Lucanthone_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.0553017
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0505864
TFPI2 tissue factor pathway inhibitor 2 0.0344592
RPL4 ribosomal protein L4 0.0314318
BIRC3 baculoviral IAP repeat containing 3 0.0310705
WDR43 WD repeat domain 43 0.0300626
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0286863
FGB fibrinogen beta chain 0.0278574
FAM168A family with sequence similarity 168, member A 0.0273504
RTN4 reticulon 4 0.0262765
YBX3 Y box binding protein 3 0.0248549
NAMPT nicotinamide phosphoribosyltransferase 0.0245127
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0222816
TFG TRK-fused gene 0.0221346
YBX1 Y box binding protein 1 0.0216615
MKI67 marker of proliferation Ki-67 0.0206677
FXR1 fragile X mental retardation, autosomal homolog 1 0.0206255
CCNL1 cyclin L1 0.0205803
RPS12 ribosomal protein S12 0.020208
PM20D1 peptidase M20 domain containing 1 0.019869
CXCL8 chemokine (C-X-C motif) ligand 8 0.0197184
HSPA8 heat shock 70kDa protein 8 0.0191357
DENND4A DENN/MADD domain containing 4A 0.0188487
PFDN2 prefoldin subunit 2 0.0187278
TM4SF1 transmembrane 4 L six family member 1 0.0182555
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0179015
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0178832
PNN pinin, desmosome associated protein 0.0177327
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0175185
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.017247
SDC4 syndecan 4 0.0170214
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0165942
TPM3 tropomyosin 3 0.016537
BIRC2 baculoviral IAP repeat containing 2 0.0165076
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0162283
RBM8A RNA binding motif protein 8A 0.0159642
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0157675
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0156665
THBS1 thrombospondin 1 0.0156496
CAMTA1 calmodulin binding transcription activator 1 0.0152337
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0152196
KLF6 Kruppel-like factor 6 0.0152163
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0151771
RPL26 ribosomal protein L26 0.0151527
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0150093
ADAM9 ADAM metallopeptidase domain 9 0.0149152
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0145577
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0145222
RRM2 ribonucleotide reductase M2 0.0141703
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0141461
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0141068
JAK1 Janus kinase 1 0.0140834
RPL3 ribosomal protein L3 0.0137252
AREG amphiregulin 0.0136823
CENPF centromere protein F, 350/400kDa 0.0135736
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0130671
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0130467
RPS7 ribosomal protein S7 0.0129279
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0127365
SIN3A SIN3 transcription regulator family member A 0.0126923
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0124885
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0124871
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0124548
HBS1L HBS1-like translational GTPase 0.0124502
UPP1 uridine phosphorylase 1 0.0124161
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0121629
NCAPD2 non-SMC condensin I complex, subunit D2 0.0121359
RPL23 ribosomal protein L23 0.0118862
ILF2 interleukin enhancer binding factor 2 0.0118862
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0117668
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0115741
RPL41 ribosomal protein L41 0.0115537
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0115267
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0114186
MTPN myotrophin 0.011386
ELOC elongin C 0.0113623
LAPTM4A lysosomal protein transmembrane 4 alpha 0.01136
ENY2 enhancer of yellow 2 homolog (Drosophila) 0.0113268
TMEM123 transmembrane protein 123 0.0112729
RAD21 RAD21 homolog (S. pombe) 0.0112665
FGG fibrinogen gamma chain 0.0112113
RPL5 ribosomal protein L5 0.0111652
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0110459
CCL2 chemokine (C-C motif) ligand 2 0.0110404
SET SET nuclear proto-oncogene 0.0107957
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0106587
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0105677
CSDE1 cold shock domain containing E1, RNA-binding 0.0105535
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0104529
WBP11 WW domain binding protein 11 0.0103977
NACA nascent polypeptide-associated complex alpha subunit 0.010394
RAB11A RAB11A, member RAS oncogene family 0.0103546
CXCL2 chemokine (C-X-C motif) ligand 2 0.0103252
RPS18 ribosomal protein S18 0.0103192
DUT deoxyuridine triphosphatase 0.0102529
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0101916
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0100681
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.0100612
NOCT nocturnin 0.00992981
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.00980641

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.189692
