ME-180 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: epidermoid carcinoma (cervix primary) (Cell Line Ontology, CLO_0007657)
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Genes

588 genes with high or low copy number in ME-180 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
NINJ1 ninjurin 1 4.51153
PALM2 paralemmin 2 4.51153
FRRS1L ferric-chelate reductase 1-like 4.51153
OR13F1 olfactory receptor, family 13, subfamily F, member 1 4.51153
TRIM14 tripartite motif containing 14 4.51153
TXNDC8 thioredoxin domain containing 8 (spermatozoa) 4.51153
C9ORF57 chromosome 9 open reading frame 57 4.51153
PALM2-AKAP2 PALM2-AKAP2 readthrough 4.51153
SLC46A2 solute carrier family 46, member 2 4.51153
NANS N-acetylneuraminic acid synthase 4.51153
TMEM246 transmembrane protein 246 4.51153
TMEM245 transmembrane protein 245 4.51153
AGTPBP1 ATP/GTP binding protein 1 4.51153
STOX1 storkhead box 1 4.51153
MRPL50 mitochondrial ribosomal protein L50 4.51153
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 4.51153
PRPF4 pre-mRNA processing factor 4 4.51153
ZNF462 zinc finger protein 462 4.51153
PTPN3 protein tyrosine phosphatase, non-receptor type 3 4.51153
RORB RAR-related orphan receptor B 4.51153
NIPSNAP3A nipsnap homolog 3A (C. elegans) 4.51153
NIPSNAP3B nipsnap homolog 3B (C. elegans) 4.51153
PPP3R2 protein phosphatase 3, regulatory subunit B, beta 4.51153
CDK5RAP2 CDK5 regulatory subunit associated protein 2 4.51153
GDA guanine deaminase 4.51153
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 4.51153
WDR31 WD repeat domain 31 4.51153
FAM206A family with sequence similarity 206, member A 4.51153
SNX30 sorting nexin family member 30 4.51153
SNORD98 small nucleolar RNA, C/D box 98 4.51153
MIR3074 microRNA 3074 4.51153
AKAP2 A kinase (PRKA) anchor protein 2 4.51153
LPPR1 lipid phosphate phosphatase-related protein type 1 4.51153
KLF4 Kruppel-like factor 4 (gut) 4.51153
EPB41L4B erythrocyte membrane protein band 4.1 like 4B 4.51153
MIR3134 microRNA 3134 4.51153
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 4.51153
MEGF9 multiple EGF-like-domains 9 4.51153
RAD23B RAD23 homolog B (S. cerevisiae) 4.51153
IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein 4.51153
KIAA1958 KIAA1958 4.51153
CCAR1 cell division cycle and apoptosis regulator 1 4.51153
GAS1 growth arrest-specific 1 4.51153
GNG10 guanine nucleotide binding protein (G protein), gamma 10 4.51153
BSPRY B-box and SPRY domain containing 4.51153
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 4.51153
C9ORF84 chromosome 9 open reading frame 84 4.51153
C9ORF89 chromosome 9 open reading frame 89 4.51153
OR13C4 olfactory receptor, family 13, subfamily C, member 4 4.51153
OR13C5 olfactory receptor, family 13, subfamily C, member 5 4.51153
OR13C2 olfactory receptor, family 13, subfamily C, member 2 4.51153
KIAA0368 KIAA0368 4.51153
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 4.51153
C9ORF152 chromosome 9 open reading frame 152 4.51153
INIP INTS3 and NABP interacting protein 4.51153
DNAJC25-GNG10 DNAJC25-GNG10 readthrough 4.51153
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 4.51153
ZFAND5 zinc finger, AN1-type domain 5 4.51153
ACTL7B actin-like 7B 4.51153
UGCG UDP-glucose ceramide glucosyltransferase 4.51153
ACTL7A actin-like 7A 4.51153
CORO2A coronin, actin binding protein, 2A 4.51153
FBXW2 F-box and WD repeat domain containing 2 4.51153
OR13C3 olfactory receptor, family 13, subfamily C, member 3 4.51153
OR13C8 olfactory receptor, family 13, subfamily C, member 8 4.51153
ZNF483 zinc finger protein 483 4.51153
CDC26 cell division cycle 26 4.51153
