Lucanthone_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB4X thymosin beta 4, X-linked 0.169564
CCNL1 cyclin L1 0.0873291
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0841947
ZNF292 zinc finger protein 292 0.082966
RBM39 RNA binding motif protein 39 0.0748953
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0720086
ZFAND3 zinc finger, AN1-type domain 3 0.0717806
FLNB filamin B, beta 0.0686474
GOLGA4 golgin A4 0.0673586
CAMTA1 calmodulin binding transcription activator 1 0.065736
DSCAM Down syndrome cell adhesion molecule 0.0626753
EZR ezrin 0.062599
EIF4A2 eukaryotic translation initiation factor 4A2 0.0619607
QKI QKI, KH domain containing, RNA binding 0.0586862
RTN4 reticulon 4 0.0583325
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0554941
NAMPT nicotinamide phosphoribosyltransferase 0.0535625
TXNRD1 thioredoxin reductase 1 0.0527988
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0518946
NUP58 nucleoporin 58 0.0505356
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0502358
ECT2 epithelial cell transforming 2 0.048149
KDM6A lysine (K)-specific demethylase 6A 0.0480404
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0475092
PRRC2C proline-rich coiled-coil 2C 0.0474233
ZEB1 zinc finger E-box binding homeobox 1 0.046769
LDHA lactate dehydrogenase A 0.0452934
B2M beta-2-microglobulin 0.0448926
PDE4D phosphodiesterase 4D, cAMP-specific 0.044581
AHNAK AHNAK nucleoprotein 0.0435546
CHD1 chromodomain helicase DNA binding protein 1 0.0432607
HDLBP high density lipoprotein binding protein 0.0431633
ELOVL5 ELOVL fatty acid elongase 5 0.0420421
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0414088
SETD5 SET domain containing 5 0.0413048
TMEM41B transmembrane protein 41B 0.0412099
PICALM phosphatidylinositol binding clathrin assembly protein 0.0402936
EIF4B eukaryotic translation initiation factor 4B 0.0396757
SRRM2 serine/arginine repetitive matrix 2 0.0390784
PTBP2 polypyrimidine tract binding protein 2 0.0389193
LPP LIM domain containing preferred translocation partner in lipoma 0.0388755
NCEH1 neutral cholesterol ester hydrolase 1 0.0381997
PRELID2 PRELI domain containing 2 0.03791
JMJD1C jumonji domain containing 1C 0.0377628
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0377137
TFG TRK-fused gene 0.0376783
RPL4 ribosomal protein L4 0.0376107
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0375015
PNISR PNN-interacting serine/arginine-rich protein 0.037093
KDM3A lysine (K)-specific demethylase 3A 0.0369875
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0366766
GSK3B glycogen synthase kinase 3 beta 0.0363668
RNF145 ring finger protein 145 0.0358922
DSTN destrin (actin depolymerizing factor) 0.0355706
ZBTB20 zinc finger and BTB domain containing 20 0.035156
PYGB phosphorylase, glycogen; brain 0.0351049
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.034447
CDC73 cell division cycle 73 0.0344403
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0342779
EEF2 eukaryotic translation elongation factor 2 0.0337498
RBM25 RNA binding motif protein 25 0.0333376
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0333166
NBAS neuroblastoma amplified sequence 0.0332396
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.033116
SAMD4A sterile alpha motif domain containing 4A 0.0329578
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0329193
PTK2 protein tyrosine kinase 2 0.0320084
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0320075
KMT2E lysine (K)-specific methyltransferase 2E 0.0319991
PRPF38B pre-mRNA processing factor 38B 0.0317262
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0314102
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0312119
BIRC2 baculoviral IAP repeat containing 2 0.0310637
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0310086
ADAM9 ADAM metallopeptidase domain 9 0.0309008
RAD23B RAD23 homolog B (S. cerevisiae) 0.0305235
RHEB Ras homolog enriched in brain 0.0304164
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0302082
MATR3 matrin 3 0.0301631
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0301542
RB1CC1 RB1-inducible coiled-coil 1 0.0301282
SLMAP sarcolemma associated protein 0.0296802
METTL15 methyltransferase like 15 0.0296058
ADAM10 ADAM metallopeptidase domain 10 0.029395
COG5 component of oligomeric golgi complex 5 0.0293254
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0292728
PUM2 pumilio RNA-binding family member 2 0.0291197
SPAG9 sperm associated antigen 9 0.0288075
DENND4A DENN/MADD domain containing 4A 0.0285829
CNOT4 CCR4-NOT transcription complex, subunit 4 0.028582
EEF1G eukaryotic translation elongation factor 1 gamma 0.0284338
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0283901
TBC1D22A TBC1 domain family, member 22A 0.028346
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.028179
RYBP RING1 and YY1 binding protein 0.0281501
MON2 MON2 homolog (S. cerevisiae) 0.0280381
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0279554
RLF rearranged L-myc fusion 0.0277956
