Lumateperone (tosylate)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Lumateperone (tosylate) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Lumateperone (tosylate)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.0800023
ICAM1 intercellular adhesion molecule 1 0.073237
FNDC3B fibronectin type III domain containing 3B 0.0523712
IGFBP3 insulin-like growth factor binding protein 3 0.0411015
WWTR1 WW domain containing transcription regulator 1 0.0386301
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0377991
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0364648
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0353179
DST dystonin 0.0342218
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 0.0327169
CD59 CD59 molecule, complement regulatory protein 0.0309113
ANGPTL4 angiopoietin-like 4 0.0291324
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0273427
SMAD3 SMAD family member 3 0.0272826
LPP LIM domain containing preferred translocation partner in lipoma 0.0268187
PRELID2 PRELI domain containing 2 0.0265973
INPP5F inositol polyphosphate-5-phosphatase F 0.0260698
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0255271
OSBPL10 oxysterol binding protein-like 10 0.0238588
ZBTB38 zinc finger and BTB domain containing 38 0.0234224
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0233594
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0227124
FGGY FGGY carbohydrate kinase domain containing 0.0221929
PTK2 protein tyrosine kinase 2 0.0216784
EHBP1 EH domain binding protein 1 0.0208114
SHC4 SHC (Src homology 2 domain containing) family, member 4 0.020686
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0205528
EYA1 EYA transcriptional coactivator and phosphatase 1 0.020233
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0201286
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0192679
SERINC1 serine incorporator 1 0.0190003
AMOTL1 angiomotin like 1 0.018496
NRG3 neuregulin 3 0.018478
CDK6 cyclin-dependent kinase 6 0.0181578
ANXA2 annexin A2 0.0178283
NAMPT nicotinamide phosphoribosyltransferase 0.0177847
MELTF melanotransferrin 0.0177809
CENPF centromere protein F, 350/400kDa 0.0175421
AFDN afadin, adherens junction formation factor 0.0170661
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0169419
ASPH aspartate beta-hydroxylase 0.016707
MAML3 mastermind-like 3 (Drosophila) 0.0161578
SH3KBP1 SH3-domain kinase binding protein 1 0.0159078
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0157704
OSBPL3 oxysterol binding protein-like 3 0.0157323
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0156941
STC1 stanniocalcin 1 0.0153979
RUNX1 runt-related transcription factor 1 0.0152029
USP9X ubiquitin specific peptidase 9, X-linked 0.0151605
ANKRD28 ankyrin repeat domain 28 0.0149273
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0148311
UBASH3B ubiquitin associated and SH3 domain containing B 0.0147976
QKI QKI, KH domain containing, RNA binding 0.0146487
PRKCSH protein kinase C substrate 80K-H 0.0142384
TNNC1 troponin C type 1 (slow) 0.0141693
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0141294
IL1RAP interleukin 1 receptor accessory protein 0.014028
OPHN1 oligophrenin 1 0.0137816
AKAP13 A kinase (PRKA) anchor protein 13 0.0137188
ZNF608 zinc finger protein 608 0.0137173
ZEB2 zinc finger E-box binding homeobox 2 0.0135196
BHLHE40 basic helix-loop-helix family, member e40 0.0135193
FBXL17 F-box and leucine-rich repeat protein 17 0.0134329
SAMD9 sterile alpha motif domain containing 9 0.0133953
TASOR transcription activation suppressor 0.0132744
AP1S3 adaptor-related protein complex 1, sigma 3 subunit 0.0130597
ANO6 anoctamin 6 0.0130349
CNKSR3 CNKSR family member 3 0.0130292
MT1X metallothionein 1X 0.0128976
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0128746
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.0128308
EZR ezrin 0.0126076
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0125436
RNF145 ring finger protein 145 0.0125344
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0125198
NFE2L1 nuclear factor, erythroid 2-like 1 0.0124601
FAM78B family with sequence similarity 78, member B 0.0123837
SFTPA2 surfactant protein A2 0.0122925
ARHGAP21 Rho GTPase activating protein 21 0.0122833
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0122818
TUG1 taurine up-regulated 1 (non-protein coding) 0.0120845
PARP9 poly (ADP-ribose) polymerase family, member 9 0.0120508
NPC1 Niemann-Pick disease, type C1 0.0120201
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0119246
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.0118814
MT2A metallothionein 2A 0.0117389
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0115938
RRM2 ribonucleotide reductase M2 0.0115181
SETBP1 SET binding protein 1 0.0113634
LEF1 lymphoid enhancer-binding factor 1 0.0113132
NBPF8 neuroblastoma breakpoint family, member 8 0.0112951
CSNK1G3 casein kinase 1, gamma 3 0.0111972
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0111904
TENM1 teneurin transmembrane protein 1 0.011124
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0110653
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0110033