ZNF883 zinc finger protein 883 4.51153
WNK2 WNK lysine deficient protein kinase 2 4.51153
MIR32 microRNA 32 4.51153
SEC61B Sec61 beta subunit 4.51153
NAMA non-protein coding RNA, associated with MAP kinase pathway and growth arrest 4.51153
MUSK muscle, skeletal, receptor tyrosine kinase 4.51153
PTBP3 polypyrimidine tract binding protein 3 4.51153
DIRAS2 DIRAS family, GTP-binding RAS-like 2 4.51153
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 4.51153
ZNF189 zinc finger protein 189 4.51153
OR13C9 olfactory receptor, family 13, subfamily C, member 9 4.51153
TET1 tet methylcytosine dioxygenase 1 4.51153
BAAT bile acid CoA:amino acid N-acyltransferase 4.51153
ZFP37 ZFP37 zinc finger protein 4.51153
SUSD3 sushi domain containing 3 4.51153
TXN thioredoxin 4.51153
SUSD1 sushi domain containing 1 4.51153
OR13D1 olfactory receptor, family 13, subfamily D, member 1 4.51153
TRPM6 transient receptor potential cation channel, subfamily M, member 6 4.51153
LOC100507346 uncharacterized LOC100507346 4.51153
LOC286367 4.51153
PHF19 PHD finger protein 19 4.51153
PTGR1 prostaglandin reductase 1 4.51153
LOC100506834 uncharacterized LOC100506834 4.51153
C5 complement component 5 4.51153
HSDL2 hydroxysteroid dehydrogenase like 2 4.51153
FKBP15 FK506 binding protein 15, 133kDa 4.51153
LRRC37A5P leucine rich repeat containing 37, member A5, pseudogene 4.51153
LOC100288842 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 pseudogene 4.51153
SLC31A1 solute carrier family 31 (copper transporter), member 1 4.51153
LOC389765 kinesin family member 27 pseudogene 4.51153
C9ORF40 chromosome 9 open reading frame 40 4.51153
C9ORF41 chromosome 9 open reading frame 41 4.51153
ALG2 ALG2, alpha-1,3/1,6-mannosyltransferase 4.51153
FAM225A family with sequence similarity 225, member A (non-protein coding) 4.51153
MIR548Q microRNA 548q 4.51153
RNF20 ring finger protein 20, E3 ubiquitin protein ligase 4.51153
LOC440173 uncharacterized LOC440173 4.51153
MIR23B microRNA 23b 4.51153
SMC2 structural maintenance of chromosomes 2 4.51153
ALDOB aldolase B, fructose-bisphosphate 4.51153
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 4.51153
TBC1D2 TBC1 domain family, member 2 4.51153
PTCH1 patched 1 4.51153
RNF183 ring finger protein 183 4.51153
LPAR1 lysophosphatidic acid receptor 1 4.51153
OR2K2 olfactory receptor, family 2, subfamily K, member 2 4.51153
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A 4.51153
SLC31A2 solute carrier family 31 (copper transporter), member 2 4.51153
MIR4668 microRNA 4668 4.51153
INVS inversin 3.12177
LOC100128076 protein tyrosine phosphatase pseudogene 3.12177
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene 3.12177
PPA1 pyrophosphatase (inorganic) 1 3.12177
TRIM32 tripartite motif containing 32 3.12177
PCA3 prostate cancer associated 3 (non-protein coding) 3.12177
ASPN asporin 3.12177
FAM120A family with sequence similarity 120A 3.12177
STOM stomatin 3.12177
AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2 3.12177
RASEF RAS and EF-hand domain containing 3.12177
LOC286359 uncharacterized LOC286359 3.12177
PRUNE2 prune homolog 2 (Drosophila) 3.12177
NOL8 nucleolar protein 8 3.12177
CEP78 centrosomal protein 78kDa 3.12177
LOC100132781 cyclin Y-like 1 pseudogene 3.12177
NCBP1 nuclear cap binding protein subunit 1, 80kDa 3.12177
LOC100132077 uncharacterized LOC100132077 3.12177
NUTM2F NUT family member 2F 3.12177
ANXA1 annexin A1 3.12177
ZNF510 zinc finger protein 510 3.12177
HIATL1 hippocampus abundant transcript-like 1 3.12177
HIATL2 hippocampus abundant transcript-like 2 3.12177
PALD1 phosphatase domain containing, paladin 1 3.12177
