MDAMB231 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

233 genes with high or low expression in MDAMB231 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
C6ORF52 chromosome 6 open reading frame 52 3.36815
PLP2 proteolipid protein 2 (colonic epithelium-enriched) 3.00786
MEA1 male-enhanced antigen 1 2.92837
FAM170B family with sequence similarity 170, member B 2.49887
COL13A1 collagen, type XIII, alpha 1 2.35398
MRPL14 mitochondrial ribosomal protein L14 2.28819
C11ORF44 chromosome 11 open reading frame 44 2.27574
CCRL2 chemokine (C-C motif) receptor-like 2 2.25958
ZFAND3 zinc finger, AN1-type domain 3 2.23924
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae) 2.16101
MTCH1 mitochondrial carrier 1 2.14449
NOL7 nucleolar protein 7, 27kDa 2.13071
MCFD2 multiple coagulation factor deficiency 2 2.11351
PPP2R5D protein phosphatase 2, regulatory subunit B', delta 2.08132
RPPH1 ribonuclease P RNA component H1 2.05468
CUTA cutA divalent cation tolerance homolog (E. coli) 2.00473
ADGRE5 adhesion G protein-coupled receptor E5 1.99977
TTC12 tetratricopeptide repeat domain 12 1.98565
NOX5 NADPH oxidase, EF-hand calcium binding domain 5 1.95898
LOC285819 uncharacterized LOC285819 1.95344
EVI5 ecotropic viral integration site 5 1.94121
ERMARD ER membrane-associated RNA degradation 1.89842
MORC4 MORC family CW-type zinc finger 4 1.86204
DGCR10 DiGeorge syndrome critical region gene 10 (non-protein coding) 1.84547
CST2 cystatin SA 1.81427
CLCN4 chloride channel, voltage-sensitive 4 1.79653
LOC100507506 uncharacterized LOC100507506 1.78048
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1 1.77783
EHD1 EH-domain containing 1 1.77595
RPP30 ribonuclease P/MRP 30kDa subunit 1.76671
CLIC1 chloride intracellular channel 1 1.7596
TRIM61 tripartite motif containing 61 1.74693
ZDHHC16 zinc finger, DHHC-type containing 16 1.74527
CST4 cystatin S 1.74471
C1ORF110 chromosome 1 open reading frame 110 1.72217
CRTAM cytotoxic and regulatory T cell molecule 1.71383
ZFYVE28 zinc finger, FYVE domain containing 28 1.71272
EIF6 eukaryotic translation initiation factor 6 1.70808
SNRPC small nuclear ribonucleoprotein polypeptide C 1.69329
CEP250 centrosomal protein 250kDa 1.68905
FOXP4 forkhead box P4 1.68328
CA5BP1 carbonic anhydrase VB pseudogene 1 1.67741
TOMM6 translocase of outer mitochondrial membrane 6 homolog (yeast) 1.65142
STK19 serine/threonine kinase 19 1.65011
ESAM endothelial cell adhesion molecule 1.64829
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa 1.64222
CLCA1 chloride channel accessory 1 1.64089
FPR1 formyl peptide receptor 1 1.64039
MRPS10 mitochondrial ribosomal protein S10 1.62959
CPOX coproporphyrinogen oxidase 1.61942
HYI hydroxypyruvate isomerase (putative) 1.61676
PLCZ1 phospholipase C, zeta 1 1.61485
C6ORF226 chromosome 6 open reading frame 226 1.60973
C9ORF89 chromosome 9 open reading frame 89 1.59457
MED20 mediator complex subunit 20 1.57648
C4BPB complement component 4 binding protein, beta 1.5723
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 1.56972
LOC100506895 uncharacterized LOC100506895 1.56803
BAD BCL2-associated agonist of cell death 1.5535
C6ORF1 chromosome 6 open reading frame 1 1.55144
LOC100130938 1.54971
CCDC85B coiled-coil domain containing 85B 1.54224
RNF8 ring finger protein 8, E3 ubiquitin protein ligase 1.54019
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 1.53494
SPTLC3 serine palmitoyltransferase, long chain base subunit 3 1.51707
ROR1 receptor tyrosine kinase-like orphan receptor 1 1.51601
CLIC6 chloride intracellular channel 6 1.51412
MAP7D3 MAP7 domain containing 3 1.5134
TLR8-AS1 TLR8 antisense RNA 1 1.50486
RHEB Ras homolog enriched in brain 1.50253
ADGRF5 adhesion G protein-coupled receptor F5 1.5018
HPCAL1 hippocalcin-like 1 1.50108
TMEM99 transmembrane protein 99 1.49644
BYSL bystin-like 1.48751
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) 1.4851
