MBD4 Gene Set

Dataset MSigDB Cancer Gene Co-expression Modules
Category transcriptomics
Type co-expressed gene
Description methyl-CpG binding domain protein 4|The protein encoded by this gene is a member of a family of nuclear proteins related by the presence of a methyl-CpG binding domain (MBD). These proteins are capable of binding specifically to methylated DNA, and some members can also repress transcription from methylated gene promoters. This protein contains an MBD domain at the N-terminus that functions both in binding to methylated DNA and in protein interactions and a C-terminal mismatch-specific glycosylase domain that is involved in DNA repair. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2013] (NCBI Entrez Gene Database, 8930)
External Link http://www.broadinstitute.org/gsea/msigdb/cards/MORF_MBD4
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Genes

110 co-expressed genes for MBD4 from the MSigDB Cancer Gene Co-expression Modules dataset.

Symbol Name
ADAR adenosine deaminase, RNA-specific
AP2M1 adaptor-related protein complex 2, mu 1 subunit
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2
BAG5 BCL2-associated athanogene 5
BUD31 BUD31 homolog (S. cerevisiae)
C10ORF76 chromosome 10 open reading frame 76
CANX calnexin
CD47 CD47 molecule
CDV3 CDV3 homolog (mouse)
CFDP1 craniofacial development protein 1
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNIH1 cornichon family AMPA receptor auxiliary protein 1
COPB1 coatomer protein complex, subunit beta 1
COPS5 COP9 signalosome subunit 5
COX4I1 cytochrome c oxidase subunit IV isoform 1
COX5A cytochrome c oxidase subunit Va
COX7A2L cytochrome c oxidase subunit VIIa polypeptide 2 like
CTBP1 C-terminal binding protein 1
CTCF CCCTC-binding factor (zinc finger protein)
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DNPEP aspartyl aminopeptidase
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2
EBAG9 estrogen receptor binding site associated, antigen, 9
EIF4E2 eukaryotic translation initiation factor 4E family member 2
ENSA endosulfine alpha
FAM120A family with sequence similarity 120A
FAM20B family with sequence similarity 20, member B
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
GABARAPL2 GABA(A) receptor-associated protein-like 2
GMFB glia maturation factor, beta
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HSBP1 heat shock factor binding protein 1
ING3 inhibitor of growth family, member 3
INTS8 integrator complex subunit 8
IST1 increased sodium tolerance 1 homolog (yeast)
JUND jun D proto-oncogene
KARS lysyl-tRNA synthetase
KIAA1033 KIAA1033
LAMP2 lysosomal-associated membrane protein 2
MBD4 methyl-CpG binding domain protein 4
MDH1 malate dehydrogenase 1, NAD (soluble)
MTDH metadherin
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric
MYL12B myosin, light chain 12B, regulatory
NACA nascent polypeptide-associated complex alpha subunit
NDUFA1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa
NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa
NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
NEDD8 neural precursor cell expressed, developmentally down-regulated 8
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae)
PAPOLA poly(A) polymerase alpha
PDCD6 programmed cell death 6
PFDN5 prefoldin subunit 5
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme
PPP1R7 protein phosphatase 1, regulatory subunit 7
PPP6C protein phosphatase 6, catalytic subunit
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
PTMA prothymosin, alpha
RAB5A RAB5A, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RAD23B RAD23 homolog B (S. cerevisiae)
RALBP1 ralA binding protein 1
RNF115 ring finger protein 115
RNF6 ring finger protein (C3H2C3 type) 6
RPL22 ribosomal protein L22
RPL34 ribosomal protein L34
RPL35A ribosomal protein L35a
RPS23 ribosomal protein S23
RPS29 ribosomal protein S29
RPS8 ribosomal protein S8
RSRC2 arginine/serine-rich coiled-coil 2
SAP18 Sin3A-associated protein, 18kDa
SCAF11 SR-related CTD-associated factor 11
SEC13 SEC13 homolog (S. cerevisiae)
SETD3 SET domain containing 3
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SKP1 S-phase kinase-associated protein 1
SLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A1
SMG7 SMG7 nonsense mediated mRNA decay factor
SNX2 sorting nexin 2
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
SRP19 signal recognition particle 19kDa
SRP9 signal recognition particle 9kDa
STX16 syntaxin 16
SUMO1 small ubiquitin-like modifier 1
SYPL1 synaptophysin-like 1
TBCA tubulin folding cofactor A
TMED2 transmembrane emp24 domain trafficking protein 2
TUG1 taurine up-regulated 1 (non-protein coding)
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1
UBE4A ubiquitination factor E4A
UBR5 ubiquitin protein ligase E3 component n-recognin 5
UGP2 UDP-glucose pyrophosphorylase 2
UQCRB ubiquinol-cytochrome c reductase binding protein
URI1 URI1, prefoldin-like chaperone
URM1 ubiquitin related modifier 1
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
UXT ubiquitously-expressed, prefoldin-like chaperone
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
YY1 YY1 transcription factor