SPTLC1 serine palmitoyltransferase, long chain base subunit 1 3.12177
SAR1A secretion associated, Ras related GTPase 1A 3.12177
MIR548H3 microRNA 548h-3 3.12177
NUTM2G NUT family member 2G 3.12177
LOC100499484-C9ORF174 LOC100499484-C9orf174 readthrough 3.12177
KIF27 kinesin family member 27 3.12177
FAM120AOS family with sequence similarity 120A opposite strand 3.12177
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 3.12177
TDRD7 tudor domain containing 7 3.12177
MIRLET7A1 microRNA let-7a-1 3.12177
MIRLET7F1 microRNA let-7f-1 3.12177
MURC muscle-related coiled-coil protein 3.12177
PTPDC1 protein tyrosine phosphatase domain containing 1 3.12177
MIRLET7DHG MIRLET7D host gene 3.12177
LRRC20 leucine rich repeat containing 20 3.12177
SNORA84 small nucleolar RNA, H/ACA box 84 3.12177
XPA xeroderma pigmentosum, complementation group A 3.12177
TMOD1 tropomodulin 1 3.12177
NEUROG3 neurogenin 3 3.12177
TBATA thymus, brain and testes associated 3.12177
ERP44 endoplasmic reticulum protein 44 3.12177
RMI1 RecQ mediated genome instability 1 3.12177
VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 3.12177
SLC28A3 solute carrier family 28 (concentrative nucleoside transporter), member 3 3.12177
TMC1 transmembrane channel-like 1 3.12177
NR4A3 nuclear receptor subfamily 4, group A, member 3 3.12177
ANKRD19P ankyrin repeat domain 19, pseudogene 3.12177
ZNF169 zinc finger protein 169 3.12177
EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 3.12177
IARS isoleucyl-tRNA synthetase 3.12177
LINC00475 long intergenic non-protein coding RNA 475 3.12177
SRGN serglycin 3.12177
TSPAN15 tetraspanin 15 3.12177
CDC14B cell division cycle 14B 3.12177
OGN osteoglycin 3.12177
LOC100499484 SUGT1-1300002K09Rik pseudogene 3.12177
PSAT1 phosphoserine aminotransferase 1 3.12177
SUPV3L1 suppressor of var1, 3-like 1 (S. cerevisiae) 3.12177
STX17 syntaxin 17 3.12177
PCSK5 proprotein convertase subtilisin/kexin type 5 3.12177
KIF1BP KIF1 binding protein 3.12177
H2AFY2 H2A histone family, member Y2 3.12177
IDNK idnK, gluconokinase homolog (E. coli) 3.12177
ZNF484 zinc finger protein 484 3.12177
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 3.12177
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 3.12177
ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 3.12177
FOXB2 forkhead box B2 3.12177
SYK spleen tyrosine kinase 3.12177
NFIL3 nuclear factor, interleukin 3 regulated 3.12177
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 3.12177
HKDC1 hexokinase domain containing 1 3.12177
HK1 hexokinase 1 3.12177
UBQLN1 ubiquilin 1 3.12177
FGD3 FYVE, RhoGEF and PH domain containing 3 3.12177
MIR4291 microRNA 4291 3.12177
AUH AU RNA binding protein/enoyl-CoA hydratase 3.12177
HNRNPK heterogeneous nuclear ribonucleoprotein K 3.12177
BICD2 bicaudal D homolog 2 (Drosophila) 3.12177
LOC441454 prothymosin, alpha pseudogene 3.12177
RFK riboflavin kinase 3.12177
LOC441455 makorin ring finger protein 1 pseudogene 3.12177
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 3.12177
NPFFR1 neuropeptide FF receptor 1 3.12177
RPSAP9 ribosomal protein SA pseudogene 9 3.12177
FBP2 fructose-1,6-bisphosphatase 2 3.12177
LOC100129316 uncharacterized LOC100129316 3.12177
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 3.12177
MIR7-1 microRNA 7-1 3.12177
AAED1 AhpC/TSA antioxidant enzyme domain containing 1 3.12177
NAA35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit 3.12177
NODAL nodal growth differentiation factor 3.12177
HABP4 hyaluronan binding protein 4 3.12177
ZNF782 zinc finger protein 782 3.12177
TEX10 testis expressed 10 3.12177
FBP1 fructose-1,6-bisphosphatase 1 3.12177
