MC-IXC Gene Set
Genes
27 genes with high or low copy number in MC-IXC relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
|
HHLA1
|
HERV-H LTR-associating 1
|
2.21258
|
|
OC90
|
otoconin 90
|
2.21096
|
|
EFR3A
|
EFR3 homolog A (S. cerevisiae)
|
2.21096
|
|
ADCY8
|
adenylate cyclase 8 (brain)
|
2.19301
|
|
CCDC26
|
CCDC26 long non-coding RNA
|
2.16091
|
|
MIR1206
|
microRNA 1206
|
2.07612
|
|
MIR1207
|
microRNA 1207
|
2.07136
|
|
MIR1205
|
microRNA 1205
|
2.07136
|
|
MIR1208
|
microRNA 1208
|
2.07136
|
|
TMEM75
|
transmembrane protein 75
|
2.06401
|
|
POU5F1B
|
POU class 5 homeobox 1B
|
2.05836
|
|
SLA
|
Src-like-adaptor
|
2.05778
|
|
HPYR1
|
Helicobacter pylori responsive 1 (non-protein coding)
|
2.05635
|
|
LRRC6
|
leucine rich repeat containing 6
|
2.0557
|
|
PHF20L1
|
PHD finger protein 20-like 1
|
2.05441
|
|
TMEM71
|
transmembrane protein 71
|
2.05422
|
|
TG
|
thyroglobulin
|
2.054
|
|
KCNQ3
|
potassium channel, voltage gated KQT-like subfamily Q, member 3
|
2.054
|
|
MIR1204
|
microRNA 1204
|
2.04661
|
|
PVT1
|
Pvt1 oncogene (non-protein coding)
|
2.04585
|
low copy number
| Symbol |
Name |
Standardized Value |
|
ATAD1
|
ATPase family, AAA domain containing 1
|
-3.47205
|
|
CFL1P1
|
cofilin 1 (non-muscle) pseudogene 1
|
-3.47102
|
|
KLLN
|
killin, p53-regulated DNA replication inhibitor
|
-3.46614
|
|
PTEN
|
phosphatase and tensin homolog
|
-3.45826
|
|
SMA4
|
glucuronidase, beta pseudogene
|
-3.24687
|
|
NAIP
|
NLR family, apoptosis inhibitory protein
|
-3.24687
|
|
RAB9BP1
|
RAB9B, member RAS oncogene family pseudogene 1
|
-3.03082
|
