member 22A 0.0675291
VEGFA vascular endothelial growth factor A 0.0626747
BCLAF1 BCL2-associated transcription factor 1 0.052709
CCNL1 cyclin L1 0.0519802
ZMYND8 zinc finger, MYND-type containing 8 0.0502934
MAML2 mastermind-like 2 (Drosophila) 0.0466766
INTS6 integrator complex subunit 6 0.0431002
SRRM2 serine/arginine repetitive matrix 2 0.041761
DSPP dentin sialophosphoprotein 0.0412177
UBN2 ubinuclein 2 0.0409425
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0405003
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0390457
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0386779
TMED2 transmembrane emp24 domain trafficking protein 2 0.038221
SYNE2 spectrin repeat containing, nuclear envelope 2 0.037872
TMF1 TATA element modulatory factor 1 0.0374988
SQSTM1 sequestosome 1 0.0360934
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.035923
TSHZ2 teashirt zinc finger homeobox 2 0.0344326
BIRC3 baculoviral IAP repeat containing 3 0.0341904
B2M beta-2-microglobulin 0.03362
ERBB3 erb-b2 receptor tyrosine kinase 3 0.0334542
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0330622
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0329131
CDHR2 cadherin-related family member 2 0.0320891
FNDC3B fibronectin type III domain containing 3B 0.0320155
DST dystonin 0.0317401
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0312724
CTNND1 catenin (cadherin-associated protein), delta 1 0.0306532
ZNF609 zinc finger protein 609 0.0301722
GNPDA1 glucosamine-6-phosphate deaminase 1 0.030062
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0299774
SPAG9 sperm associated antigen 9 0.0289145
OGA O-GlcNAcase 0.0285862
SAMD4A sterile alpha motif domain containing 4A 0.0285497
BRD2 bromodomain containing 2 0.0283594
SEC31A SEC31 homolog A (S. cerevisiae) 0.0282182
COPG1 coatomer protein complex, subunit gamma 1 0.0279335
STYXL2 serine/threonine/tyrosine interacting like 2 0.0276364
TMC5 transmembrane channel-like 5 0.0274747
RPL21 ribosomal protein L21 0.0268279
MCL1 myeloid cell leukemia 1 0.0266261
IGFBP3 insulin-like growth factor binding protein 3 0.0263391
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0261955
CPNE4 copine IV 0.0260709
TPM3 tropomyosin 3 0.0259237
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.0258795
BSDC1 BSD domain containing 1 0.0258641
RPL7 ribosomal protein L7 0.0256857
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0242174
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.0242049
TAOK3 TAO kinase 3 0.0240225
DSCAM Down syndrome cell adhesion molecule 0.0236305
ZNF148 zinc finger protein 148 0.0235437
CHD3 chromodomain helicase DNA binding protein 3 0.0234976
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0234779
XDH xanthine dehydrogenase 0.023319
SFTPA2 surfactant protein A2 0.0227719
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0227155
LCORL ligand dependent nuclear receptor corepressor-like 0.0225875
MYH9 myosin, heavy chain 9, non-muscle 0.0223564
CFAP44 cilia and flagella associated protein 44 0.0222972
ZNF841 zinc finger protein 841 0.0220757
EIF4A2 eukaryotic translation initiation factor 4A2 0.0218272
SEC16A SEC16 homolog A (S. cerevisiae) 0.0217815
HYOU1 hypoxia up-regulated 1 0.0216141
PMM2 phosphomannomutase 2 0.0214602
CYSTM1 cysteine-rich transmembrane module containing 1 0.0213295
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0212769
PCBP2 poly(rC) binding protein 2 0.0208987
MAML3 mastermind-like 3 (Drosophila) 0.020815
PGM3 phosphoglucomutase 3 0.0208023
HDLBP high density lipoprotein binding protein 0.0204502
LDLRAD4 low density lipoprotein receptor class A domain containing 4 0.0203404
IRS2 insulin receptor substrate 2 0.0202603
FOSL2 FOS-like antigen 2 0.0202549
PRRC2C proline-rich coiled-coil 2C 0.0201627
SLK STE20-like kinase 0.0201398
ACIN1 apoptotic chromatin condensation inducer 1 0.0201117
SOD2 superoxide dismutase 2, mitochondrial 0.0199943
ACBD3 acyl-CoA binding domain containing 3 0.0199059
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 0.0199044
ALPK1 alpha-kinase 1 0.0198673
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0198113
ITGA6 integrin, alpha 6 0.0196512
BABAM2 BRISC and BRCA1 A complex member 2 0.0195794
LIMA1 LIM domain and actin binding 1 0.0195631
SAA2-SAA4 SAA2-SAA4 readthrough 0.0195293
RPS17 ribosomal protein S17 0.0195134
NBR1 neighbor of BRCA1 gene 1 0.0194547
MBTD1 mbt domain containing 1 0.0193814
ESYT2 extended synaptotagmin-like protein 2 0.0192383
HUNK hormonally up-regulated Neu-associated kinase 0.0191589
HELZ helicase with zinc finger 0.0190501
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 0.0189574
KIF16B kinesin family member 16B 0.0189132
FAM13A family with sequence similarity 13, member A 0.0188761
AFF1 AF4/FMR2 family, member 1 0.0188479
BICRAL BICRA like chromatin remodeling complex associated protein 0.018724

decreased expression

Symbol Name Standardized Value
LCN2 lipocalin 2 -0.116453
RUNX1 runt-related transcription factor 1 -0.115284