C9ORF64 chromosome 9 open reading frame 64 3.12177
FRMD3 FERM domain containing 3 3.12177
MIRLET7D microRNA let-7d 3.12177
MIR2278 microRNA 2278 3.12177
GSN gelsolin 3.12177
RAB14 RAB14, member RAS oncogene family 3.12177
OMD osteomodulin 3.12177
TYSND1 trypsin domain containing 1 3.12177
TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1 3.12177
GKAP1 G kinase anchoring protein 1 3.12177
CNTRL centriolin 3.12177
ROR2 receptor tyrosine kinase-like orphan receptor 2 3.12177
MIR3910-2 microRNA 3910-2 3.12177
MIR4670 microRNA 4670 3.12177
C9ORF3 chromosome 9 open reading frame 3 3.12177
MIR3910-1 microRNA 3910-1 3.12177
PHF2 PHD finger protein 2 3.12177
COL13A1 collagen, type XIII, alpha 1 3.12177
CCDC180 coiled-coil domain containing 180 3.12177
ECM2 extracellular matrix protein 2, female organ and adipocyte specific 3.12177
C10ORF35 chromosome 10 open reading frame 35 3.12177
PRF1 perforin 1 (pore forming protein) 3.12177
TLE4 transducin-like enhancer of split 4 3.12177
GNA14 guanine nucleotide binding protein (G protein), alpha 14 3.12177
TACR2 tachykinin receptor 2 3.12177
SNORA70C small nucleolar RNA, H/ACA box 70C 3.12177
BARX1 BARX homeobox 1 3.12177
C9ORF129 chromosome 9 open reading frame 129 3.12177
HSD17B3 hydroxysteroid (17-beta) dehydrogenase 3 3.12177
ZNF367 zinc finger protein 367 3.12177
FOXE1 forkhead box E1 2.93899
OR1N1 olfactory receptor, family 1, subfamily N, member 1 2.93899
OR1N2 olfactory receptor, family 1, subfamily N, member 2 2.93899
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16 2.93899
SPATA31D5P SPATA31 subfamily D, member 5, pseudogene 2.93899
MIR4478 microRNA 4478 2.93899
DAB2IP DAB2 interacting protein 2.93899
DDIT4 DNA-damage-inducible transcript 4 2.93899
OR1L8 olfactory receptor, family 1, subfamily L, member 8 2.93899
STRBP spermatid perinuclear RNA binding protein 2.93899
LHX6 LIM homeobox 6 2.93899
C9ORF156 chromosome 9 open reading frame 156 2.93899
ATOH7 atonal homolog 7 (Drosophila) 2.93899
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 2.93899
MRRF mitochondrial ribosome recycling factor 2.93899
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 2.93899
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12 2.93899
PBLD phenazine biosynthesis-like protein domain containing 2.93899
SPATA31D4 SPATA31 subfamily D, member 4 2.93899
SPATA31D3 SPATA31 subfamily D, member 3 2.93899
TTLL11 tubulin tyrosine ligase-like family member 11 2.93899
IPPK inositol 1,3,4,5,6-pentakisphosphate 2-kinase 2.93899
LRRTM3 leucine rich repeat transmembrane neuronal 3 2.93899
MYPN myopalladin 2.93899
MORN5 MORN repeat containing 5 2.93899
LOC100128361 uncharacterized LOC100128361 2.93899
OR1J1 olfactory receptor, family 1, subfamily J, member 1 2.93899
OR1J2 olfactory receptor, family 1, subfamily J, member 2 2.93899
VPS13A-AS1 VPS13A antisense RNA 1 2.93899
OR1J4 olfactory receptor, family 1, subfamily J, member 4 2.93899
RUFY2 RUN and FYVE domain containing 2 2.93899
HEMGN hemogen 2.93899
SIRT1 sirtuin 1 2.93899
NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa 2.93899
LINC00474 long intergenic non-protein coding RNA 474 2.93899
RBM18 RNA binding motif protein 18 2.93899
MIR600HG MIR600 host gene 2.93899
MICU1 mitochondrial calcium uptake 1 2.93899
DNA2 DNA replication helicase/nuclease 2 2.93899
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 2.93899
CENPP centromere protein P 2.93899
TLR4 toll-like receptor 4 2.93899
DNAJC12 DnaJ (Hsp40) homolog, subfamily C, member 12 2.93899
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 2.93899
ZNF322 zinc finger protein 322 2.76305
