Lucanthone_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB4X thymosin beta 4, X-linked 0.0529863
ITGAV integrin, alpha V 0.047896
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0419539
CKAP5 cytoskeleton associated protein 5 0.0419294
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0418684
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0382147
ASPH aspartate beta-hydroxylase 0.0382057
CCNL1 cyclin L1 0.0379174
KMT2E lysine (K)-specific methyltransferase 2E 0.0359279
ANXA1 annexin A1 0.0340302
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0335963
TSC22D2 TSC22 domain family, member 2 0.0312135
ANKRD11 ankyrin repeat domain 11 0.0304641
ARRDC3 arrestin domain containing 3 0.0293287
RAB6A RAB6A, member RAS oncogene family 0.0291579
SFTPA2 surfactant protein A2 0.0287687
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0285435
KDM5B lysine (K)-specific demethylase 5B 0.0281583
MCL1 myeloid cell leukemia 1 0.028028
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0279247
BRD2 bromodomain containing 2 0.0279221
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0278041
RPL21 ribosomal protein L21 0.0277483
PLPP1 phospholipid phosphatase 1 0.027176
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0271406
SNX6 sorting nexin 6 0.0265487
CCDC88A coiled-coil domain containing 88A 0.0265024
AKAP12 A kinase (PRKA) anchor protein 12 0.0264
DSCAM Down syndrome cell adhesion molecule 0.0260312
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0260126
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0255044
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0253756
CHD1 chromodomain helicase DNA binding protein 1 0.0253167
BRD4 bromodomain containing 4 0.0251447
RPL37 ribosomal protein L37 0.0247741
TENT4A terminal nucleotidyltransferase 4A 0.0246657
B2M beta-2-microglobulin 0.0246425
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 0.0241655
KIF11 kinesin family member 11 0.0240214
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0240142
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.0238883
GPBP1 GC-rich promoter binding protein 1 0.0238857
GOLIM4 golgi integral membrane protein 4 0.0238584
RLIM ring finger protein, LIM domain interacting 0.0238159
TENM3 teneurin transmembrane protein 3 0.0238113
RNF13 ring finger protein 13 0.0237597
APLP2 amyloid beta (A4) precursor-like protein 2 0.0236899
FTL ferritin, light polypeptide 0.0236386
FNDC3B fibronectin type III domain containing 3B 0.0234915
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.023466
HP1BP3 heterochromatin protein 1, binding protein 3 0.0232926
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0231504
ITSN2 intersectin 2 0.0230964
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0229923
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0228491
THOC2 THO complex 2 0.022466
TMF1 TATA element modulatory factor 1 0.0223435
PARN poly(A)-specific ribonuclease 0.0222374
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0221518
EEF1G eukaryotic translation elongation factor 1 gamma 0.0219558
CENPF centromere protein F, 350/400kDa 0.021939
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.0219359
YME1L1 YME1-like 1 ATPase 0.0219189
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0216867
MICU2 mitochondrial calcium uptake 2 0.021682
UTRN utrophin 0.0216426
LRRC4C leucine rich repeat containing 4C 0.0216103
ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 0.0215875
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0215617
HDGF hepatoma-derived growth factor 0.0213779
ADAM10 ADAM metallopeptidase domain 10 0.0213601
ZNF608 zinc finger protein 608 0.0210599
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0209991
KCTD3 potassium channel tetramerization domain containing 3 0.0209497
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0208762
TCF20 transcription factor 20 (AR1) 0.0208218
LPIN1 lipin 1 0.0203886
MYH10 myosin, heavy chain 10, non-muscle 0.0201421
CSNK1A1 casein kinase 1, alpha 1 0.0200349
TP53BP1 tumor protein p53 binding protein 1 0.0199916
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2 0.0199845
CABIN1 calcineurin binding protein 1 0.0199659
FBXO42 F-box protein 42 0.019941
ECT2 epithelial cell transforming 2 0.0198081
SOX2 SRY (sex determining region Y)-box 2 0.0198067
CNN3 calponin 3, acidic 0.0197098
ZRANB2 zinc finger, RAN-binding domain containing 2 0.0195797
CLCC1 chloride channel CLIC-like 1 0.0194641
SBNO1 strawberry notch homolog 1 (Drosophila) 0.019363
SRRM2 serine/arginine repetitive matrix 2 0.0192731
KDM6A lysine (K)-specific demethylase 6A 0.0191615
N4BP2L2 NEDD4 binding protein 2-like 2 0.0191598
TGFB2 transforming growth factor, beta 2 0.0191541
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) 0.0190543
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0189913
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0189744
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0189551
