MK-3903_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-3903 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-3903_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.14197
RRM2 ribonucleotide reductase M2 0.046251
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0445384
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0400421
RAB7A RAB7A, member RAS oncogene family 0.0394143
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0329929
ZNF638 zinc finger protein 638 0.0320976
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0319791
FTL ferritin, light polypeptide 0.0318514
ERRFI1 ERBB receptor feedback inhibitor 1 0.0313813
INTS6 integrator complex subunit 6 0.0300149
ATP11A ATPase, class VI, type 11A 0.0298257
MBD5 methyl-CpG binding domain protein 5 0.0296213
PCDH7 protocadherin 7 0.0295028
HSPA8 heat shock 70kDa protein 8 0.0290643
VMP1 vacuole membrane protein 1 0.0280091
PUM2 pumilio RNA-binding family member 2 0.0279217
BIRC3 baculoviral IAP repeat containing 3 0.0267887
ZCCHC7 zinc finger, CCHC domain containing 7 0.0262273
WNK1 WNK lysine deficient protein kinase 1 0.0261378
EPHA6 EPH receptor A6 0.0261314
APLP2 amyloid beta (A4) precursor-like protein 2 0.0256271
ZSWIM6 zinc finger, SWIM-type containing 6 0.025332
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0245796
HSPH1 heat shock 105kDa/110kDa protein 1 0.024346
USP9X ubiquitin specific peptidase 9, X-linked 0.0243391
HDAC9 histone deacetylase 9 0.0243293
RPL3 ribosomal protein L3 0.0240241
RCC1 regulator of chromosome condensation 1 0.0239659
BRD2 bromodomain containing 2 0.0238542
ARRDC3 arrestin domain containing 3 0.023591
DENND5A DENN/MADD domain containing 5A 0.0234271
DSCAM Down syndrome cell adhesion molecule 0.02291
SETD5 SET domain containing 5 0.022815
WWOX WW domain containing oxidoreductase 0.0227199
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0226326
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0225279
LRRC23 leucine rich repeat containing 23 0.0223958
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0215217
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0211615
RPS23 ribosomal protein S23 0.0206139
GPHN gephyrin 0.0205784
PCDH9 protocadherin 9 0.020187
CPOX coproporphyrinogen oxidase 0.0198558
TCP1 t-complex 1 0.019528
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0193517
EXOC6B exocyst complex component 6B 0.0191316
LOC102724023 ES1 protein homolog, mitochondrial 0.0188172
CAMKMT calmodulin-lysine N-methyltransferase 0.0187641
KMT2C lysine (K)-specific methyltransferase 2C 0.0187621
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0187596
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0186556
LGALS12 lectin, galactoside-binding, soluble, 12 0.0186393
SQSTM1 sequestosome 1 0.0184777
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0183303
EPHA5 EPH receptor A5 0.0182654
TTC17 tetratricopeptide repeat domain 17 0.018097
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0180908
PTK2 protein tyrosine kinase 2 0.0180609
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0179512
GOLGB1 golgin B1 0.0178928
LRP6 low density lipoprotein receptor-related protein 6 0.0176693
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0175747
RLF rearranged L-myc fusion 0.0175124
ADIPOR2 adiponectin receptor 2 0.0174753
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0173808
FMNL2 formin-like 2 0.0169408
FBXL17 F-box and leucine-rich repeat protein 17 0.0169374
FTH1 ferritin, heavy polypeptide 1 0.0168523
ELOVL5 ELOVL fatty acid elongase 5 0.0168051
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 0.0167908
KMT2E lysine (K)-specific methyltransferase 2E 0.016474
AKAP9 A kinase (PRKA) anchor protein 9 0.0164305
RPL4 ribosomal protein L4 0.0162482
PRH1 proline-rich protein HaeIII subfamily 1 0.0162113
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0161926
ASPH aspartate beta-hydroxylase 0.0161651
CCNL1 cyclin L1 0.016163
TRAPPC8 trafficking protein particle complex 8 0.0161552
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.0160433
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0158974
BCLAF1 BCL2-associated transcription factor 1 0.0158775
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0158304
RPS12 ribosomal protein S12 0.015794
ZEB1 zinc finger E-box binding homeobox 1 0.0154741
ITCH itchy E3 ubiquitin protein ligase 0.0152768
H1-5 H1.5 linker histone, cluster member 0.0152608
HSPA4 heat shock 70kDa protein 4 0.0151682
TFG TRK-fused gene 0.0150675
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0150161
HMGA2 high mobility group AT-hook 2 0.0149189
KDM2A lysine (K)-specific demethylase 2A 0.0149107
USP47 ubiquitin specific peptidase 47 0.0148705
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0148361
STXBP4 syntaxin binding protein 4 0.0147922
YTHDC1 YTH domain containing 1 0.014749
ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 0.0147321
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.0146926