MIR4676 microRNA 4676 2.76305
MSS51 MSS51 mitochondrial translational activator 2.76305
PPP3CB protein phosphatase 3, catalytic subunit, beta isozyme 2.76305
MYOZ1 myozenin 1 2.76305
SYNPO2L synaptopodin 2-like 2.76305
PAPPA pregnancy-associated plasma protein A, pappalysin 1 2.76305
USP54 ubiquitin specific peptidase 54 2.76305
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 2.64759
FAM149B1 family with sequence similarity 149, member B1 2.64759
PLIN2 perilipin 2 2.64759
SCARNA8 small Cajal body-specific RNA 8 2.64759
HAUS6 HAUS augmin-like complex, subunit 6 2.64759
MCU mitochondrial calcium uniporter 2.64759
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1 2.64759
ZSWIM8 zinc finger, SWIM-type containing 8 2.64759
DNAJC9 DnaJ (Hsp40) homolog, subfamily C, member 9 2.64759
RRAGA Ras-related GTP binding A 2.64759
BMS1P4 BMS1 ribosome biogenesis factor pseudogene 4 2.64759
GLUD1P3 glutamate dehydrogenase 1 pseudogene 3 2.64759
NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 2.64759
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13 2.64759
SEC24C SEC24 family member C 2.64759
OIT3 oncoprotein induced transcript 3 2.64759
PLA2G12B phospholipase A2, group XIIB 2.64759
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 2.64759
AGAP5 ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 2.64759
ECD ecdysoneless homolog (Drosophila) 2.64759
JMJD1C-AS1 JMJD1C antisense RNA 1 2.64759
DNAJC9-AS1 DNAJC9 antisense RNA 1 2.64759
MRPS16 mitochondrial ribosomal protein S16 2.64759
RPS6 ribosomal protein S6 2.59653
JMJD1C jumonji domain containing 1C 2.59653
NRBF2 nuclear receptor binding factor 2 2.59653
DENND4C DENN/MADD domain containing 4C 2.59653
MIR1296 microRNA 1296 2.59653
LOC642361 uncharacterized LOC642361 2.49065
TTC39B tetratricopeptide repeat domain 39B 2.49065
ZNF365 zinc finger protein 365 2.49065
ZMIZ1-AS1 ZMIZ1 antisense RNA 1 2.49065
ADO 2-aminoethanethiol (cysteamine) dioxygenase 2.49065
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 2.49065
EGR2 early growth response 2 2.49065
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 2.49065
DLG5-AS1 DLG5 antisense RNA 1 2.44392
MBL1P mannose-binding lectin (protein A) 1, pseudogene 2.44392
DLG5 discs, large homolog 5 (Drosophila) 2.44392
LINC00856 long intergenic non-protein coding RNA 856 2.44392
PPIF peptidylprolyl isomerase F 2.44392
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2.44392
LINC00595 long intergenic non-protein coding RNA 595 2.44392
ZMIZ1 zinc finger, MIZ-type containing 1 2.44392
SFTPD surfactant protein D 2.44392
LOC100288974 2.44392
TMEM254 transmembrane protein 254 2.44392
TMEM254-AS1 TMEM254 antisense RNA 1 2.44392
ANXA11 annexin A11 2.41451
POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa 2.41451
PLAC9 placenta-specific 9 2.41451
LINC00857 long intergenic non-protein coding RNA 857 2.41451
RPS24 ribosomal protein S24 2.41451
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 2.18124
CCL28 chemokine (C-C motif) ligand 28 2.18124
PAIP1 poly(A) binding protein interacting protein 1 2.17694
C5ORF34 chromosome 5 open reading frame 34 2.17694
C5ORF28 chromosome 5 open reading frame 28 2.17694
MRPS30 mitochondrial ribosomal protein S30 2.17694
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 2.16947
FGF10 fibroblast growth factor 10 2.16947
NNT nicotinamide nucleotide transhydrogenase 2.16816
LOC340107 uncharacterized LOC340107 2.16307
IFNE interferon, epsilon 2.15921
IFNA1 interferon, alpha 1 2.15915
IFNA8 interferon, alpha 8 2.15913
IFNA2 interferon, alpha 2 2.1591
IFNA13 interferon, alpha 13 2.15909
IFNA6 interferon, alpha 6 2.15905
