Lucanthone_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.175343
TRIO trio Rho guanine nucleotide exchange factor 0.102725
GRAMD1B GRAM domain containing 1B 0.0791469
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0779003
TFPI2 tissue factor pathway inhibitor 2 0.061323
MARCHF4 membrane associated ring-CH-type finger 4 0.0546015
ZFAND3 zinc finger, AN1-type domain 3 0.0519604
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0493032
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0431842
CCNL1 cyclin L1 0.0417718
ELL2 elongation factor, RNA polymerase II, 2 0.0386912
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0379326
GATAD2B GATA zinc finger domain containing 2B 0.0366111
KLF7 Kruppel-like factor 7 (ubiquitous) 0.036387
SMAD3 SMAD family member 3 0.0356839
SFPQ splicing factor proline/glutamine-rich 0.03487
SND1 staphylococcal nuclease and tudor domain containing 1 0.0346303
MYH9 myosin, heavy chain 9, non-muscle 0.0342933
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0340082
ATP11A ATPase, class VI, type 11A 0.033929
EXOC6B exocyst complex component 6B 0.0319458
NABP1 nucleic acid binding protein 1 0.0309675
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0303762
RTN4 reticulon 4 0.0295145
PLCB4 phospholipase C, beta 4 0.0289862
PLEC plectin 0.0289261
THSD4 thrombospondin, type I, domain containing 4 0.0281519
WDR43 WD repeat domain 43 0.0280193
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0277298
GSK3B glycogen synthase kinase 3 beta 0.0276282
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0273654
RUSC2 RUN and SH3 domain containing 2 0.0270671
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0258346
RNF145 ring finger protein 145 0.0257611
BIRC6 baculoviral IAP repeat containing 6 0.0257573
PCBP2 poly(rC) binding protein 2 0.0257382
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0255637
ADAM9 ADAM metallopeptidase domain 9 0.0255156
EXT1 exostosin glycosyltransferase 1 0.0253679
ANXA5 annexin A5 0.0252882
TPM3 tropomyosin 3 0.0252651
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0245706
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0244466
BRD4 bromodomain containing 4 0.0243811
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0243371
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0243236
USP9X ubiquitin specific peptidase 9, X-linked 0.0242266
WNK1 WNK lysine deficient protein kinase 1 0.0240353
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0240181
KMT2C lysine (K)-specific methyltransferase 2C 0.0240063
OGA O-GlcNAcase 0.0236677
ACTN1 actinin, alpha 1 0.0235611
RUNX1 runt-related transcription factor 1 0.0231791
TSC22D2 TSC22 domain family, member 2 0.0228329
SIN3A SIN3 transcription regulator family member A 0.0225827
TBK1 TANK-binding kinase 1 0.0223724
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0222945
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0217782
DENND1A DENN/MADD domain containing 1A 0.0217778
ADAM17 ADAM metallopeptidase domain 17 0.0217179
MCL1 myeloid cell leukemia 1 0.0214541
SPRED2 sprouty-related, EVH1 domain containing 2 0.0214105
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0213555
RB1CC1 RB1-inducible coiled-coil 1 0.0213166
DCAF8 DDB1 and CUL4 associated factor 8 0.0212794
PUM2 pumilio RNA-binding family member 2 0.0206191
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0204328
LRP6 low density lipoprotein receptor-related protein 6 0.0204065
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0203703
DOCK5 dedicator of cytokinesis 5 0.0202903
DST dystonin 0.0200138
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0200039
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0199077
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0198118
SHB Src homology 2 domain containing adaptor protein B 0.0197717
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0196263
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0196129
ANKRD11 ankyrin repeat domain 11 0.0194751
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0192651
MACF1 microtubule-actin crosslinking factor 1 0.019127
BCAS3 breast carcinoma amplified sequence 3 0.0191099
TRIP12 thyroid hormone receptor interactor 12 0.0190267
BRD2 bromodomain containing 2 0.0188204
DIDO1 death inducer-obliterator 1 0.0186723
RLIM ring finger protein, LIM domain interacting 0.0184471
SMYD3 SET and MYND domain containing 3 0.0182762
NCAPG2 non-SMC condensin II complex, subunit G2 0.0182182
ZNF644 zinc finger protein 644 0.0181323
NCKAP1 NCK-associated protein 1 0.0181004
USP24 ubiquitin specific peptidase 24 0.0180691
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0178678
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.017846
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0178245
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0177994
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0177657
TSPAN9 tetraspanin 9 0.0176081