GARS1 glycyl-tRNA synthetase 1 0.0277767
EWSR1 EWS RNA-binding protein 1 0.027502

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.151888
BMP10 bone morphogenetic protein 10 -0.129473
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.112611
FOXP1 forkhead box P1 -0.0983588
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0930101
PDE4B phosphodiesterase 4B, cAMP-specific -0.0815592
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0811965
PTMA prothymosin, alpha -0.0633746
DLG1 discs, large homolog 1 (Drosophila) -0.0621604
MKI67 marker of proliferation Ki-67 -0.0571347
NAV2 neuron navigator 2 -0.0525826
MYO5C myosin VC -0.0515635
HSPB1 heat shock 27kDa protein 1 -0.0472329
RPS6 ribosomal protein S6 -0.0455048
TPT1 tumor protein, translationally-controlled 1 -0.0437581
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0416275
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0367581
SMC4 structural maintenance of chromosomes 4 -0.0366563
WSB1 WD repeat and SOCS box containing 1 -0.0364063
NPAS2 neuronal PAS domain protein 2 -0.0359672
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0358361
SSBP2 single-stranded DNA binding protein 2 -0.0353007
CCND1 cyclin D1 -0.0346445
RPS8 ribosomal protein S8 -0.0345992
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0345732
S100A4 S100 calcium binding protein A4 -0.0338453
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0337081
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0330979
TUBB4B tubulin, beta 4B class IVb -0.03219
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0316753
LOC102724023 ES1 protein homolog, mitochondrial -0.0308688
ZMYND8 zinc finger, MYND-type containing 8 -0.0307051
SCLT1 sodium channel and clathrin linker 1 -0.030671
RPL35A ribosomal protein L35a -0.0305609
KPNB1 karyopherin (importin) beta 1 -0.0303011
CAMKMT calmodulin-lysine N-methyltransferase -0.0293422
CRPPA CDP-L-ribitol pyrophosphorylase A -0.0288953
MT2A metallothionein 2A -0.0286961
SDK1 sidekick cell adhesion molecule 1 -0.0280225
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.027973
ZNF438 zinc finger protein 438 -0.0279726
TJP1 tight junction protein 1 -0.0264549
CUX1 cut-like homeobox 1 -0.0263491
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0262966
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0258999
RPL34 ribosomal protein L34 -0.0257239
GSE1 Gse1 coiled-coil protein -0.0256906
ARL4C ADP-ribosylation factor-like 4C -0.0251485
RPS19 ribosomal protein S19 -0.0249069
BMP2K BMP2 inducible kinase -0.0246771
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0239052
BPTF bromodomain PHD finger transcription factor -0.0238313
FTL ferritin, light polypeptide -0.0236131
ONECUT2 one cut homeobox 2 -0.0235364
RPLP2 ribosomal protein, large, P2 -0.0235188
PDE7B phosphodiesterase 7B -0.0234849
HDAC9 histone deacetylase 9 -0.0232237
GLI3 GLI family zinc finger 3 -0.0230666
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0229121
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0228591
DIAPH3 diaphanous-related formin 3 -0.0225867
TUBA1B tubulin, alpha 1b -0.0222667
FHIT fragile histidine triad -0.0222037
TPX2 TPX2, microtubule-associated -0.0220371
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0218876
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0218676
RPL37A ribosomal protein L37a -0.0217856
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0216544
ACTG1 actin gamma 1 -0.0215978
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0215943
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0212523
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0208381
RPS13 ribosomal protein S13 -0.0207028
THBD thrombomodulin -0.0205333
PRH1 proline-rich protein HaeIII subfamily 1 -0.0205264
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0204117
TASOR2 transcription activation suppressor family member 2 -0.0202269
RPLP0 ribosomal protein, large, P0 -0.0200186
SPRY4 sprouty homolog 4 (Drosophila) -0.0198185
PRUNE2 prune homolog 2 (Drosophila) -0.0198161
RPS3 ribosomal protein S3 -0.0194375
STAT1 signal transducer and activator of transcription 1, 91kDa -0.019403
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0193014
EMP3 epithelial membrane protein 3 -0.0192951
RPLP1 ribosomal protein, large, P1 -0.0190251
RIGI RNA sensor RIG-I -0.0189903
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0189533
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0187424
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0187317
FBLN2 fibulin 2 -0.0187213
RAB27B RAB27B, member RAS oncogene family -0.0185665
RPL19 ribosomal protein L19 -0.0183126
RPS23 ribosomal protein S23 -0.0180143
IRS1 insulin receptor substrate 1 -0.0177894
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0177844
IFITM3 interferon induced transmembrane protein 3 -0.0176951
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0176
GLI2 GLI family zinc finger 2 -0.0172986
PKP4 plakophilin 4 -0.0172032
CENPP centromere protein P -0.01717