MFE-280 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

712 genes with high or low copy number in MFE-280 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
FAM229B family with sequence similarity 229, member B 4.51153
MATN1 matrilin 1, cartilage matrix protein 4.51153
LOC647859 occludin pseudogene 4.51153
CDK7 cyclin-dependent kinase 7 4.51153
IL1RN interleukin 1 receptor antagonist 4.51153
KIAA1919 KIAA1919 4.51153
CBWD2 COBW domain containing 2 4.51153
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 4.51153
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene 4.51153
MIR4420 microRNA 4420 4.51153
TRAF3IP2 TRAF3 interacting protein 2 4.51153
GUSBP9 glucuronidase, beta pseudogene 9 4.51153
CCDC125 coiled-coil domain containing 125 4.51153
SMN2 survival of motor neuron 2, centromeric 4.51153
LAPTM5 lysosomal protein transmembrane 5 4.51153
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) 4.51153
SMN1 survival of motor neuron 1, telomeric 4.51153
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 4.51153
RAD17 RAD17 homolog (S. pombe) 4.51153
LOC441081 POM121 membrane glycoprotein (rat) pseudogene 4.51153
SLC16A10 solute carrier family 16 (aromatic amino acid transporter), member 10 4.51153
SMA5 glucuronidase, beta pseudogene 4.51153
LAMA4 laminin, alpha 4 4.51153
SERF1A small EDRK-rich factor 1A (telomeric) 4.51153
TUBE1 tubulin, epsilon 1 4.51153
OCLN occludin 4.51153
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene) 4.51153
MARVELD2 MARVEL domain containing 2 4.51153
SDC3 syndecan 3 4.51153
TRAF3IP2-AS1 TRAF3IP2 antisense RNA 1 4.51153
WISP3 WNT1 inducible signaling pathway protein 3 4.51153
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 4.51153
GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa 4.51153
MATN1-AS1 MATN1 antisense RNA 1 4.51153
RFPL4B ret finger protein-like 4B 4.51153
FYN FYN proto-oncogene, Src family tyrosine kinase 4.51153
FOXD4L1 forkhead box D4-like 1 4.51153
ARPC3 actin related protein 2/3 complex, subunit 3, 21kDa 3.12177
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae) 3.12177
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle 3.12177
RPS26 ribosomal protein S26 3.12177
RAD54L RAD54-like (S. cerevisiae) 3.12177
RAB5B RAB5B, member RAS oncogene family 3.12177
WIBG within bgcn homolog (Drosophila) 3.12177
RNASEK-C17ORF49 RNASEK-C17orf49 readthrough 3.12177
GPN3 GPN-loop GTPase 3 3.12177
BCL6B B-cell CLL/lymphoma 6, member B 3.12177
SLC9A9-AS1 SLC9A9 antisense RNA 1 3.12177
ERBB3 erb-b2 receptor tyrosine kinase 3 3.12177
TRIM42 tripartite motif containing 42 3.12177
IKZF4 IKAROS family zinc finger 4 (Eos) 3.12177
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 3.12177
HSPBAP1 HSPB (heat shock 27kDa) associated protein 1 3.12177
PA2G4 proliferation-associated 2G4, 38kDa 3.12177
MIR497 microRNA 497 3.12177
DGKA diacylglycerol kinase, alpha 80kDa 3.12177
LOC100506713 3.12177
PUM1 pumilio RNA-binding family member 1 3.12177
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 3.12177
UQCRH ubiquinol-cytochrome c reductase hinge protein 3.12177
DLG4 discs, large homolog 4 (Drosophila) 3.12177
PSD4 pleckstrin and Sec7 domain containing 4 3.12177
CDK2 cyclin-dependent kinase 2 3.12177
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 3.12177
ASGR1 asialoglycoprotein receptor 1 3.12177
LURAP1 leucine rich adaptor protein 1 3.12177
PMEL premelanosome protein 3.12177
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) 3.12177
ALOX12 arachidonate 12-lipoxygenase 3.12177
ESYT1 extended synaptotagmin-like protein 1 3.12177
SNORD85 small nucleolar RNA, C/D box 85 3.12177
ZC3H10 zinc finger CCCH-type containing 10 3.12177
FAM216A family with sequence similarity 216, member A 3.12177
NSUN4 NOP2/Sun domain family, member 4 3.12177
LRRC41 leucine rich repeat containing 41 3.12177
ASGR2 asialoglycoprotein receptor 2 3.12177
DIRC2 disrupted in renal carcinoma 2 3.12177
IFT81 intraflagellar transport 81 3.12177
SUOX sulfite oxidase 3.12177
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 3.12177
RPL41 ribosomal protein L41 3.12177
RAD9B RAD9 homolog B (S. pombe) 3.12177
SNORD103A small nucleolar RNA, C/D box 103A 3.12177
CLSTN2 calsyntenin 2 3.12177
RNF41 ring finger protein 41, E3 ubiquitin protein ligase 3.12177