KLHL9 kelch-like family member 9 2.15903
IFNA5 interferon, alpha 5 2.15899
IFNA22P interferon, alpha 22, pseudogene 2.15895
IFNA10 interferon, alpha 10 2.15889
IFNA14 interferon, alpha 14 2.15889
IFNA7 interferon, alpha 7 2.15889
IFNA16 interferon, alpha 16 2.15886
IFNA17 interferon, alpha 17 2.15886
IFNA4 interferon, alpha 4 2.1588
IFNA21 interferon, alpha 21 2.15871
IFNW1 interferon, omega 1 2.15839
IFNB1 interferon, beta 1, fibroblast 2.15832
C10ORF105 chromosome 10 open reading frame 105 2.15402
C10ORF54 chromosome 10 open reading frame 54 2.15402
PSAP prosaposin 2.15402
CYLC2 cylicin, basic protein of sperm head cytoskeleton 2 2.15402
CDH23 cadherin-related 23 2.15402
TRPM3 transient receptor potential cation channel, subfamily M, member 3 2.15402
ABHD17B abhydrolase domain containing 17B 2.15316
SLC29A3 solute carrier family 29 (equilibrative nucleoside transporter), member 3 2.15316
C9ORF135 chromosome 9 open reading frame 135 2.15316
PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2.15316
LOC494127 NFYC pseudogene 2.15316
KLF9 Kruppel-like factor 9 2.15316
MAMDC2 MAM domain containing 2 2.15316
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 2.15316
ISCA1 iron-sulfur cluster assembly 1 2.15316
COL15A1 collagen, type XV, alpha 1 2.15316
ZCCHC6 zinc finger, CCHC domain containing 6 2.15316
FXN frataxin 2.15316
PRKACG protein kinase, cAMP-dependent, catalytic, gamma 2.15316
BANCR BRAF-activated non-protein coding RNA 2.15316
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2 2.15316
MIR204 microRNA 204 2.15316
FAM225B family with sequence similarity 225, member B (non-protein coding) 2.15316
ERCC6L2 excision repair cross-complementation group 6-like 2 2.15316
C9ORF85 chromosome 9 open reading frame 85 2.15316
UNC5B unc-5 homolog B (C. elegans) 2.15316
NMRK1 nicotinamide riboside kinase 1 2.15316
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 2.15316
TRAF1 TNF receptor-associated factor 1 2.15316
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 2.15316
TGFBR1 transforming growth factor, beta receptor 1 2.15316
SMC5 structural maintenance of chromosomes 5 2.15316
FANCC Fanconi anemia, complementation group C 2.15316
TMEM2 transmembrane protein 2 2.15316
GALNT12 polypeptide N-acetylgalactosaminyltransferase 12 2.15316
TJP2 tight junction protein 2 2.15316
C9ORF153 chromosome 9 open reading frame 153 2.15316
C9ORF170 chromosome 9 open reading frame 170 2.15316
UNC5B-AS1 UNC5B antisense RNA 1 2.15316
OSTF1 osteoclast stimulating factor 1 2.15316
FAM189A2 family with sequence similarity 189, member A2 2.15316
LINC00092 long intergenic non-protein coding RNA 92 2.15316
LINC00476 long intergenic non-protein coding RNA 476 2.15316
HACD4 3-hydroxyacyl-CoA dehydratase 4 2.15203
MIR491 microRNA 491 2.1433
GOLM1 golgi membrane protein 1 2.14116
LOC158435 uncharacterized LOC158435 2.14116
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 2.14116
SPOCK2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 2.14116
SLC44A1 solute carrier family 44 (choline transporter), member 1 2.14116
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 2.14116
SGPL1 sphingosine-1-phosphate lyase 1 2.14116
DEC1 deleted in esophageal cancer 1 2.14116
CHST3 carbohydrate (chondroitin 6) sulfotransferase 3 2.14116
FKTN fukutin 2.14116
MSANTD3-TMEFF1 MSANTD3-TMEFF1 readthrough 2.14116
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 2.14116
TMEM38B transmembrane protein 38B 2.14116
TAL2 T-cell acute lymphocytic leukemia 2 2.14116
LOC158434 uncharacterized LOC158434 2.14116
FOCAD focadhesin 2.13951
MIR4474 microRNA 4474 2.13708