ERRFI1 ERBB receptor feedback inhibitor 1 0.0109402
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0106731
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0106386
AP1S2 adaptor-related protein complex 1, sigma 2 subunit 0.0106208

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.225597
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.155244
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.130318
LSAMP limbic system-associated membrane protein -0.116164
UBC ubiquitin C -0.111607
NLGN1 neuroligin 1 -0.110471
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0843265
GOLGA4 golgin A4 -0.0706818
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0689497
EEF2 eukaryotic translation elongation factor 2 -0.0688425
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0684749
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0599882
RPS27A ribosomal protein S27a -0.0551763
PTMA prothymosin, alpha -0.0546445
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0545898
RPS3 ribosomal protein S3 -0.0515353
SQSTM1 sequestosome 1 -0.0496523
RAB7A RAB7A, member RAS oncogene family -0.0491429
PCBP2 poly(rC) binding protein 2 -0.0484168
CCND1 cyclin D1 -0.0471574
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0467174
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0447105
RPS6 ribosomal protein S6 -0.0442307
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0440417
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0410767
RPS8 ribosomal protein S8 -0.0404234
PDIA3 protein disulfide isomerase family A, member 3 -0.0395423
SLC39A11 solute carrier family 39, member 11 -0.0395195
CALU calumenin -0.0376327
SREBF2 sterol regulatory element binding transcription factor 2 -0.0375849
TMSB10 thymosin beta 10 -0.0373196
RTN4 reticulon 4 -0.0364899
BCAS3 breast carcinoma amplified sequence 3 -0.0362914
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0360929
RPL23 ribosomal protein L23 -0.0359825
P4HB prolyl 4-hydroxylase, beta polypeptide -0.035313
RHOA ras homolog family member A -0.0349292
PKM pyruvate kinase, muscle -0.0348063
EP300 E1A binding protein p300 -0.0346424
FLNA filamin A, alpha -0.0344167
RPS13 ribosomal protein S13 -0.0342154
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0341972
PRAME preferentially expressed antigen in melanoma -0.0309187
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0301793
FTL ferritin, light polypeptide -0.0291941
HLA-B major histocompatibility complex, class I, B -0.0289226
GPHN gephyrin -0.0282965
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0273656
EIF1 eukaryotic translation initiation factor 1 -0.0273477
ACTG1 actin gamma 1 -0.0273356
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0273017
DEK DEK proto-oncogene -0.0271277
RPLP1 ribosomal protein, large, P1 -0.0269335
AHCYL1 adenosylhomocysteinase-like 1 -0.0268403
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0266425
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0266265
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0266101
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0264076
HMGA1 high mobility group AT-hook 1 -0.0262809
FHIT fragile histidine triad -0.0260077
ENO2 enolase 2 (gamma, neuronal) -0.0258398
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.025796
MAP4 microtubule-associated protein 4 -0.0254396
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0253216
NAP1L1 nucleosome assembly protein 1-like 1 -0.0252148
S100A9 S100 calcium binding protein A9 -0.0247983
RPS15 ribosomal protein S15 -0.0246809
DLG1 discs, large homolog 1 (Drosophila) -0.0246669
RPL8 ribosomal protein L8 -0.0246016
SRPK2 SRSF protein kinase 2 -0.0245583
RPL5 ribosomal protein L5 -0.0244324
CTTN cortactin -0.0243689
RPL37A ribosomal protein L37a -0.0242819
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0242579
RASAL2 RAS protein activator like 2 -0.024132
PRRC2C proline-rich coiled-coil 2C -0.0241081
CALR calreticulin -0.0239121
RBM25 RNA binding motif protein 25 -0.0238326
NKTR natural killer cell triggering receptor -0.0237908
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0237302
RPLP2 ribosomal protein, large, P2 -0.0237172
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0236824
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0235464
ENO1 enolase 1, (alpha) -0.0235069
EMP1 epithelial membrane protein 1 -0.0234479
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0231162
POLR2F polymerase (RNA) II (DNA directed) polypeptide F -0.0229972
WDR45B WD repeat domain 45B -0.022809
TXNRD1 thioredoxin reductase 1 -0.0226938
RPL34 ribosomal protein L34 -0.022513
CAMTA1 calmodulin binding transcription activator 1 -0.0222764
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0222328
FUS FUS RNA binding protein -0.0221011
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0220929
FSTL5 follistatin-like 5 -0.0220635
COMMD10 COMM domain containing 10 -0.0219507
HMGA2 high mobility group AT-hook 2 -0.021819
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0217736
SOX5 SRY (sex determining region Y)-box 5 -0.0217512
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.0216163