MIA-PaCa-2 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Pancreatic Carcinoma Tumour (Cell Model Passports, SIDM00505)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00505
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Genes

195 proteins associated with the cell line MIA-PaCa-2 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABHD6 abhydrolase domain containing 6
AFG3L2 AFG3-like AAA ATPase 2
AHCTF1 AT hook containing transcription factor 1
AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1
ATAD3B ATPase family, AAA domain containing 3B
CCDC71L coiled-coil domain containing 71-like
CDK18 cyclin-dependent kinase 18
CTNNBIP1 catenin, beta interacting protein 1
CYB5B cytochrome b5 type B (outer mitochondrial membrane)
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2
EFTUD2 elongation factor Tu GTP binding domain containing 2
ENDOG endonuclease G
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
EXOSC1 exosome component 1
EXOSC10 exosome component 10
EXOSC2 exosome component 2
EXOSC5 exosome component 5
EXOSC6 exosome component 6
FBL fibrillarin
FNIP2 folliculin interacting protein 2
GNL2 guanine nucleotide binding protein-like 2 (nucleolar)
GNL3 guanine nucleotide binding protein-like 3 (nucleolar)
GPATCH4 G patch domain containing 4
HCCS holocytochrome c synthase
LAS1L LAS1-like (S. cerevisiae)
LINC00176 long intergenic non-protein coding RNA 176
LOC105373961 uncharacterized LOC105373961
LYAR Ly1 antibody reactive
MED13 mediator complex subunit 13
MKI67 marker of proliferation Ki-67
MLF2 myeloid leukemia factor 2
MMP27 matrix metallopeptidase 27
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
MPHOSPH6 M-phase phosphoprotein 6
MRPL19 mitochondrial ribosomal protein L19
MRPL44 mitochondrial ribosomal protein L44
MRPL9 mitochondrial ribosomal protein L9
MTO1 mitochondrial tRNA translation optimization 1
MYBBP1A MYB binding protein (P160) 1a
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
NGDN neuroguidin, EIF4E binding protein
NIP7 NIP7, nucleolar pre-rRNA processing protein
NOL7 nucleolar protein 7, 27kDa
NOM1 nucleolar protein with MIF4G domain 1
NOP16 NOP16 nucleolar protein
NOP2 NOP2 nucleolar protein
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NUCLEOLIN nucleolin multifunctional protein
OXA1L oxidase (cytochrome c) assembly 1-like
PELP1 proline, glutamate and leucine rich protein 1
PES1 pescadillo ribosomal biogenesis factor 1
PHB prohibitin
PHB2 prohibitin 2
PODXL podocalyxin-like
PPAN peter pan homolog (Drosophila)
PRPF4 pre-mRNA processing factor 4
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
PTBP1 polypyrimidine tract binding protein 1
PUM3 pumilio RNA binding family member 3
PWP1 PWP1 homolog (S. cerevisiae)
RAB27B RAB27B, member RAS oncogene family
RAP2B RAP2B, member of RAS oncogene family
RBM25 RNA binding motif protein 25
RBM28 RNA binding motif protein 28
RBM34 RNA binding motif protein 34
RRP1 ribosomal RNA processing 1
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae)
RRP1B ribosomal RNA processing 1B
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
SLC38A2 solute carrier family 38, member 2
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SURF6 surfeit 6
TFB2M transcription factor B2, mitochondrial
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast)
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast)
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy
TOP1 topoisomerase (DNA) I
TRIP12 thyroid hormone receptor interactor 12
USP47 ubiquitin specific peptidase 47
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
WDR12 WD repeat domain 12
WDR18 WD repeat domain 18
WDR36 WD repeat domain 36
WDR43 WD repeat domain 43
WDR46 WD repeat domain 46
YME1L1 YME1-like 1 ATPase

Symbol Name
