Lucanthone_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lucanthone perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lucanthone_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.0938689
B2M beta-2-microglobulin 0.083461
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0828684
VEGFA vascular endothelial growth factor A 0.07784
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0704698
CALR calreticulin 0.0587297
HOOK2 hook microtubule-tethering protein 2 0.0558795
COL6A3 collagen, type VI, alpha 3 0.0555969
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0526571
LIMS1 LIM and senescent cell antigen-like domains 1 0.0473475
TMSB4X thymosin beta 4, X-linked 0.0472872
LPP LIM domain containing preferred translocation partner in lipoma 0.0462983
PGK1 phosphoglycerate kinase 1 0.0449267
GARS1 glycyl-tRNA synthetase 1 0.0440918
COG5 component of oligomeric golgi complex 5 0.0426851
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0422493
JAK1 Janus kinase 1 0.0420873
TTC3 tetratricopeptide repeat domain 3 0.041939
PAPOLA poly(A) polymerase alpha 0.0415305
CDH13 cadherin 13 0.0415178
ATP13A3 ATPase type 13A3 0.0411877
UBA6 ubiquitin-like modifier activating enzyme 6 0.0399037
SBF2 SET binding factor 2 0.0389059
TPM3 tropomyosin 3 0.037973
TENT2 terminal nucleotidyltransferase 2 0.03662
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0364326
OPTN optineurin 0.0361471
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0355827
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0351012
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0349484
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0344223
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0343122
PLEC plectin 0.0340172
GOLGA4 golgin A4 0.0336551
SETD5 SET domain containing 5 0.0334141
FXR1 fragile X mental retardation, autosomal homolog 1 0.0333621
YBX1 Y box binding protein 1 0.0332031
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0316638
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.0315034
VCAN versican 0.030964
NAV1 neuron navigator 1 0.0307361
BIRC6 baculoviral IAP repeat containing 6 0.0298629
STK17B serine/threonine kinase 17b 0.0295864
UBQLN1 ubiquilin 1 0.0291142
RNF145 ring finger protein 145 0.0290093
FER fer (fps/fes related) tyrosine kinase 0.0289092
RPS12 ribosomal protein S12 0.0287016
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0286488
FOXJ3 forkhead box J3 0.0285854
EEF1G eukaryotic translation elongation factor 1 gamma 0.0285116
XPO1 exportin 1 0.028435
U2SURP U2 snRNP-associated SURP domain containing 0.0282409
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0280831
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0280211
CSNK1A1 casein kinase 1, alpha 1 0.027942
DIDO1 death inducer-obliterator 1 0.0278167
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0274545
COG6 component of oligomeric golgi complex 6 0.027391
MORF4L1 mortality factor 4 like 1 0.027274
WNK1 WNK lysine deficient protein kinase 1 0.0270599
CCNL1 cyclin L1 0.0269766
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0267795
SH3GL1 SH3-domain GRB2-like 1 0.0265445
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0261604
MORF4L2 mortality factor 4 like 2 0.0260607
NRIP1 nuclear receptor interacting protein 1 0.0260135
COPA coatomer protein complex, subunit alpha 0.026006
HYOU1 hypoxia up-regulated 1 0.0259456
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.0258861
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.0257379
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0256015
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.0255748
TRIP12 thyroid hormone receptor interactor 12 0.0255505
TMEM167A transmembrane protein 167A 0.0254966
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0254742
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.0254509
LAMB1 laminin, beta 1 0.0251975
FAM13B family with sequence similarity 13, member B 0.0251329
NOP58 NOP58 ribonucleoprotein 0.0251235
ICE1 interactor of little elongation complex ELL subunit 1 0.0250793
TPM1 tropomyosin 1 (alpha) 0.0249983
OSBPL2 oxysterol binding protein-like 2 0.024978
ADAR adenosine deaminase, RNA-specific 0.0249016
SETX senataxin 0.0248879
SCFD2 sec1 family domain containing 2 0.0247118
KIAA0319L KIAA0319-like 0.0246352
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 0.0245522
EMP1 epithelial membrane protein 1 0.0245356
RPTOR regulatory associated protein of MTOR, complex 1 0.024531
C5ORF15 chromosome 5 open reading frame 15 0.024495
YIPF5 Yip1 domain family, member 5 0.0243925
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0242869
NGLY1 N-glycanase 1 0.0241832
RSRC2 arginine/serine-rich coiled-coil 2 0.0236319
ECPAS Ecm29 proteasome adaptor and scaffold 0.0236109
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.023451
BCLAF1 BCL2-associated transcription factor 1 0.0233877
CYLD cylindromatosis (turban tumor syndrome) 0.0233582