NDRG1 N-myc downstream regulated 1 -0.098734
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0948852
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0932141
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0882588
EXT1 exostosin glycosyltransferase 1 -0.0863283
ANXA2 annexin A2 -0.0819836
IFI6 interferon, alpha-inducible protein 6 -0.0768909
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0711971
TPT1 tumor protein, translationally-controlled 1 -0.0688163
RNF43 ring finger protein 43 -0.0682886
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.067608
VCL vinculin -0.0674895
PERP PERP, TP53 apoptosis effector -0.0673779
H1-0 H1.0 linker histone -0.0668416
RHOBTB3 Rho-related BTB domain containing 3 -0.0663189
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0630428
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0618827
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0618768
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0597159
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0578047
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0575599
ANKRD10 ankyrin repeat domain 10 -0.0558937
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0550557
NF1 neurofibromin 1 -0.0549808
PDIA3 protein disulfide isomerase family A, member 3 -0.0521861
SAMD12 sterile alpha motif domain containing 12 -0.0513992
ARHGAP5 Rho GTPase activating protein 5 -0.0510974
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0502479
STS steroid sulfatase (microsomal), isozyme S -0.0501143
XAF1 XIAP associated factor 1 -0.0496029
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0480458
STK24 serine/threonine kinase 24 -0.0467062
ATP11A ATPase, class VI, type 11A -0.0464299
DENND4C DENN/MADD domain containing 4C -0.0462903
TXNRD1 thioredoxin reductase 1 -0.0456885
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0447967
GCLC glutamate-cysteine ligase, catalytic subunit -0.0445428
PGK1 phosphoglycerate kinase 1 -0.0441279
EPCAM epithelial cell adhesion molecule -0.0438491
MX2 MX dynamin-like GTPase 2 -0.0409789
TNRC6B trinucleotide repeat containing 6B -0.0395495
ANXA4 annexin A4 -0.0395332
SERINC5 serine incorporator 5 -0.0394158
FOXP1 forkhead box P1 -0.0386547
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0379122
DLG1 discs, large homolog 1 (Drosophila) -0.0378806
TRIP12 thyroid hormone receptor interactor 12 -0.0374702
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0373291
ACTN4 actinin, alpha 4 -0.0372789
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0363125
CLYBL citrate lyase beta like -0.0361625
SPATS2L spermatogenesis associated, serine-rich 2-like -0.035902
TXNIP thioredoxin interacting protein -0.0349738
EPHB2 EPH receptor B2 -0.0345338
RPS24 ribosomal protein S24 -0.0342501
UBL3 ubiquitin-like 3 -0.034173
PLSCR1 phospholipid scramblase 1 -0.0341293
RRBP1 ribosome binding protein 1 -0.0339154
TJP1 tight junction protein 1 -0.0337213
ERBIN erbb2 interacting protein -0.0336886
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0335694
SPATA13 spermatogenesis associated 13 -0.0335636
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0335329
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0333425
EPSTI1 epithelial stromal interaction 1 (breast) -0.0333327
EHF ets homologous factor -0.0330204
APP amyloid beta (A4) precursor protein -0.0326313
FHL2 four and a half LIM domains 2 -0.03236
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0323568
KLF5 Kruppel-like factor 5 (intestinal) -0.0321835
LNX2 ligand of numb-protein X 2 -0.0321808
TMEM62 transmembrane protein 62 -0.0319511
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0312972
NCOA3 nuclear receptor coactivator 3 -0.0311651
KLF6 Kruppel-like factor 6 -0.0311558
HMGB1 high mobility group box 1 -0.0311436
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0311325
PTMA prothymosin, alpha -0.0309888
SPG11 spastic paraplegia 11 (autosomal recessive) -0.0307557
PATJ PATJ crumbs cell polarity complex component -0.0306294
ARHGAP26 Rho GTPase activating protein 26 -0.030618
RAD21 RAD21 homolog (S. pombe) -0.0304808
ITM2B integral membrane protein 2B -0.0300702
NUP214 nucleoporin 214kDa -0.0300181
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0299436
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.02984
MUC13 mucin 13, cell surface associated -0.0297434
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic -0.0296075
SLC38A1 solute carrier family 38, member 1 -0.0293714
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0293626
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.0293214
NCOA7 nuclear receptor coactivator 7 -0.0292529
HLA-B major histocompatibility complex, class I, B -0.0291259
GSE1 Gse1 coiled-coil protein -0.0290699
ZNFX1 zinc finger, NFX1-type containing 1 -0.0287656
ARL15 ADP-ribosylation factor-like 15 -0.0284981
AOPEP aminopeptidase O (putative) -0.0284629
ATP9A ATPase, class II, type 9A -0.0283257