PAX8 paired box 8 3.12177
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 3.12177
SLC16A11 solute carrier family 16, member 11 3.12177
CLEC10A C-type lectin domain family 10, member A 3.12177
ANAPC7 anaphase promoting complex subunit 7 3.12177
SLC16A13 solute carrier family 16, member 13 3.12177
TSPAN1 tetraspanin 1 3.12177
MIR497HG mir-497-195 cluster host gene 3.12177
XRN1 5'-3' exoribonuclease 1 2.93899
ZNF581 zinc finger protein 581 2.93899
RBP1 retinol binding protein 1, cellular 2.93899
EPN1 epsin 1 2.93899
SSC5D scavenger receptor cysteine rich family, 5 domains 2.93899
ZNF580 zinc finger protein 580 2.93899
FIZ1 FLT3-interacting zinc finger 1 2.93899
ZNF865 zinc finger protein 865 2.93899
RBP2 retinol binding protein 2, cellular 2.93899
SBK2 SH3 domain binding kinase family, member 2 2.93899
QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2.93899
SLC9A9 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 2.93899
ZNF579 zinc finger protein 579 2.93899
ZNF784 zinc finger protein 784 2.93899
NMNAT3 nicotinamide nucleotide adenylyltransferase 3 2.93899
U2AF2 U2 small nuclear RNA auxiliary factor 2 2.93899
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 2.93899
GK5 glycerol kinase 5 (putative) 2.93899
C3ORF58 chromosome 3 open reading frame 58 2.93899
CCDC106 coiled-coil domain containing 106 2.93899
ZNF524 zinc finger protein 524 2.93899
LOC643441 uncharacterized LOC643441 2.76305
RTN4IP1 reticulon 4 interacting protein 1 2.76305
LOC100289361 uncharacterized LOC100289361 2.76305
PAQR9 progestin and adipoQ receptor family member IX 2.76305
ZIC4 Zic family member 4 2.76305
TRPC1 transient receptor potential cation channel, subfamily C, member 1 2.76305
U2SURP U2 snRNP-associated SURP domain containing 2.76305
ZIC1 Zic family member 1 2.76305
GFOD1 glucose-fructose oxidoreductase domain containing 1 2.76305
C6ORF203 chromosome 6 open reading frame 203 2.76305
ATR ATR serine/threonine kinase 2.76305
LBH limb bud and heart development 2.76305
OFCC1 orofacial cleft 1 candidate 1 2.76305
PCOLCE2 procollagen C-endopeptidase enhancer 2 2.76305
LOC100422737 uncharacterized LOC100422737 2.76305
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 2.76305
PLS1 plastin 1 2.76305
RFPL4AL1 ret finger protein-like 4A-like 1 2.76305
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2 2.76305
NLRP4 NLR family, pyrin domain containing 4 2.76305
RFPL4A ret finger protein-like 4A 2.76305
NLRP9 NLR family, pyrin domain containing 9 2.76305
NLRP11 NLR family, pyrin domain containing 11 2.76305
LOC100507389 uncharacterized LOC100507389 2.76305
YPEL5 yippee-like 5 (Drosophila) 2.76305
AIM1 absent in melanoma 1 2.76305
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 2.76305
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 2.64759
FOXL2 forkhead box L2 2.64759
NARR nine-amino acid residue-repeats 2.64759
PLSCR5 phospholipid scramblase family, member 5 2.64759
SNORD42A small nucleolar RNA, C/D box 42A 2.64759
SNORD42B small nucleolar RNA, C/D box 42B 2.64759
LOC284080 uncharacterized LOC284080 2.64759
NEK8 NIMA-related kinase 8 2.64759
TMEM92 transmembrane protein 92 2.64759
HLTF helicase-like transcription factor 2.64759
PPP1R9B protein phosphatase 1, regulatory subunit 9B 2.64759
ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26 2.64759
PDK2 pyruvate dehydrogenase kinase, isozyme 2 2.64759
MRPS22 mitochondrial ribosomal protein S22 2.64759
SNORD4B small nucleolar RNA, C/D box 4B 2.64759
MME membrane metallo-endopeptidase 2.64759
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 2.64759
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 2.64759
TRAF4 TNF receptor-associated factor 4 2.64759
COL1A1 collagen, type I, alpha 1 2.64759
SNORD4A small nucleolar RNA, C/D box 4A 2.64759
LOC149950 uncharacterized LOC149950 2.64759
CD83 CD83 molecule 2.64759
PRR23C proline rich 23C 2.64759
TM4SF18 transmembrane 4 L six family member 18 2.64759
HPS3 Hermansky-Pudlak syndrome 3 2.64759
PISRT1 polled intersex syndrome regulated transcript 1 (non-protein coding RNA) 2.64759
LOC100506207 uncharacterized LOC100506207 2.64759
RANBP9 RAN binding protein 9 2.64759
GYG1 glycogenin 1 2.64759
CP ceruloplasmin (ferroxidase) 2.64759
RPL23A ribosomal protein L23a 2.64759
HLTF-AS1 HLTF antisense RNA 1 2.64759
