MDA-MB-436 Gene Set
Genes
31 genes with high or low copy number in MDA-MB-436 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
high copy number
| Symbol |
Name |
Standardized Value |
low copy number
| Symbol |
Name |
Standardized Value |
|
SLIT3
|
slit homolog 3 (Drosophila)
|
-3.83684
|
|
ZDHHC15
|
zinc finger, DHHC-type containing 15
|
-3.7119
|
|
BBS9
|
Bardet-Biedl syndrome 9
|
-3.41265
|
|
NT5C3A
|
5'-nucleotidase, cytosolic IIIA
|
-3.41265
|
|
RP9
|
retinitis pigmentosa 9 (autosomal dominant)
|
-3.41265
|
|
FKBP9
|
FK506 binding protein 9, 63 kDa
|
-3.41265
|
|
LINC00265
|
long intergenic non-protein coding RNA 265
|
-3.40381
|
|
CEP128
|
centrosomal protein 128kDa
|
-3.38669
|
|
DIO2-AS1
|
DIO2 antisense RNA 1
|
-3.38669
|
|
DHX34
|
DEAH (Asp-Glu-Ala-His) box polypeptide 34
|
-3.29865
|
|
C5AR2
|
complement component 5a receptor 2
|
-3.29865
|
|
C5AR1
|
complement component 5a receptor 1
|
-3.29865
|
|
PCDH9-AS2
|
PCDH9 antisense RNA 2
|
-3.2703
|
|
PCDH9-AS3
|
PCDH9 antisense RNA 3
|
-3.2703
|
|
HDGFRP3
|
hepatoma-derived growth factor, related protein 3
|
-3.24687
|
|
BNC1
|
basonuclin 1
|
-3.24687
|
|
AVL9
|
AVL9 homolog (S. cerevisiase)
|
-3.18157
|
|
ZFYVE26
|
zinc finger, FYVE domain containing 26
|
-3.15836
|
|
RAD51B
|
RAD51 paralog B
|
-3.15836
|
|
LOC647264
|
keratin-associated protein 6-2
|
-3.15179
|
|
OR7E156P
|
olfactory receptor, family 7, subfamily E, member 156 pseudogene
|
-3.15179
|
|
PCDH9
|
protocadherin 9
|
-3.15179
|
|
FSTL5
|
follistatin-like 5
|
-3.12964
|
|
DLEU1
|
deleted in lymphocytic leukemia 1 (non-protein coding)
|
-3.00044
|
|
VCX2
|
variable charge, X-linked 2
|
-2.87269
|
|
MIR651
|
microRNA 651
|
-2.86624
|
|
LINC00221
|
long intergenic non-protein coding RNA 221
|
-2.84895
|
|
CCSER1
|
coiled-coil serine-rich protein 1
|
-2.82606
|
|
MACROD2
|
MACRO domain containing 2
|
-2.81481
|
|
MACROD2-AS1
|
MACROD2 antisense RNA 1
|
-2.81384
|
|
BTNL3
|
butyrophilin-like 3
|
-2.72661
|