KDM2A lysine (K)-specific demethylase 2A 0.0175409
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0173817
MYPN myopalladin 0.0172577
C2CD5 C2 calcium-dependent domain containing 5 0.0171781

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.358138
PTMA prothymosin, alpha -0.109941
VIM vimentin -0.0897415
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0781053
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0709922
TMSB10 thymosin beta 10 -0.0681704
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0670721
PDE4D phosphodiesterase 4D, cAMP-specific -0.0623551
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0620623
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0511961
TPI1 triosephosphate isomerase 1 -0.0506672
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0503788
ACTG1 actin gamma 1 -0.0500509
YBX3 Y box binding protein 3 -0.0491263
TPT1 tumor protein, translationally-controlled 1 -0.0462968
GNAS GNAS complex locus -0.0453455
RAD51B RAD51 paralog B -0.0438727
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.041707
HMGA2 high mobility group AT-hook 2 -0.0382491
EML4 echinoderm microtubule associated protein like 4 -0.0381949
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0366641
AKAP12 A kinase (PRKA) anchor protein 12 -0.0344959
RPS8 ribosomal protein S8 -0.033777
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0329048
MT2A metallothionein 2A -0.0325478
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0324233
TUBA1B tubulin, alpha 1b -0.0324033
STC1 stanniocalcin 1 -0.0318581
WSB1 WD repeat and SOCS box containing 1 -0.0313672
NCOA7 nuclear receptor coactivator 7 -0.0312892
DEK DEK proto-oncogene -0.0309292
TPM4 tropomyosin 4 -0.0301324
S100A10 S100 calcium binding protein A10 -0.0300822
NAP1L1 nucleosome assembly protein 1-like 1 -0.0292492
IFI6 interferon, alpha-inducible protein 6 -0.0283331
RACK1 receptor for activated C kinase 1 -0.0282575
RPL37 ribosomal protein L37 -0.0270875
RPS3 ribosomal protein S3 -0.0267196
RPL12 ribosomal protein L12 -0.0262621
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.025669
PDIA3 protein disulfide isomerase family A, member 3 -0.0255568
TPM2 tropomyosin 2 (beta) -0.0248528
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0246958
ATP5F1B ATP synthase F1 subunit beta -0.0242149
LMAN1 lectin, mannose-binding, 1 -0.024027
FTL ferritin, light polypeptide -0.0239878
RPS25 ribosomal protein S25 -0.02394
RPL34 ribosomal protein L34 -0.0236091
CANX calnexin -0.0229971
UBB ubiquitin B -0.0226357
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0219594
RPLP0 ribosomal protein, large, P0 -0.021528
RPS21 ribosomal protein S21 -0.021406
RPLP1 ribosomal protein, large, P1 -0.0213757
DTNB dystrobrevin, beta -0.021215
STAU1 staufen double-stranded RNA binding protein 1 -0.0211949
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0208156
RPL37A ribosomal protein L37a -0.0207792
TAS2R14 taste receptor, type 2, member 14 -0.0207558
RPL8 ribosomal protein L8 -0.0207543
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0207427
MT1X metallothionein 1X -0.0206686
PRH1 proline-rich protein HaeIII subfamily 1 -0.0206068
SRP72 signal recognition particle 72kDa -0.0204269
MORF4L2 mortality factor 4 like 2 -0.0201989
ENOSF1 enolase superfamily member 1 -0.0200691
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.020043
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0199702
RPS29 ribosomal protein S29 -0.0198336
PYGL phosphorylase, glycogen, liver -0.0195777
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0193861
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0192519
PFN1 profilin 1 -0.0190404
VDAC1 voltage-dependent anion channel 1 -0.0188105
ENO1 enolase 1, (alpha) -0.0187407
CCND2 cyclin D2 -0.0185701
MRPS5 mitochondrial ribosomal protein S5 -0.0184425
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0180477
EGR1 early growth response 1 -0.0178802
SCAF11 SR-related CTD-associated factor 11 -0.0178129
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0177267
P4HB prolyl 4-hydroxylase, beta polypeptide -0.017702
KPNB1 karyopherin (importin) beta 1 -0.0175436
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0175305
TUBB tubulin, beta class I -0.0174262
RPL9 ribosomal protein L9 -0.0173649
KMT2A lysine (K)-specific methyltransferase 2A -0.0172721
UBC ubiquitin C -0.01718
RPL31 ribosomal protein L31 -0.017173
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0169968
RPS19 ribosomal protein S19 -0.0168859
RPS15 ribosomal protein S15 -0.0168644
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0168183
KTN1 kinectin 1 (kinesin receptor) -0.0168104
FSCN1 fascin actin-bundling protein 1 -0.016561
CALR calreticulin -0.0163863
CCT3 chaperonin containing TCP1, subunit 3 (gamma) -0.0162687
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0160437
RPL38 ribosomal protein L38 -0.0160293
HLA-B major histocompatibility complex, class I, B -0.0160064