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0189189
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.018879
ZNF618 zinc finger protein 618 0.018862

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.125746
PCLO piccolo presynaptic cytomatrix protein -0.113737
ACTG1 actin gamma 1 -0.106434
THBS1 thrombospondin 1 -0.0917781
CADM2 cell adhesion molecule 2 -0.0848779
COL11A1 collagen, type XI, alpha 1 -0.0813601
GPC3 glypican 3 -0.0801345
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0795562
EMP1 epithelial membrane protein 1 -0.0729332
PEG10 paternally expressed 10 -0.0696802
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0677414
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.067102
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0651866
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0629898
NPAS3 neuronal PAS domain protein 3 -0.0628297
COL3A1 collagen, type III, alpha 1 -0.0623908
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0616921
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0579146
ACTN4 actinin, alpha 4 -0.0565176
CDK6 cyclin-dependent kinase 6 -0.0561587
CSMD3 CUB and Sushi multiple domains 3 -0.055903
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0543465
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0533715
ANXA2 annexin A2 -0.0527288
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0521214
SLC38A2 solute carrier family 38, member 2 -0.0517013
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0514346
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0514156
NTM neurotrimin -0.0511957
TPR translocated promoter region, nuclear basket protein -0.0510382
ATP5F1B ATP synthase F1 subunit beta -0.0508703
JMJD1C jumonji domain containing 1C -0.0499628
HDAC9 histone deacetylase 9 -0.049135
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0462461
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0456326
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0452438
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0450287
SLIT2 slit homolog 2 (Drosophila) -0.0449361
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0446599
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0437758
DST dystonin -0.0431435
ZFAND3 zinc finger, AN1-type domain 3 -0.0428041
SRP72 signal recognition particle 72kDa -0.0426443
NAP1L1 nucleosome assembly protein 1-like 1 -0.042003
HMGB2 high mobility group box 2 -0.0418464
RPL5 ribosomal protein L5 -0.0416708
DEK DEK proto-oncogene -0.040402
GARS1 glycyl-tRNA synthetase 1 -0.0401733
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0399742
RPS16 ribosomal protein S16 -0.0397203
COL1A2 collagen, type I, alpha 2 -0.0392336
SEPTIN7 septin 7 -0.0377829
ANK2 ankyrin 2, neuronal -0.0371137
SYT1 synaptotagmin I -0.0364729
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0363823
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0351873
HMCN1 hemicentin 1 -0.0342312
AHNAK AHNAK nucleoprotein -0.0342105
IARS1 isoleucyl-tRNA synthetase 1 -0.033858
PCDH7 protocadherin 7 -0.0338171
ADGRG6 adhesion G protein-coupled receptor G6 -0.0336124
RHEB Ras homolog enriched in brain -0.0332263
FBL fibrillarin -0.0329442
PDE4D phosphodiesterase 4D, cAMP-specific -0.0327094
RPL12 ribosomal protein L12 -0.032511
FOXP2 forkhead box P2 -0.0324452
MYO6 myosin VI -0.0324246
ZFR zinc finger RNA binding protein -0.0322387
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0321035
SPAG9 sperm associated antigen 9 -0.0320902
FER fer (fps/fes related) tyrosine kinase -0.031842
NIPBL Nipped-B homolog (Drosophila) -0.0316871
RPL19 ribosomal protein L19 -0.0312917
USP53 ubiquitin specific peptidase 53 -0.0310175
ZNF451 zinc finger protein 451 -0.0310017
ANXA5 annexin A5 -0.0303018
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0300212
NUP155 nucleoporin 155kDa -0.0297037
SCAF11 SR-related CTD-associated factor 11 -0.0294837
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0294223
UBE2K ubiquitin-conjugating enzyme E2K -0.0290624
ILF3 interleukin enhancer binding factor 3, 90kDa -0.0290541
TEX11 testis expressed 11 -0.0290452
BTG3 BTG family, member 3 -0.0290016
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0289949
INTS13 integrator complex subunit 13 -0.0287815
ZEB2 zinc finger E-box binding homeobox 2 -0.0286811
LIN28B lin-28 homolog B (C. elegans) -0.0285421
ADAM9 ADAM metallopeptidase domain 9 -0.0284945
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0284236
NF1 neurofibromin 1 -0.0283879
IPO7 importin 7 -0.0282431
HNRNPL heterogeneous nuclear ribonucleoprotein L -0.0282157
TWSG1 twisted gastrulation BMP signaling modulator 1 -0.0278084
TPM3 tropomyosin 3 -0.0277352
BTBD3 BTB (POZ) domain containing 3 -0.0277299
DACH1 dachshund family transcription factor 1 -0.0276365
CDC50A cell division cycle 50 P4-ATPase accessory subunit A -0.027577
STRN3 striatin, calmodulin binding protein 3 -0.027264
EVI5 ecotropic viral integration site 5 -0.0270824