SAMD14 sterile alpha motif domain containing 14 2.64759
CPA3 carboxypeptidase A3 (mast cell) 2.64759
RAB34 RAB34, member RAS oncogene family 2.64759
TLCD1 TLC domain containing 1 2.64759
HILS1 histone linker H1 domain, spermatid-specific 1, pseudogene 2.64759
DLX4 distal-less homeobox 4 2.64759
PRR23B proline rich 23B 2.64759
HULC hepatocellular carcinoma up-regulated long non-coding RNA 2.64759
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding) 2.64759
RNF182 ring finger protein 182 2.64759
CPB1 carboxypeptidase B1 (tissue) 2.64759
MCUR1 mitochondrial calcium uniporter regulator 1 2.64759
PROCA1 protein interacting with cyclin A1 2.64759
NOL7 nucleolar protein 7, 27kDa 2.64759
FLJ45513 uncharacterized LOC729220 2.64759
PRR23A proline rich 23A 2.64759
SIRT5 sirtuin 5 2.64759
AGTR1 angiotensin II receptor, type 1 2.64759
DLX3 distal-less homeobox 3 2.64759
KIAA0100 KIAA0100 2.64759
LOC100507537 uncharacterized LOC100507537 2.64759
SLC35B3 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 2.64759
TM4SF1 transmembrane 4 L six family member 1 2.64759
C20ORF203 chromosome 20 open reading frame 203 2.64759
MIR4732 microRNA 4732 2.59653
SPAG5 sperm associated antigen 5 2.59653
FLOT2 flotillin 2 2.59653
FOXN1 forkhead box N1 2.59653
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 2.59653
MIR144 microRNA 144 2.59653
SDF2 stromal cell-derived factor 2 2.59653
C3ORF79 chromosome 3 open reading frame 79 2.59653
FGFR2 fibroblast growth factor receptor 2 2.59653
TBC1D7 TBC1 domain family, member 7 2.59653
FAM117A family with sequence similarity 117, member A 2.59653
PLSCR4 phospholipid scramblase 4 2.59653
ALDOC aldolase C, fructose-bisphosphate 2.59653
UNC119 unc-119 homolog (C. elegans) 2.59653
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1 2.59653
SEZ6 seizure related 6 homolog (mouse) 2.59653
SPAG5-AS1 SPAG5 antisense RNA 1 2.59653
ARHGEF26-AS1 ARHGEF26 antisense RNA 1 2.59653
PLSCR1 phospholipid scramblase 1 2.59653
TAC4 tachykinin 4 (hemokinin) 2.59653
FAM222B family with sequence similarity 222, member B 2.59653
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 2.59653
DHRS13 dehydrogenase/reductase (SDR family) member 13 2.59653
MIR451B microRNA 451b 2.59653
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 2.59653
KAT7 K(lysine) acetyltransferase 7 2.59653
GPR149 G protein-coupled receptor 149 2.59653
SGK494 uncharacterized serine/threonine-protein kinase SgK494 2.59653
SLAMF1 signaling lymphocytic activation molecule family member 1 2.59653
DSN1 DSN1, MIS12 kinetochore complex component 2.59653
PLSCR2 phospholipid scramblase 2 2.59653
LOC100130357 uncharacterized LOC100130357 2.59653
MIR451A microRNA 451a 2.59653
PIGS phosphatidylinositol glycan anchor biosynthesis, class S 2.59653
TM4SF4 transmembrane 4 L six family member 4 2.59653
CD84 CD84 molecule 2.49065
SLA2 Src-like-adaptor 2 2.49065
C20ORF24 chromosome 20 open reading frame 24 2.49065
PHF12 PHD finger protein 12 2.49065
NDRG3 NDRG family member 3 2.49065
TGIF2-C20ORF24 TGIF2-C20orf24 readthrough 2.49065
LOC646903 uncharacterized LOC646903 2.49065
ASXL1 additional sex combs like transcriptional regulator 1 2.49065
TGIF2 TGFB-induced factor homeobox 2 2.49065
PLCH1 phospholipase C, eta 1 2.49065
KRTDAP keratinocyte differentiation-associated protein 2.49065
SLAMF6 SLAM family member 6 2.49065
WWTR1 WW domain containing transcription regulator 1 2.49065
TLDC2 TBC/LysM-associated domain containing 2 2.49065
MYL9 myosin, light chain 9, regulatory 2.49065
MISO1 mitochondrial inner membrane subdomain organizer 1 2.49065
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 2.49065
MROH8 maestro heat-like repeat family member 8 2.49065
SAMHD1 SAM domain and HD domain 1 2.49065
WWTR1-AS1 WWTR1 antisense RNA 1 2.49065
RBL1 retinoblastoma-like 1 2.49065
RAP2B RAP2B, member of RAS oncogene family 2.49065
RNF13 ring finger protein 13 2.49065
COMMD2 COMM domain containing 2 2.49065
PFN2 profilin 2 2.49065
SOGA1 suppressor of glucose, autophagy associated 1 2.49065
KIF3B kinesin family member 3B 2.49065
LOC100506469 2.44392
FAM187B family with sequence similarity 187, member B 2.44392
GHRH growth hormone releasing hormone 2.44392
PLAGL2 pleiomorphic adenoma gene-like 2 2.44392
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 2.44392
