MDA-MB-468 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

63 genes with high or low copy number in MDA-MB-468 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
LOC100130849 phosphorylase kinase, gamma 1 (muscle) pseudogene 2.30944
MIR3147 microRNA 3147 2.30944
LOC650226 ankyrin repeat domain 26 pseudogene 2.283
DKFZP434L192 uncharacterized protein DKFZp434L192 2.283
GUSBP10 glucuronidase, beta pseudogene 10 2.283
ZNF716 zinc finger protein 716 2.283
MIR4283-1 microRNA 4283-1 2.25904
PHKG1 phosphorylase kinase, gamma 1 (muscle) 2.24845
PSPH phosphoserine phosphatase 2.24845
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 2.24845
SUMF2 sulfatase modifying factor 2 2.24845
SNORA15 small nucleolar RNA, H/ACA box 15 2.24845
NUPR1L nuclear protein, transcriptional regulator, 1-like 2.24845
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 2.24845
MRPS17 mitochondrial ribosomal protein S17 2.24139
GBAS glioblastoma amplified sequence 2.24139
ZNF713 zinc finger protein 713 2.24139
SEPT14 septin 14 2.2355
SNORA22 small nucleolar RNA, H/ACA box 22 2.23078
VSTM2A V-set and transmembrane domain containing 2A 2.22633
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2.22123
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 2.21727
SEC61G Sec61 gamma subunit 2.21727
EGFR-AS1 EGFR antisense RNA 1 2.21096
EGFR epidermal growth factor receptor 2.20309
ZNF479 zinc finger protein 479 2.0731

low copy number

Symbol Name Standardized Value
ZNF500 zinc finger protein 500 -5.12655
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis) -5.12655
ROGDI rogdi homolog (Drosophila) -5.12655
ZNF280D zinc finger protein 280D -5.12655
TCF12 transcription factor 12 -5.12655
PPL periplakin -5.12655
HMOX2 heme oxygenase 2 -5.12655
C16ORF96 chromosome 16 open reading frame 96 -5.12655
C16ORF71 chromosome 16 open reading frame 71 -5.12655
UBALD1 UBA-like domain containing 1 -5.12655
UBN1 ubinuclein 1 -5.12655
CDIP1 cell death-inducing p53 target 1 -5.12655
SEPT12 septin 12 -5.12655
LOC145783 uncharacterized LOC145783 -3.83684
ANKS3 ankyrin repeat and sterile alpha motif domain containing 3 -3.83684
MGRN1 mahogunin ring finger 1, E3 ubiquitin protein ligase -3.83684
NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 -3.83684
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion -3.47623
DKFZP434L187 uncharacterized LOC26082 -3.47486
KRT33B keratin 33B, type I -3.36169
SLC6A10P solute carrier family 6 (neurotransmitter transporter), member 10, pseudogene -3.14331
IGH immunoglobulin heavy locus -3.07287
DHRS4L1 dehydrogenase/reductase (SDR family) member 4 like 1 -3.0386
DHRS4 dehydrogenase/reductase (SDR family) member 4 -3.03592
DHRS4L2 dehydrogenase/reductase (SDR family) member 4 like 2 -3.03592
GSTTP1 glutathione S-transferase theta pseudogene 1 -2.86117
ELAC1 elaC ribonuclease Z 1 -2.86054
LPAR6 lysophosphatidic acid receptor 6 -2.85279
OR52N5 olfactory receptor, family 52, subfamily N, member 5 -2.84224
RB1 retinoblastoma 1 -2.83092
FAM66A family with sequence similarity 66, member A -2.82872
SMAD4 SMAD family member 4 -2.82872
LOC649352 ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like -2.80262
GSTT1 glutathione S-transferase theta 1 -2.78432
LOC391322 D-dopachrome tautomerase-like -2.78432
GSTTP2 glutathione S-transferase theta pseudogene 2 -2.78432
OR52N1 olfactory receptor, family 52, subfamily N, member 1 -2.73524