HYCC2 hyccin PI4KA lipid kinase complex subunit 2 0.0233291
ZNF146 zinc finger protein 146 0.0232174

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.361947
TMSB10 thymosin beta 10 -0.115865
MT2A metallothionein 2A -0.114495
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.101305
UBC ubiquitin C -0.094432
LOX lysyl oxidase -0.0915763
FN1 fibronectin 1 -0.0769922
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0667805
SDC4 syndecan 4 -0.0612127
SRPK2 SRSF protein kinase 2 -0.0596625
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0595461
MEF2A myocyte enhancer factor 2A -0.0592985
TGFBI transforming growth factor, beta-induced, 68kDa -0.0580787
CCNI cyclin I -0.0556792
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0540664
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0517328
IL6 interleukin 6 -0.0503478
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0499342
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0498581
ANXA5 annexin A5 -0.0472602
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0471068
TXNIP thioredoxin interacting protein -0.0467475
COL1A1 collagen, type I, alpha 1 -0.0454868
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0450438
ZNF395 zinc finger protein 395 -0.0435978
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0433267
ENO1 enolase 1, (alpha) -0.043318
STC1 stanniocalcin 1 -0.0432143
NDRG1 N-myc downstream regulated 1 -0.0418359
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0409747
GRB10 growth factor receptor-bound protein 10 -0.0405846
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0400793
SEC31A SEC31 homolog A (S. cerevisiae) -0.0400113
WSB1 WD repeat and SOCS box containing 1 -0.0394915
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0394703
HIP1 huntingtin interacting protein 1 -0.0394679
SPAG9 sperm associated antigen 9 -0.0393678
SEPTIN7 septin 7 -0.0390483
FNDC3A fibronectin type III domain containing 3A -0.0388937
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0372907
PXMP2 peroxisomal membrane protein 2, 22kDa -0.0371165
FLNA filamin A, alpha -0.0364838
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.035832
MBD5 methyl-CpG binding domain protein 5 -0.0356507
VCL vinculin -0.035509
AHR aryl hydrocarbon receptor -0.0349622
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0348302
VIM vimentin -0.0347732
PRSS23 protease, serine, 23 -0.034169
GLIS3 GLIS family zinc finger 3 -0.0341302
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0336569
SOS2 son of sevenless homolog 2 (Drosophila) -0.0336177
OSMR oncostatin M receptor -0.0331522
PCM1 pericentriolar material 1 -0.0321987
TRPS1 trichorhinophalangeal syndrome I -0.0320098
PRELID2 PRELI domain containing 2 -0.03199
EXOC4 exocyst complex component 4 -0.0319714
RAB7A RAB7A, member RAS oncogene family -0.0318319
NRP1 neuropilin 1 -0.0317682
CLTC clathrin, heavy chain (Hc) -0.0317245
PALLD palladin, cytoskeletal associated protein -0.0314738
CDK6 cyclin-dependent kinase 6 -0.0314069
CCDC88A coiled-coil domain containing 88A -0.0312282
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0308248
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.030614
MACF1 microtubule-actin crosslinking factor 1 -0.0304008
WAC WW domain containing adaptor with coiled-coil -0.0303692
CAV1 caveolin 1, caveolae protein, 22kDa -0.0302213
ZNF207 zinc finger protein 207 -0.0301416
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0301394
DNAH11 dynein, axonemal, heavy chain 11 -0.0301053
WWTR1 WW domain containing transcription regulator 1 -0.0300257
AHNAK AHNAK nucleoprotein -0.0299028
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0294994
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0293847
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0292543
OGA O-GlcNAcase -0.0289843
MT1X metallothionein 1X -0.0286736
EFNA5 ephrin-A5 -0.0285524
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0285413
KMT2E lysine (K)-specific methyltransferase 2E -0.0284856
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 -0.028278
IGFBP3 insulin-like growth factor binding protein 3 -0.0281285
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0280945
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0279758
PTPN1 protein tyrosine phosphatase, non-receptor type 1 -0.0279551
EEF2 eukaryotic translation elongation factor 2 -0.0277232
FAF1 Fas (TNFRSF6) associated factor 1 -0.0277069
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) -0.0275128
SETBP1 SET binding protein 1 -0.0273237
THOC2 THO complex 2 -0.027316
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0270502
RPS6 ribosomal protein S6 -0.0269925
IL6ST interleukin 6 signal transducer -0.0266305
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0265203
FBN1 fibrillin 1 -0.0264591
VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) -0.0264407
RTN4 reticulon 4 -0.0263014
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0261698
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0260363