POFUT1 protein O-fucosyltransferase 1 2.44392
FFAR2 free fatty acid receptor 2 2.44392
LOC100128682 2.44392
TMEM254-AS1 TMEM254 antisense RNA 1 2.44392
HOXB2 homeobox B2 2.44392
HOXB1 homeobox B1 2.44392
LGI4 leucine-rich repeat LGI family, member 4 2.44392
USF2 upstream transcription factor 2, c-fos interacting 2.44392
SFTPD surfactant protein D 2.44392
FXYD1 FXYD domain containing ion transport regulator 1 2.44392
FXYD3 FXYD domain containing ion transport regulator 3 2.44392
FXYD5 FXYD domain containing ion transport regulator 5 2.44392
SERP1 stress-associated endoplasmic reticulum protein 1 2.44392
TMEM147 transmembrane protein 147 2.44392
TSC22D2 TSC22 domain family, member 2 2.44392
EIF2A eukaryotic translation initiation factor 2A, 65kDa 2.44392
FXYD7 FXYD domain containing ion transport regulator 7 2.44392
CD22 CD22 molecule 2.44392
P2RY1 purinergic receptor P2Y, G-protein coupled, 1 2.44392
P2RY13 purinergic receptor P2Y, G-protein coupled, 13 2.44392
HAMP hepcidin antimicrobial peptide 2.44392
MIR5196 microRNA 5196 2.44392
P2RY12 purinergic receptor P2Y, G-protein coupled, 12 2.44392
RPN2 ribophorin II 2.44392
TM9SF4 transmembrane 9 superfamily protein member 4 2.44392
SCN1B sodium channel, voltage gated, type I beta subunit 2.44392
IGSF10 immunoglobulin superfamily, member 10 2.44392
SKAP1 src kinase associated phosphoprotein 1 2.44392
MIR5186 microRNA 5186 2.44392
LSR lipolysis stimulated lipoprotein receptor 2.44392
FFAR1 free fatty acid receptor 1 2.44392
MANBAL mannosidase, beta A, lysosomal-like 2.44392
MBL1P mannose-binding lectin (protein A) 1, pseudogene 2.44392
TSPY26P testis specific protein, Y-linked 26, pseudogene 2.44392
HCK HCK proto-oncogene, Src family tyrosine kinase 2.44392
SIAH2 siah E3 ubiquitin protein ligase 2 2.44392
GPR87 G protein-coupled receptor 87 2.44392
SBSN suprabasin 2.44392
DMKN dermokine 2.44392
GMPS guanine monphosphate synthase 2.44392
HPN hepsin 2.44392
KCNAB1-AS2 KCNAB1 antisense RNA 2 2.44392
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 2.44392
CLRN1 clarin 1 2.44392
HOXB-AS1 HOXB cluster antisense RNA 1 2.44392
LOC100288974 2.44392
TMEM254 transmembrane protein 254 2.44392
CLRN1-AS1 CLRN1 antisense RNA 1 2.44392
SELT selenoprotein T 2.44392
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 2.44392
GPR171 G protein-coupled receptor 171 2.44392
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 2.44392
GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic 2.44392
MAG myelin associated glycoprotein 2.44392
GRAMD1A GRAM domain containing 1A 2.44392
MED12L mediator complex subunit 12-like 2.44392
HPN-AS1 HPN antisense RNA 1 2.44392
P2RY14 purinergic receptor P2Y, G-protein coupled, 14 2.44392
GFM1 G elongation factor, mitochondrial 1 2.41451
C19ORF40 chromosome 19 open reading frame 40 2.41451
PLAC9 placenta-specific 9 2.41451
KCNAB1-AS1 KCNAB1 antisense RNA 1 2.41451
TIPARP-AS1 TIPARP antisense RNA 1 2.41451
LINC00857 long intergenic non-protein coding RNA 857 2.41451
MIR3919 microRNA 3919 2.41451
AAR2 AAR2 splicing factor homolog (S. cerevisiae) 2.41451
TMEM14E transmembrane protein 14E 2.41451
SLC7A10 solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10 2.41451
RHPN2 rhophilin, Rho GTPase binding protein 2 2.41451
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 2.41451
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 2.41451
GPI glucose-6-phosphate isomerase 2.41451
KIAA0355 KIAA0355 2.41451
TRA2B transformer 2 beta homolog (Drosophila) 2.41451
ZNF792 zinc finger protein 792 2.41451
LRP3 low density lipoprotein receptor-related protein 3 2.41451
KCNAB1 potassium channel, voltage gated subfamily A regulatory beta subunit 1 2.41451
LOC344887 NmrA-like family domain containing 1 pseudogene 2.41451
LXN latexin 2.41451
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 2.41451
ETV5 ets variant 5 2.41451
WDR88 WD repeat domain 88 2.41451
LINC00886 long intergenic non-protein coding RNA 886 2.41451
EPB41L1 erythrocyte membrane protein band 4.1-like 1 2.41451
PDCD2L programmed cell death 2-like 2.41451
AADACL2 arylacetamide deacetylase-like 2 2.41451
ANXA11 annexin A11 2.41451
SRC SRC proto-oncogene, non-receptor tyrosine kinase 2.41451
LOC101243545 uncharacterized LOC101243545 2.41451
MLF1 myeloid leukemia factor 1 2.41451