PDCL phosducin-like 2.1316
RC3H2 ring finger and CCCH-type domains 2 2.1316
SNORD90 small nucleolar RNA, C/D box 90 2.12931
OR1K1 olfactory receptor, family 1, subfamily K, member 1 2.12931
OR5C1 olfactory receptor, family 5, subfamily C, member 1 2.12931
ANAPC16 anaphase promoting complex subunit 16 2.12931
ASCC1 activating signal cointegrator 1 complex subunit 1 2.12931
GPR21 G protein-coupled receptor 21 2.12703
OR1L1 olfactory receptor, family 1, subfamily L, member 1 2.12703
OR1L6 olfactory receptor, family 1, subfamily L, member 6 2.12703
OR1L4 olfactory receptor, family 1, subfamily L, member 4 2.12703
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1 2.12703
OR1L3 olfactory receptor, family 1, subfamily L, member 3 2.12703
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene) 2.12703
CTNNA3 catenin (cadherin-associated protein), alpha 3 2.12703
ZBTB26 zinc finger and BTB domain containing 26 2.12703
FSD1L fibronectin type III and SPRY domain containing 1-like 2.12703
ZBTB6 zinc finger and BTB domain containing 6 2.12703
RABGAP1 RAB GTPase activating protein 1 2.12703
SPATA31D1 SPATA31 subfamily D, member 1 2.12703
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 2.12599
MIR4473 microRNA 4473 2.1258
SNORA30 small nucleolar RNA, H/ACA box 30 2.12529
NRG3 neuregulin 3 2.12225
ASTN2 astrotactin 2 2.12225
ANXA7 annexin A7 2.12225
ANXA2P3 annexin A2 pseudogene 3 2.12225
SNORA11 small nucleolar RNA, H/ACA box 11 2.11499
MIR1256 microRNA 1256 2.11435
VCL vinculin 2.11167
AP3M1 adaptor-related protein complex 3, mu 1 subunit 2.11167
PLAU plasminogen activator, urokinase 2.10992
CFAP70 cilia and flagella associated protein 70 2.10992
CAMK2G calcium/calmodulin-dependent protein kinase II gamma 2.10992
C10ORF55 chromosome 10 open reading frame 55 2.10992
REEP3 receptor accessory protein 3 2.10992
SAXO1 stabilizer of axonemal microtubules 1 2.10992
MIR4509-1 microRNA 4509-1 2.10616
SNORD27 small nucleolar RNA, C/D box 27 2.10607
SLC24A2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 2.10579
SH3GL2 SH3-domain GRB2-like 2 2.10556
ADK adenosine kinase 2.10457
MIR3152 microRNA 3152 2.10177
ADAMTSL1 ADAMTS-like 1 2.10177
ZNF503 zinc finger protein 503 2.10038
ZNF503-AS2 ZNF503 antisense RNA 2 2.10038
C10ORF11 chromosome 10 open reading frame 11 2.10038
ACER2 alkaline ceramidase 2 2.10038
ZNF503-AS1 ZNF503 antisense RNA 1 2.10038
C9ORF92 chromosome 9 open reading frame 92 2.09727
PSIP1 PC4 and SFRS1 interacting protein 1 2.09628
KDM4C lysine (K)-specific demethylase 4C 2.09628
HERC2P3 hect domain and RLD 2 pseudogene 3 2.09534
SFTPA1 surfactant protein A1 2.09529
KAT6B K(lysine) acetyltransferase 6B 2.09529
FAM213A family with sequence similarity 213, member A 2.09431
COMTD1 catechol-O-methyltransferase domain containing 1 2.09431
SH2D4B SH2 domain containing 4B 2.09431
SFTPA2 surfactant protein A2 2.09431
BEND3P3 BEN domain containing 3 pseudogene 3 2.09431
TSPAN14 tetraspanin 14 2.09431
VDAC2 voltage-dependent anion channel 2 2.09431
DUSP13 dual specificity phosphatase 13 2.09431
LOC389705 chromosome 4 open reading frame 27 pseudogene 2.09431
SAMD8 sterile alpha motif domain containing 8 2.09431
CER1 cerberus 1, DAN family BMP antagonist 2.09431
FREM1 FRAS1 related extracellular matrix 1 2.09431
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1 2.09431
GOLGA6L6 golgin A6 family-like 6 2.09363
HERC2P7 hect domain and RLD 2 pseudogene 7 2.09363
GOLGA8CP golgin A8 family, member C, pseudogene 2.09363
BNC2 basonuclin 2 2.09316
DMRT3 doublesex and mab-3 related transcription factor 3 2.09314
CNTLN centlein, centrosomal protein 2.09314