NSAP11 nervous system abundant protein 11 1.47609
MYEOV myeloma overexpressed 1.46774
ECI2 enoyl-CoA delta isomerase 2 1.46182
ACOT9 acyl-CoA thioesterase 9 1.45745
COQ4 coenzyme Q4 1.45584
PHYHD1 phytanoyl-CoA dioxygenase domain containing 1 1.4528
ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 1.45261
ZNF76 zinc finger protein 76 1.45139
GPR1 G protein-coupled receptor 1 1.44832
MB21D1 Mab-21 domain containing 1 1.44798
BTN2A1 butyrophilin, subfamily 2, member A1 1.44234
ARAF A-Raf proto-oncogene, serine/threonine kinase 1.43646
E2F7 E2F transcription factor 7 1.43617
HYLS1 hydrolethalus syndrome 1 1.4274
KRBOX1 KRAB box domain containing 1 1.42382
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 1.42358
C2ORF61 chromosome 2 open reading frame 61 1.42293
KLHDC3 kelch domain containing 3 1.41875
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 1.41769
HYDIN HYDIN, axonemal central pair apparatus protein 1.41539
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 1.41528
UNC13D unc-13 homolog D (C. elegans) 1.41027
DNMBP dynamin binding protein 1.40787
ZNF175 zinc finger protein 175 1.40261
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 1.40079
OARD1 O-acyl-ADP-ribose deacylase 1 1.39809
MAEL maelstrom spermatogenic transposon silencer 1.39247
TRERF1 transcriptional regulating factor 1 1.38484
PGBD1 piggyBac transposable element derived 1 1.3847
PHF1 PHD finger protein 1 1.37332
KLHL4 kelch-like family member 4 1.37068
OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 1.37009
POC1A POC1 centriolar protein A 1.3654
EVI5L ecotropic viral integration site 5-like 1.36513
MYF5 myogenic factor 5 1.36287
ROMO1 reactive oxygen species modulator 1 1.36129
PCNXL4 pecanex-like 4 (Drosophila) 1.35964
MYH16 myosin, heavy chain 16 pseudogene 1.35931
GAS2L1 growth arrest-specific 2 like 1 1.35413
PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 1.35017

low expression

Symbol Name Standardized Value
MPPE1 metallophosphoesterase 1 -3.99874
CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 -3.3024
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) -3.06834
PREPL prolyl endopeptidase-like -2.99308
RNF139 ring finger protein 139 -2.95364
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) -2.78707
TM2D3 TM2 domain containing 3 -2.77658
ALOX15 arachidonate 15-lipoxygenase -2.76302
UGT2B15 UDP glucuronosyltransferase 2 family, polypeptide B15 -2.63228
FETUB fetuin B -2.57705
SH3GL2 SH3-domain GRB2-like 2 -2.47522
KDM4C lysine (K)-specific demethylase 4C -2.45403
ATMIN ATM interactor -2.43728
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa -2.41313
RBPJL recombination signal binding protein for immunoglobulin kappa J region-like -2.33948
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative) -2.30793
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -2.30764
TBC1D21 TBC1 domain family, member 21 -2.28906
SH2D6 SH2 domain containing 6 -2.23255
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae) -2.23074
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) -2.2215
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2 -2.20785
RAD21-AS1 RAD21 antisense RNA 1 -2.17597
C1ORF131 chromosome 1 open reading frame 131 -2.17148
GCM2 glial cells missing homolog 2 (Drosophila) -2.16278
WDR59 WD repeat domain 59 -2.15019
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -2.11476
RNF187 ring finger protein 187 -2.09727
SCN8A sodium channel, voltage gated, type VIII alpha subunit -2.05171
FAM117B family with sequence similarity 117, member B -2.04618
NKX2-1-AS1 NKX2-1 antisense RNA 1 -2.02296
RHOT1 ras homolog family member T1 -2.01634
TMCC1 transmembrane and coiled-coil domain family 1 -2.01267
NELL2 NEL-like 2 (chicken) -2.00791
THAP7-AS1 THAP7 antisense RNA 1 -2.00139
PROC protein C (inactivator of coagulation factors Va and VIIIa) -1.99892
KCNJ6 potassium channel, inwardly rectifying subfamily J, member 6 -1.97185