PA2G4P4 proliferation-associated 2G4 pseudogene 4 2.41451
GPATCH1 G patch domain containing 1 2.41451
SPTSSB serine palmitoyltransferase, small subunit B 2.41451
LINC00657 long intergenic non-protein coding RNA 657 2.41451
LIPH lipase, member H 2.39327
SCGB1B2P secretoglobin, family 1B, member 2, pseudogene 2.39327
UBA2 ubiquitin-like modifier activating enzyme 2 2.39327
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2.39327
LINC00880 long intergenic non-protein coding RNA 880 2.39327
LINC00881 long intergenic non-protein coding RNA 881 2.39327
SCGB2B2 secretoglobin, family 2B, member 2 2.39327
MIR15B microRNA 15b 2.39327
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2 2.39327
CHST8 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 2.39327
KCTD15 potassium channel tetramerization domain containing 15 2.39327
SCHIP1 schwannomin interacting protein 1 2.39327
ZNF302 zinc finger protein 302 2.39327
MBNL1-AS1 MBNL1 antisense RNA 1 2.39327
PTX3 pentraxin 3, long 2.39327
SCAND1 SCAN domain containing 1 2.39327
CEP89 centrosomal protein 89kDa 2.39327
ZNF181 zinc finger protein 181 2.39327
RSRC1 arginine/serine-rich coiled-coil 1 2.39327
WTIP Wilms tumor 1 interacting protein 2.39327
ZNF599 zinc finger protein 599 2.39327
CCNL1 cyclin L1 2.39327
LINC00904 long intergenic non-protein coding RNA 904 2.39327
PHF20 PHD finger protein 20 2.39327
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 2.39327
ZNF30 zinc finger protein 30 2.39327
MIR16-2 microRNA 16-2 2.39327
TMEM41A transmembrane protein 41A 2.39327
IL12A interleukin 12A 2.39327
CNBD2 cyclic nucleotide binding domain containing 2 2.39327
SCGB2B3P secretoglobin, family 2B, member 3, pseudogene 2.39327
NMD3 NMD3 ribosome export adaptor 2.39327
IFT80 intraflagellar transport 80 2.39327
SPTBN4 spectrin, beta, non-erythrocytic 4 2.39327
SHOX2 short stature homeobox 2 2.39327
C3ORF80 chromosome 3 open reading frame 80 2.39327
IGF2BP2-AS1 IGF2BP2 antisense RNA 1 2.39327
MBNL1 muscleblind-like splicing regulator 1 2.39327
SUCNR1 succinate receptor 1 2.39327
LEKR1 leucine, glutamate and lysine rich 1 2.39327
TRIM59 tripartite motif containing 59 2.39327
SMC4 structural maintenance of chromosomes 4 2.39327
OTOL1 otolin 1 2.39327
LOC400685 uncharacterized LOC400685 2.39327
LOC100505835 2.36889
NNAT neuronatin 2.36889
MSL1 male-specific lethal 1 homolog (Drosophila) 2.36889
PQLC2L PQ loop repeat containing 2-like 2.36889
PEPD peptidase D 2.36889
RGS9BP regulator of G protein signaling 9 binding protein 2.36889
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase 2.36889
SCARNA7 small Cajal body-specific RNA 7 2.36889
BLCAP bladder cancer associated protein 2.36889
ARL14 ADP-ribosylation factor-like 14 2.36889
LRRC37A11P leucine rich repeat containing 37, member A11, pseudogene 2.36889
ANKRD27 ankyrin repeat domain 27 (VPS9 domain) 2.36889
PDCD5 programmed cell death 5 2.36889
LINC00906 long intergenic non-protein coding RNA 906 2.36889
VEPH1 ventricular zone expressed PH domain-containing 1 2.36889
ZNF507 zinc finger protein 507 2.36889
KPNA4 karyopherin alpha 4 (importin alpha 3) 2.36889
BLVRB biliverdin reductase B 2.36889
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha 2.36889
TDRD12 tudor domain containing 12 2.36889
LOC400684 uncharacterized LOC400684 2.36889
MAP3K13 mitogen-activated protein kinase kinase kinase 13 2.36889
FBXO47 F-box protein 47 2.36889
CEBPA-AS1 CEBPA antisense RNA 1 (head to head) 2.36889
DPY19L3 dpy-19-like 3 (C. elegans) 2.36889
SLC7A9 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 2.36889
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 2.36889
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma 2.36889
EHHADH-AS1 EHHADH antisense RNA 1 2.36889
NUDT19 nudix (nucleoside diphosphate linked moiety X)-type motif 19 2.35236
HIPK4 homeodomain interacting protein kinase 4 2.35236
MIR641 microRNA 641 2.35236
C19ORF47 chromosome 19 open reading frame 47 2.35236
C3ORF70 chromosome 3 open reading frame 70 2.35236
LOC100131347 RAD52 motif containing 1 pseudogene 2.35236
CASC3 cancer susceptibility candidate 3 2.35236
SERTAD1 SERTA domain containing 1 2.35236
SERTAD3 SERTA domain containing 3 2.35236
PLD3 phospholipase D family, member 3 2.35236
PRX periaxin 2.35236
OPA1-AS1 OPA1 antisense RNA 1 2.3178