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 2.09294
DMRT2 doublesex and mab-3 related transcription factor 2 2.09294
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2 2.0925
VLDLR very low density lipoprotein receptor 2.0925
KIAA0020 KIAA0020 2.0925
GLIS3-AS1 GLIS3 antisense RNA 1 2.0925
GLIS3 GLIS family zinc finger 3 2.0925
CCDC171 coiled-coil domain containing 171 2.09205
GLDC glycine dehydrogenase (decarboxylating) 2.09117
MAT1A methionine adenosyltransferase I, alpha 2.09073
ZCCHC24 zinc finger, CCHC domain containing 24 2.09073
DYDC1 DPY30 domain containing 1 2.09073
PTPRD protein tyrosine phosphatase, receptor type, D 2.08947
KANK1 KN motif and ankyrin repeat domains 1 2.08887
RFX3 regulatory factor X, 3 (influences HLA class II expression) 2.08882
DMRT1 doublesex and mab-3 related transcription factor 1 2.08877
C9ORF66 chromosome 9 open reading frame 66 2.08877
REREP3 arginine-glutamic acid dipeptide (RE) repeats pseudogene 3 2.08872
NFIB nuclear factor I/B 2.08856
CBWD1 COBW domain containing 1 2.08856
FOXD4 forkhead box D4 2.08839
LINC00583 long intergenic non-protein coding RNA 583 2.08839
ZDHHC21 zinc finger, DHHC-type containing 21 2.08781
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2 2.08781
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 2.08781
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 2.08781
TPD52L3 tumor protein D52-like 3 2.08781
SPATA6L spermatogenesis associated 6-like 2.08781
RCL1 RNA terminal phosphate cyclase-like 1 2.08781
AK3 adenylate kinase 3 2.08781
CDC37L1 cell division cycle 37-like 1 2.08781
IL33 interleukin 33 2.08781
DYDC2 DPY30 domain containing 2 2.08712
DOCK8 dedicator of cytokinesis 8 2.0845
LURAP1L leucine rich adaptor protein 1-like 2.08441
PDCD1LG2 programmed cell death 1 ligand 2 2.08391
CD274 CD274 molecule 2.08391
POTEB POTE ankyrin domain family, member B 2.08279
NBEAP1 neurobeachin pseudogene 1 2.08279
NF1P2 neurofibromin 1 pseudogene 2 2.08279
LOC727924 uncharacterized LOC727924 2.08134
TYRP1 tyrosinase-related protein 1 2.08125
MPDZ multiple PDZ domain protein 2.08116
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene 2.08116
OR4N4 olfactory receptor, family 4, subfamily N, member 4 2.08108
OR4N3P olfactory receptor, family 4, subfamily N, member 3 pseudogene 2.08099
OR4M2 olfactory receptor, family 4, subfamily M, member 2 2.08099
RANBP6 RAN binding protein 6 2.08066
MIR4665 microRNA 4665 2.08066
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein 2.08066
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2 2.08021
KIAA2026 KIAA2026 2.07822
MLANA melan-A 2.07822
ERMP1 endoplasmic reticulum metallopeptidase 1 2.07822
LSP1P3 lymphocyte-specific protein 1 pseudogene 3 2.05072
PRDM9 PR domain containing 9 2.05041
CDH10 cadherin 10, type 2 (T2-cadherin) 2.05014
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene 2.04969
CDH9 cadherin 9, type 2 (T1-cadherin) 2.04969
CDH12 cadherin 12, type 2 (N-cadherin 2) 2.0489
CDH18 cadherin 18, type 2 2.0489
GUSBP1 glucuronidase, beta pseudogene 1 2.0489
IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 2.04842
IGHE immunoglobulin heavy constant epsilon 2.04816
IGHD immunoglobulin heavy constant delta 2.04803
ADAM6 ADAM metallopeptidase domain 6 (pseudogene) 2.04767
KIAA0125 KIAA0125 2.04731
LINC00226 long intergenic non-protein coding RNA 226 2.04712

low copy number

Symbol Name Standardized Value
PCDHA8 protocadherin alpha 8 -3.24687
PCDHA9 protocadherin alpha 9 -3.03082
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -2.99615
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2 -2.73329