LINC00494 long intergenic non-protein coding RNA 494 -1.95151
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 -1.92137
KIAA0196 KIAA0196 -1.9058
DUOXA1 dual oxidase maturation factor 1 -1.88188
ZNF12 zinc finger protein 12 -1.85977
TEKT2 tektin 2 (testicular) -1.85874
NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 -1.8304
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 -1.82879
PUS10 pseudouridylate synthase 10 -1.8277
LEMD3 LEM domain containing 3 -1.81593
HIST1H2AK histone cluster 1, H2ak -1.80566
ATXN7L3B ataxin 7-like 3B -1.80075
FLJ22763 uncharacterized LOC401081 -1.78956
LOC100505811 uncharacterized LOC100505811 -1.78092
SQLE squalene epoxidase -1.77888
WDR61 WD repeat domain 61 -1.77412
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) -1.7681
NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa -1.7575
SRY sex determining region Y -1.75686
FASTKD1 FAST kinase domains 1 -1.74369
MAN2C1 mannosidase, alpha, class 2C, member 1 -1.74303
KLHL12 kelch-like family member 12 -1.73359
PTH2R parathyroid hormone 2 receptor -1.73269
SLC19A1 solute carrier family 19 (folate transporter), member 1 -1.72904
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -1.72774
DHRS4-AS1 DHRS4 antisense RNA 1 -1.72406
NLRP14 NLR family, pyrin domain containing 14 -1.71182
GSK3B glycogen synthase kinase 3 beta -1.70019
PIK3R4 phosphoinositide-3-kinase, regulatory subunit 4 -1.69201
SVOP SV2 related protein homolog (rat) -1.69146
BRD1 bromodomain containing 1 -1.69073
CNTN6 contactin 6 -1.67746
IQCB1 IQ motif containing B1 -1.67495
CCDC87 coiled-coil domain containing 87 -1.67436
VMO1 vitelline membrane outer layer 1 homolog (chicken) -1.66892
ZNF638 zinc finger protein 638 -1.65262
OR51B4 olfactory receptor, family 51, subfamily B, member 4 -1.64188
KLHL42 kelch-like family member 42 -1.63067
TDRD9 tudor domain containing 9 -1.62466
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase -1.61843
FAM149B1 family with sequence similarity 149, member B1 -1.61602
BNIPL BCL2/adenovirus E1B 19kD interacting protein like -1.61434
HIST1H4E histone cluster 1, H4e -1.60995
FLJ33360 FLJ33360 protein -1.60497
NF2 neurofibromin 2 (merlin) -1.60349
FOCAD focadhesin -1.6001
INTS3 integrator complex subunit 3 -1.5988
LIPJ lipase, family member J -1.58656
CRYGC crystallin, gamma C -1.57392
RNF186 ring finger protein 186 -1.57126
NLRC4 NLR family, CARD domain containing 4 -1.57051
IFNA21 interferon, alpha 21 -1.56831
SNHG20 small nucleolar RNA host gene 20 -1.5644
SLC6A16 solute carrier family 6, member 16 -1.56049
XCL1 chemokine (C motif) ligand 1 -1.55415
CEP68 centrosomal protein 68kDa -1.5534
DNAJC3-AS1 DNAJC3 antisense RNA 1 (head to head) -1.55265
PKD2L2 polycystic kidney disease 2-like 2 -1.55177
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) -1.54499
INTS1 integrator complex subunit 1 -1.53908
TIA1 TIA1 cytotoxic granule-associated RNA binding protein -1.53442
FOXS1 forkhead box S1 -1.52973
ANGEL1 angel homolog 1 (Drosophila) -1.51836
FUBP1 far upstream element (FUSE) binding protein 1 -1.51778
NMD3 NMD3 ribosome export adaptor -1.51765
UBFD1 ubiquitin family domain containing 1 -1.51649
PARN poly(A)-specific ribonuclease -1.51194
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -1.50496
NSUN4 NOP2/Sun domain family, member 4 -1.49719
RPE ribulose-5-phosphate-3-epimerase -1.49663
XPC xeroderma pigmentosum, complementation group C -1.49645
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa -1.49401
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -1.49243
RBM4B RNA binding motif protein 4B -1.49188
TPPP tubulin polymerization promoting protein -1.49044
EPYC epiphycan -1.48682
HHLA3 HERV-H LTR-associating 3 -1.47346
LALBA lactalbumin, alpha- -1.47171
RHBDL1 rhomboid, veinlet-like 1 (Drosophila) -1.46985
TBCK TBC1 domain containing kinase -1.46096
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae) -1.46047