ARL5C ADP-ribosylation factor-like 5C 2.3178
OPA1 optic atrophy 1 (autosomal dominant) 2.3178
MAP3K10 mitogen-activated protein kinase kinase kinase 10 2.3178
CNTD2 cyclin N-terminal domain containing 2 2.3178
AKT2 v-akt murine thymoma viral oncogene homolog 2 2.3178
TTC9B tetratricopeptide repeat domain 9B 2.3178
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 2.3178
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 2.3178
NCEH1 neutral cholesterol ester hydrolase 1 2.3178
NR1D1 nuclear receptor subfamily 1, group D, member 1 2.3178
THEG5 testis highly expressed protein 5 2.30944
ATP13A5 ATPase type 13A5 2.30944
ATP13A4 ATPase type 13A4 2.30944
MGC2889 uncharacterized protein MGC2889 2.30944
MCCC1 methylcrotonoyl-CoA carboxylase 1 (alpha) 2.30944
ECT2 epithelial cell transforming 2 2.30944
HRASLS HRAS-like suppressor 2.30944
ZNF780B zinc finger protein 780B 2.30944
ZNF780A zinc finger protein 780A 2.30944
PLXDC1 plexin domain containing 1 2.30944
GHSR growth hormone secretagogue receptor 2.30944
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 2.30944
EID2 EP300 interacting inhibitor of differentiation 2 2.283
RPL19 ribosomal protein L19 2.283
ATP11B ATPase, class VI, type 11B 2.283
RPL22L1 ribosomal protein L22-like 1 2.283
RPS16 ribosomal protein S16 2.283
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 2.283
STAC2 SH3 and cysteine rich domain 2 2.283
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 2.283
MED29 mediator complex subunit 29 2.283
MIR4530 microRNA 4530 2.283
CACNB1 calcium channel, voltage-dependent, beta 1 subunit 2.283
SELV selenoprotein V 2.283
TSHZ3 teashirt zinc finger homeobox 3 2.283
SPATA16 spermatogenesis associated 16 2.283
LGALS13 lectin, galactoside-binding, soluble, 13 2.283
LEUTX leucine twenty homeobox 2.283
ZFP36 ZFP36 ring finger protein 2.283
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 2.283
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 2.283
EID2B EP300 interacting inhibitor of differentiation 2B 2.283
EIF5A2 eukaryotic translation initiation factor 5A2 2.283
ZNF546 zinc finger protein 546 2.283
DLL3 delta-like 3 (Drosophila) 2.283
SAMD4B sterile alpha motif domain containing 4B 2.283
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 2.283
FCGBP Fc fragment of IgG binding protein 2.283
DYRK1B dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 2.283
FBL fibrillarin 2.283
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 2.283
CLDN11 claudin 11 2.26395
NLGN1 neuroligin 1 2.26395
CLC Charcot-Leyden crystal galectin 2.26395
ACTL6A actin-like 6A 2.26395
THRA thyroid hormone receptor, alpha 2.26395
SLC7A14 solute carrier family 7, member 14 2.26395
LGALS16 lectin, galactoside-binding, soluble, 16 2.26395
NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 2.26395
LGALS17A Charcot-Leyden crystal protein pseudogene 2.26395
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 2.26395
ZNF536 zinc finger protein 536 2.26395
MRPL47 mitochondrial ribosomal protein L47 2.26395
LGALS14 lectin, galactoside-binding, soluble, 14 2.26395
LOC100129935 lectin, galactoside-binding, soluble, 14 pseudogene 2.26395
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1 2.25904
SKIL SKI-like proto-oncogene 2.25904
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 2.25904
LOC100128164 four and a half LIM domains 1 pseudogene 2.25904
POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) 2.25904
PEX5L peroxisomal biogenesis factor 5-like 2.25904
TUFT1 tuftelin 1 2.25904
ZNF639 zinc finger protein 639 2.25904
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 2.25904
GPR160 G protein-coupled receptor 160 2.25904
MFN1 mitofusin 1 2.25904
PRKCI protein kinase C, iota 2.25904
TNIK TRAF2 and NCK interacting kinase 2.25904
CGN cingulin 2.25904
SEC62 SEC62 homolog (S. cerevisiae) 2.25904
MIR569 microRNA 569 2.25904
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 2.25904
MIR554 microRNA 554 2.25904
CSF3 colony stimulating factor 3 (granulocyte) 2.24845
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 2.24845
FBXL20 F-box and leucine-rich repeat protein 20 2.24845
CCDC39 coiled-coil domain containing 39 2.24845
FLJ46066 uncharacterized LOC401103 2.24845
C19ORF12 chromosome 19 open reading frame 12 2.24845