TAS2R14 taste receptor, type 2, member 14 0.0146898
PNISR PNN-interacting serine/arginine-rich protein 0.0143753

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.35362
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.11934
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.111228
PDE4D phosphodiesterase 4D, cAMP-specific -0.109782
MYL12B myosin, light chain 12B, regulatory -0.105475
ACTG1 actin gamma 1 -0.0877079
TMSB10 thymosin beta 10 -0.0858968
ANKRD12 ankyrin repeat domain 12 -0.0850917
NLGN1 neuroligin 1 -0.0798875
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0634721
TMEM123 transmembrane protein 123 -0.0621347
DST dystonin -0.06198
YBX3 Y box binding protein 3 -0.0612804
IFIH1 interferon induced with helicase C domain 1 -0.0592667
ANXA1 annexin A1 -0.0579702
RASAL2 RAS protein activator like 2 -0.0579432
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0554239
AHNAK AHNAK nucleoprotein -0.0536342
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.053334
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0516259
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0514466
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0513553
MAP1B microtubule-associated protein 1B -0.049334
ANKRD28 ankyrin repeat domain 28 -0.049022
KPNB1 karyopherin (importin) beta 1 -0.047691
KLF6 Kruppel-like factor 6 -0.047224
TPI1 triosephosphate isomerase 1 -0.047124
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0469201
NAP1L1 nucleosome assembly protein 1-like 1 -0.0466847
RERE arginine-glutamic acid dipeptide (RE) repeats -0.046671
DLC1 DLC1 Rho GTPase activating protein -0.0462524
CELF2 CUGBP, Elav-like family member 2 -0.0459291
HMGA1 high mobility group AT-hook 1 -0.0457538
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0451567
GARS1 glycyl-tRNA synthetase 1 -0.044446
CLDN1 claudin 1 -0.0440108
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0438722
RPS6 ribosomal protein S6 -0.0433862
ZNF804A zinc finger protein 804A -0.0429231
SLC38A2 solute carrier family 38, member 2 -0.0427552
MMP12 matrix metallopeptidase 12 -0.0414155
EHBP1 EH domain binding protein 1 -0.0409342
BCHE butyrylcholinesterase -0.0385749
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0383335
CBX3 chromobox homolog 3 -0.0383283
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0382857
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0377281
PFN1 profilin 1 -0.0374795
ENO1 enolase 1, (alpha) -0.0371015
GNAS GNAS complex locus -0.0364398
RPS21 ribosomal protein S21 -0.036378
JMJD1C jumonji domain containing 1C -0.0356563
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0355851
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0355614
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0354409
TPT1 tumor protein, translationally-controlled 1 -0.0348213
CMIP c-Maf inducing protein -0.0348161
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0343799
PDGFC platelet derived growth factor C -0.034309
TUBA1B tubulin, alpha 1b -0.0339735
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0338485
CENPF centromere protein F, 350/400kDa -0.0337633
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0335995
LARP1 La ribonucleoprotein domain family, member 1 -0.0333569
RPLP0 ribosomal protein, large, P0 -0.0332119
XPO1 exportin 1 -0.0329421
FBXO11 F-box protein 11 -0.0315349
RPS24 ribosomal protein S24 -0.0313926
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0308294
CAVIN1 caveolae associated protein 1 -0.0306444
NCEH1 neutral cholesterol ester hydrolase 1 -0.0305549
CANX calnexin -0.0299702
PTMA prothymosin, alpha -0.029852
ZNF217 zinc finger protein 217 -0.029601
DTNA dystrobrevin, alpha -0.0294394
S100A6 S100 calcium binding protein A6 -0.0293939
TM4SF1 transmembrane 4 L six family member 1 -0.0293885
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0290122
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0287899
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0286966
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0284732
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0282499
GCG glucagon -0.0280395
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.027231
VCL vinculin -0.0271595
S100A10 S100 calcium binding protein A10 -0.0268107
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 -0.0267252
LDHA lactate dehydrogenase A -0.026591
CUX1 cut-like homeobox 1 -0.0265659
XPOT exportin, tRNA -0.0264872
LOC112694756 uncharaterized LOC112694756 -0.0261978
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0254978
RPL26 ribosomal protein L26 -0.0253847
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0253608
KHSRP KH-type splicing regulatory protein -0.0253051
RPL11 ribosomal protein L11 -0.0252366
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0251911
RPL23 ribosomal protein L23 -0.0251146
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0245789
RACK1 receptor for activated C kinase 1 -0.0242476