THSD4 thrombospondin, type I, domain containing 4 -0.164061
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.130375
MT2A metallothionein 2A -0.123422
DOCK4 dedicator of cytokinesis 4 -0.116417
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.102572
PDE4D phosphodiesterase 4D, cAMP-specific -0.0919304
VIM vimentin -0.0888484
FMNL2 formin-like 2 -0.0765843
FNDC3B fibronectin type III domain containing 3B -0.0714646
FTL ferritin, light polypeptide -0.071325
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0698707
CMIP c-Maf inducing protein -0.0679802
BASP1 brain abundant, membrane attached signal protein 1 -0.0678542
IGFBP3 insulin-like growth factor binding protein 3 -0.0668885
TRIO trio Rho guanine nucleotide exchange factor -0.0654054
FLNB filamin B, beta -0.0637232
PARD3 par-3 family cell polarity regulator -0.062184
SAMD4A sterile alpha motif domain containing 4A -0.0600572
PTPRM protein tyrosine phosphatase, receptor type, M -0.0593803
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.058404
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0581254
SVIL supervillin -0.0580712
ACTG1 actin gamma 1 -0.0549493
UBASH3B ubiquitin associated and SH3 domain containing B -0.0536967
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0521415
WAC WW domain containing adaptor with coiled-coil -0.0518655
ARHGAP26 Rho GTPase activating protein 26 -0.0503673
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0483842
MAML3 mastermind-like 3 (Drosophila) -0.0474238
PKM pyruvate kinase, muscle -0.0463534
BIRC6 baculoviral IAP repeat containing 6 -0.0452221
EXT1 exostosin glycosyltransferase 1 -0.0443633
COPA coatomer protein complex, subunit alpha -0.0442543
DOCK5 dedicator of cytokinesis 5 -0.043685
EFNA5 ephrin-A5 -0.0430045
ZBTB20 zinc finger and BTB domain containing 20 -0.0426382
ZFHX3 zinc finger homeobox 3 -0.042442
PUM2 pumilio RNA-binding family member 2 -0.0423328
UTRN utrophin -0.0422353
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0416558
ANKRD11 ankyrin repeat domain 11 -0.0400373
SMOC1 SPARC related modular calcium binding 1 -0.039693
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0393814
STRN3 striatin, calmodulin binding protein 3 -0.0393027
AKAP13 A kinase (PRKA) anchor protein 13 -0.0390812
IGF2 insulin-like growth factor 2 -0.038529
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0384164
ELL2 elongation factor, RNA polymerase II, 2 -0.0383295
DST dystonin -0.0376541
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0374813
ERBIN erbb2 interacting protein -0.0367093
CFDP1 craniofacial development protein 1 -0.0366924
NEBL nebulette -0.036327
ITCH itchy E3 ubiquitin protein ligase -0.0363184
PTK2 protein tyrosine kinase 2 -0.0362342
BICC1 BicC family RNA binding protein 1 -0.0361967
PYGL phosphorylase, glycogen, liver -0.0356771
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0356413
EGFR epidermal growth factor receptor -0.0355113
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0353557
ATXN1 ataxin 1 -0.0351752
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0349267
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0347125
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0346532
TMSB10 thymosin beta 10 -0.0346267
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0345984
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0339886
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0339717
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0339538
JMJD1C jumonji domain containing 1C -0.0338483
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0338312
GLG1 golgi glycoprotein 1 -0.0333607
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0332832
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0330448
NF1 neurofibromin 1 -0.032996
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0326031
FTH1 ferritin, heavy polypeptide 1 -0.0322392
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0321055
CUX1 cut-like homeobox 1 -0.0320892
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0317795
ACTN1 actinin, alpha 1 -0.0317622
KTN1 kinectin 1 (kinesin receptor) -0.0316976
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0314709
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.031001
NUMB numb homolog (Drosophila) -0.0308337
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0307248
SBF2 SET binding factor 2 -0.0307021
RAB7A RAB7A, member RAS oncogene family -0.0306851
BABAM2 BRISC and BRCA1 A complex member 2 -0.0306729
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0306133
KMT2C lysine (K)-specific methyltransferase 2C -0.0303378
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0302507
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0298497
SNX14 sorting nexin 14 -0.029847
NDRG1 N-myc downstream regulated 1 -0.0298383
NHSL1 NHS-like 1 -0.0296635
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0294455
CHD9 chromodomain helicase DNA binding protein 9 -0.028677
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0282433