FXR1 fragile X mental retardation, autosomal homolog 1 2.24845
MED24 mediator complex subunit 24 2.24845
PHC3 polyhomeotic homolog 3 (Drosophila) 2.24845
DNAJC19 DnaJ (Hsp40) homolog, subfamily C, member 19 2.24845
SAMD7 sterile alpha motif domain containing 7 2.24845
LINC00578 long intergenic non-protein coding RNA 578 2.24845
ZMAT3 zinc finger, matrin-type 3 2.24845
RFX5 regulatory factor X, 5 (influences HLA class II expression) 2.24845
MED1 mediator complex subunit 1 2.24845
TTC14 tetratricopeptide repeat domain 14 2.24845
SELENBP1 selenium binding protein 1 2.24845
SNORD124 small nucleolar RNA, C/D box 124 2.24845
TMOD4 tropomodulin 4 (muscle) 2.24139
PI4KB phosphatidylinositol 4-kinase, catalytic, beta 2.24139
KCNMB2 potassium channel subfamily M regulatory beta subunit 2 2.24139
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 2.24139
LRRIQ4 leucine-rich repeats and IQ motif containing 4 2.24139
LRRC31 leucine rich repeat containing 31 2.24139
LRRC34 leucine rich repeat containing 34 2.24139
VSTM2B V-set and transmembrane domain containing 2B 2.24139
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 2.24139
POGZ pogo transposable element with ZNF domain 2.24139
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 2.24139
ZNF687 zinc finger protein 687 2.24139
LOC284395 uncharacterized LOC284395 2.24139
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4 2.24139
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 2.24139
TERC telomerase RNA component 2.2355
ACTRT3 actin-related protein T3 2.2355
MYNN myoneurin 2.2355
URI1 URI1, prefoldin-like chaperone 2.2355
CCNE1 cyclin E1 2.2355
CBLN4 cerebellin 4 precursor 2.23324
GSDMA gasdermin A 2.23324
LRRC3C leucine rich repeat containing 3C 2.23324
ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 2.23078
GSDMB gasdermin B 2.22793
DOK5 docking protein 5 2.22633
CDK12 cyclin-dependent kinase 12 2.22558
PFDN4 prefoldin subunit 4 2.22291
ZPBP2 zona pellucida binding protein 2 2.22291
NEUROD2 neuronal differentiation 2 2.22123
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 2.21258
STARD3 StAR-related lipid transfer (START) domain containing 3 2.21096
PNMT phenylethanolamine N-methyltransferase 2.20309
TCAP titin-cap 2.20309
GRB7 growth factor receptor-bound protein 7 2.20053
PGAP3 post-GPI attachment to proteins 3 2.20053
MIEN1 migration and invasion enhancer 1 2.20053
ERBB2 erb-b2 receptor tyrosine kinase 2 2.20053
MIR4728 microRNA 4728 2.20053
IKZF3 IKAROS family zinc finger 3 (Aiolos) 2.19863
LINC00861 long intergenic non-protein coding RNA 861 2.15967
GTF2H2C GTF2H2 family member C 2.15402
LOC100272216 uncharacterized LOC100272216 2.15402
GUSBP3 glucuronidase, beta pseudogene 3 2.15402
THBS2 thrombospondin 2 2.15316
NAIP NLR family, apoptosis inhibitory protein 2.15316
SMA4 glucuronidase, beta pseudogene 2.15316
JAK1 Janus kinase 1 2.14116
MIR3671 microRNA 3671 2.14116
MIR101-1 microRNA 101-1 2.14116
FAM151A family with sequence similarity 151, member A 2.12703
ACOT11 acyl-CoA thioesterase 11 2.12703
TTC4 tetratricopeptide repeat domain 4 2.12703
MROH7 maestro heat-like repeat family member 7 2.12703
TREH trehalase (brush-border membrane glycoprotein) 2.12225
TTC22 tetratricopeptide repeat domain 22 2.12225
IFT46 intraflagellar transport 46 2.12225
ARCN1 archain 1 2.12225
PARS2 prolyl-tRNA synthetase 2, mitochondrial (putative) 2.12225
KMT2A lysine (K)-specific methyltransferase 2A 2.12225
PHLDB1 pleckstrin homology-like domain, family B, member 1 2.12225
C1ORF177 chromosome 1 open reading frame 177 2.12225
DHCR24 24-dehydrocholesterol reductase 2.12225
TTC36 tetratricopeptide repeat domain 36 2.12225
TMEM25 transmembrane protein 25 2.12225
FFAR3 free fatty acid receptor 3 2.12053
CUX1 cut-like homeobox 1 2.11167
ADK adenosine kinase 2.10457
JARID2 jumonji, AT rich interactive domain 2 2.10177
DTNBP1 dystrobrevin binding protein 1 2.10038
PYDC2 pyrin domain containing 2 2.09529
CCDC50 coiled-coil domain containing 50 2.09529
KAT6B K(lysine) acetyltransferase 6B 2.09529
TSPAN14 tetraspanin 14 2.09431
DUSP13 dual specificity phosphatase 13 2.09431
COMTD1 catechol-O-methyltransferase domain containing 1 2.09431
SH2D4B SH2 domain containing 4B 2.09431
FAM213A family with sequence similarity 213, member A 2.09431
VDAC2 voltage-dependent anion channel 2 2.09431