A2M alpha-2-macroglobulin
ACTA2 actin, alpha 2, smooth muscle, aorta
AGA aspartylglucosaminidase
ANKH ANKH inorganic pyrophosphate transport regulator
ARFGAP2 ADP-ribosylation factor GTPase activating protein 2
ARFIP2 ADP-ribosylation factor interacting protein 2
ARHGAP29 Rho GTPase activating protein 29
ARIH2 ariadne RBR E3 ubiquitin protein ligase 2
ARL14EP ADP-ribosylation factor-like 14 effector protein
ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
AVL9 AVL9 homolog (S. cerevisiase)
BCR breakpoint cluster region
C15ORF48 chromosome 15 open reading frame 48
CAB39L calcium binding protein 39-like
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2
CDK6 cyclin-dependent kinase 6
CHMP2B charged multivesicular body protein 2B
CHMP4B charged multivesicular body protein 4B
CLDN12 claudin 12
CLN5 ceroid-lipofuscinosis, neuronal 5
COMMD2 COMM domain containing 2
CPNE1 copine I
DCP1A decapping mRNA 1A
DCTN5 dynactin 5 (p25)
DNAH5 dynein, axonemal, heavy chain 5
DUSP12 dual specificity phosphatase 12
ELP5 elongator acetyltransferase complex subunit 5
ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1
ERAP1 endoplasmic reticulum aminopeptidase 1
EXOC3 exocyst complex component 3
FAM91A1 family with sequence similarity 91, member A1
FERMT2 fermitin family member 2
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
GORASP2 golgi reassembly stacking protein 2, 55kDa
GRB7 growth factor receptor-bound protein 7
HDIP1 HDAC and MIER1 interacting protein 1
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
ISG15 ISG15 ubiquitin-like modifier
KMT2B lysine (K)-specific methyltransferase 2B
LDHB lactate dehydrogenase B
LGALSL lectin, galactoside-binding-like
LGMN legumain
LOC105378759 uncharacterized LOC105378759
LRRC34 leucine rich repeat containing 34
MANF mesencephalic astrocyte-derived neurotrophic factor
MARCKS myristoylated alanine-rich protein kinase C substrate
MISP mitotic spindle positioning
NCOR2 nuclear receptor corepressor 2
NDFIP1 Nedd4 family interacting protein 1
NELFCD negative elongation factor complex member C/D
NFYB nuclear transcription factor Y, beta
NNT nicotinamide nucleotide transhydrogenase
OXLD1 oxidoreductase-like domain containing 1
PFDN4 prefoldin subunit 4
PGM2 phosphoglucomutase 2
PHACTR4 phosphatase and actin regulator 4
PITPNA phosphatidylinositol transfer protein, alpha
POMT2 protein-O-mannosyltransferase 2
PPP2R1B protein phosphatase 2, regulatory subunit A, beta
PRR36 proline rich 36
RAB7B RAB7B, member RAS oncogene family
RABEP2 rabaptin, RAB GTPase binding effector protein 2
RAD18 RAD18 E3 ubiquitin protein ligase
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic)
RUSC1 RUN and SH3 domain containing 1
SCLY selenocysteine lyase
SETD3 SET domain containing 3
SFXN3 sideroflexin 3
SLC7A3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SNX22 sorting nexin 22
SNX30 sorting nexin family member 30
SPTBN2 spectrin, beta, non-erythrocytic 2
SS18 synovial sarcoma translocation, chromosome 18
STK36 serine/threonine kinase 36
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TBC1D5 TBC1 domain family, member 5
TCEAL4 transcription elongation factor A (SII)-like 4
TLE3 transducin-like enhancer of split 3
TMOD3 tropomodulin 3 (ubiquitous)
TPM3 tropomyosin 3
TRIO trio Rho guanine nucleotide exchange factor
TRIOBP TRIO and F-actin binding protein
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TRMT61B tRNA methyltransferase 61B
UBE2B ubiquitin-conjugating enzyme E2B
UBE2D3 ubiquitin-conjugating enzyme E2D 3
USP1 ubiquitin specific peptidase 1
USP48 ubiquitin specific peptidase 48
VPS51 vacuolar protein sorting 51 homolog (S. cerevisiae)
ZBTB40 zinc finger and BTB domain containing 40
ZCCHC3 zinc finger, CCHC domain containing 3
ZFYVE1 zinc finger, FYVE domain containing 1