PHACTR1 phosphatase and actin regulator 1 2.09431
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1 2.09431
SAMD8 sterile alpha motif domain containing 8 2.09431
EPN2-AS1 EPN2 antisense RNA 1 2.09161
ALDH3A1 aldehyde dehydrogenase 3 family, member A1 2.09161
EPN2-IT1 EPN2 intronic transcript 1 2.09117
SLC47A2 solute carrier family 47 (multidrug and toxin extrusion), member 2 2.09117
UTS2B urotensin 2B 2.09117
IQCJ IQ motif containing J 2.09073
MAT1A methionine adenosyltransferase I, alpha 2.09073
MFSD1 major facilitator superfamily domain containing 1 2.09073
DYDC1 DPY30 domain containing 1 2.09073
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 2.08839
ULK2 unc-51 like autophagy activating kinase 2 2.08822
AKAP10 A kinase (PRKA) anchor protein 10 2.08806
EPN2 epsin 2 2.08806
RNF112 ring finger protein 112 2.08781
B9D1 B9 protein domain 1 2.08781
MIR1180 microRNA 1180 2.08781
MFAP4 microfibrillar-associated protein 4 2.08781
MAPK7 mitogen-activated protein kinase 7 2.08781
OSTN osteocrin 2.08781
FCGR1C Fc fragment of IgG, high affinity Ic, receptor (CD64), pseudogene 2.08781
DYDC2 DPY30 domain containing 2 2.08712
SNORA59A small nucleolar RNA, H/ACA box 59A 2.08712
SLC47A1 solute carrier family 47 (multidrug and toxin extrusion), member 1 2.08712
GMNC geminin coiled-coil domain containing 2.08391
SNAR-I small ILF3/NF90-associated RNA I 2.08391
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 2.08391
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 2.08334
SST somatostatin 2.08334
LOC100131635 hCG1645011-like 2.08334
MIR548H2 microRNA 548h-2 2.08334
BCL6 B-cell CLL/lymphoma 6 2.08334
RTP2 receptor (chemosensory) transporter protein 2 2.08334
AADAC arylacetamide deacetylase 2.08334
MIR944 microRNA 944 2.08066
CLDN16 claudin 16 2.08066
TPRG1-AS2 TPRG1 antisense RNA 2 2.08066
CLDN1 claudin 1 2.08066
TMEM207 transmembrane protein 207 2.08066
IL1RAP interleukin 1 receptor accessory protein 2.08066
P3H2 prolyl 3-hydroxylase 2 2.08066
PPIAL4F peptidylprolyl isomerase A (cyclophilin A)-like 4F 2.08021
LOC388692 uncharacterized LOC388692 2.07855
LOC645166 lymphocyte-specific protein 1 pseudogene 2.07822
TP63 tumor protein p63 2.07822
TPRG1 tumor protein p63 regulated 1 2.07558
LPP-AS2 LPP antisense RNA 2 2.07558
FLJ42393 uncharacterized LOC401105 2.07558
MB21D2 Mab-21 domain containing 2 2.0752
LPP LIM domain containing preferred translocation partner in lipoma 2.07346
TMEM212 transmembrane protein 212 2.0731
PLD1 phospholipase D1, phosphatidylcholine-specific 2.0731
FNDC3B fibronectin type III domain containing 3B 2.0731
FGF12 fibroblast growth factor 12 2.0731
NAALADL2-AS3 NAALADL2 antisense RNA 3 2.0703
MIR4789 microRNA 4789 2.06989
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 2.06592
SI sucrase-isomaltase (alpha-glucosidase) 2.06505
BCHE butyrylcholinesterase 2.06473
SERPINI2 serpin peptidase inhibitor, clade I (pancpin), member 2 2.06473
SLITRK3 SLIT and NTRK-like family, member 3 2.06473
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 2.06341
ZBBX zinc finger, B-box domain containing 2.06316
SOX2 SRY (sex determining region Y)-box 2 2.06316
GOLIM4 golgi integral membrane protein 4 2.06316
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 2.06316
PDCD10 programmed cell death 10 2.06316
WDR49 WD repeat domain 49 2.06316
SOX2-OT SOX2 overlapping transcript 2.06316
MIR551B microRNA 551b 2.0622
EGFEM1P EGF-like and EMI domain containing 1, pseudogene 2.06105
MECOM MDS1 and EVI1 complex locus 2.06061
POU5F1B POU class 5 homeobox 1B 2.05836

low copy number

Symbol Name Standardized Value
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 -3.83684
TUSC7 tumor suppressor candidate 7 (non-protein coding) -3.48261
ZNF860 zinc finger protein 860 -3.24687
OSBPL10 oxysterol binding protein-like 10 -3.24687
TNRC18 trinucleotide repeat containing 18 -3.17182
RERE arginine-glutamic acid dipeptide (RE) repeats -3.03592
LINC00441 long intergenic non-protein coding RNA 441 -2.91268
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 -2.87269
LPAR6 lysophosphatidic acid receptor 6 -2.85279
OR52N5 olfactory receptor, family 52, subfamily N, member 5 -2.84224
RB1 retinoblastoma 1 -2.83092
DMD dystrophin -2.78077
OR52N1 olfactory receptor, family 52, subfamily N, member 1 -2.73524