MK-3903_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-3903 perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-3903_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.166834
FTL ferritin, light polypeptide 0.118389
VIM vimentin 0.105081
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.100877
ZSWIM6 zinc finger, SWIM-type containing 6 0.100557
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0979098
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.093314
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0845967
TMSB10 thymosin beta 10 0.0802487
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0705693
FTH1 ferritin, heavy polypeptide 1 0.0689639
FRMD4A FERM domain containing 4A 0.0652509
SOD2 superoxide dismutase 2, mitochondrial 0.061524
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0601727
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0576816
EEF2 eukaryotic translation elongation factor 2 0.0565184
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0551195
CXCL8 chemokine (C-X-C motif) ligand 8 0.0519297
CREB5 cAMP responsive element binding protein 5 0.051735
CRY1 cryptochrome circadian clock 1 0.05006
RND3 Rho family GTPase 3 0.0499538
GOLGB1 golgin B1 0.0487852
RPL23 ribosomal protein L23 0.0470665
UBA6 ubiquitin-like modifier activating enzyme 6 0.0466004
EGFR epidermal growth factor receptor 0.0462839
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0459981
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0459942
EXT1 exostosin glycosyltransferase 1 0.0445556
SP100 SP100 nuclear antigen 0.0444924
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.04407
MLF1 myeloid leukemia factor 1 0.0437324
ELL2 elongation factor, RNA polymerase II, 2 0.0433226
RPS19 ribosomal protein S19 0.0431193
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0423016
COG5 component of oligomeric golgi complex 5 0.0419416
ATF3 activating transcription factor 3 0.040786
GPC6 glypican 6 0.0407419
EFNA5 ephrin-A5 0.0402529
RPS4X ribosomal protein S4, X-linked 0.0402457
ALCAM activated leukocyte cell adhesion molecule 0.0401644
CANX calnexin 0.0397237
EIF1 eukaryotic translation initiation factor 1 0.0391233
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0389136
GPC5 glypican 5 0.0373131
KIRREL3 kin of IRRE like 3 (Drosophila) 0.0366116
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0363876
TRIO trio Rho guanine nucleotide exchange factor 0.0363756
HDAC9 histone deacetylase 9 0.0362816
IFRD1 interferon-related developmental regulator 1 0.0359484
SUCO SUN domain containing ossification factor 0.0358561
ANXA2 annexin A2 0.0357514
INTS6 integrator complex subunit 6 0.0354283
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0347772
SEC24D SEC24 family member D 0.0347169
RPL35A ribosomal protein L35a 0.0346354
CTBP2 C-terminal binding protein 2 0.0342888
RAB2A RAB2A, member RAS oncogene family 0.0334501
ATF6 activating transcription factor 6 0.0331931
CADM1 cell adhesion molecule 1 0.0324523
RPS8 ribosomal protein S8 0.0321666
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.0320505
HLA-A major histocompatibility complex, class I, A 0.0319081
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0317937
RPL34 ribosomal protein L34 0.0317734
RAB7A RAB7A, member RAS oncogene family 0.0316025
NDEL1 nudE neurodevelopment protein 1-like 1 0.0314092
MT2A metallothionein 2A 0.0310251
FMNL2 formin-like 2 0.0310211
VMP1 vacuole membrane protein 1 0.0306146
IFITM3 interferon induced transmembrane protein 3 0.0305454
ZCCHC7 zinc finger, CCHC domain containing 7 0.0303077
ESYT2 extended synaptotagmin-like protein 2 0.0300425
MYADM myeloid-associated differentiation marker 0.0300363
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0295568
IARS1 isoleucyl-tRNA synthetase 1 0.0295377
MCL1 myeloid cell leukemia 1 0.0292368
SEC24A SEC24 family member A 0.0291461
SIK3 SIK family kinase 3 0.0288447
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0288447
EGR1 early growth response 1 0.0287048
RPL12 ribosomal protein L12 0.0286114
SAMD4A sterile alpha motif domain containing 4A 0.0283197
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 0.0281822
SEC31A SEC31 homolog A (S. cerevisiae) 0.0281797
HBP1 HMG-box transcription factor 1 0.0274393
RLF rearranged L-myc fusion 0.0272928
HLA-B major histocompatibility complex, class I, B 0.0271366
CALR calreticulin 0.0271028
KPNB1 karyopherin (importin) beta 1 0.0270335
RAB1A RAB1A, member RAS oncogene family 0.0269988
B2M beta-2-microglobulin 0.0269663
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0268056
RPL35 ribosomal protein L35 0.026777
ADNP activity-dependent neuroprotector homeobox 0.0267649
RPLP1 ribosomal protein, large, P1 0.0267542
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0266016
FNIP1 folliculin interacting protein 1 0.0264135
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0263801
MSR1 macrophage scavenger receptor 1 0.0262863
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0259534

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.15481
POTEF POTE ankyrin domain family, member F -0.091113
ASPH aspartate beta-hydroxylase -0.0749687
NRP2 neuropilin 2 -0.0669099
RPS2 ribosomal protein S2 -0.0667094
NRIP1 nuclear receptor interacting protein 1 -0.0642691
SMAD3 SMAD family member 3 -0.0606467
TOP2A topoisomerase (DNA) II alpha 170kDa -0.056639
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0512989
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0500498
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0486219
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0479221
GLS2 glutaminase 2 (liver, mitochondrial) -0.0471274
CENPF centromere protein F, 350/400kDa -0.047031
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0469051
CCL2 chemokine (C-C motif) ligand 2 -0.0463707
RAI14 retinoic acid induced 14 -0.0459087
UGCG UDP-glucose ceramide glucosyltransferase -0.044179
XPO1 exportin 1 -0.0424629
MYH9 myosin, heavy chain 9, non-muscle -0.0419746
ANLN anillin, actin binding protein -0.0410719
TNS3 tensin 3 -0.0408634
PTBP3 polypyrimidine tract binding protein 3 -0.0404655
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0397963
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0388462
SP3 Sp3 transcription factor -0.0379768
TSHZ2 teashirt zinc finger homeobox 2 -0.036839
AGFG1 ArfGAP with FG repeats 1 -0.0368034
GNA12 guanine nucleotide binding protein (G protein) alpha 12 -0.036604
LOXL2 lysyl oxidase-like 2 -0.0361437
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0360981
CP ceruloplasmin (ferroxidase) -0.0340134
RBM39 RNA binding motif protein 39 -0.0338572
RTN4 reticulon 4 -0.033492
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0334599
GCC2 GRIP and coiled-coil domain containing 2 -0.0325765
MSN moesin -0.0323078
PBX1 pre-B-cell leukemia homeobox 1 -0.0322687
HPCAL1 hippocalcin-like 1 -0.0321257
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0319768
DDIT4 DNA-damage-inducible transcript 4 -0.0316786
UBQLN1 ubiquilin 1 -0.0314959
NRP1 neuropilin 1 -0.030281
VCAN versican -0.0299851
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0298916
MKI67 marker of proliferation Ki-67 -0.0296714
GLIS3 GLIS family zinc finger 3 -0.0296391
APOL1 apolipoprotein L, 1 -0.029507
SET SET nuclear proto-oncogene -0.0287465
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0284147
EML4 echinoderm microtubule associated protein like 4 -0.0283239
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0280394
QKI QKI, KH domain containing, RNA binding -0.0279427
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0277137
TPM1 tropomyosin 1 (alpha) -0.0276986
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0273619
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0273354
RNF216 ring finger protein 216 -0.0269672
COL4A2 collagen, type IV, alpha 2 -0.026916
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0267667
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -0.026709
SLTM SAFB-like, transcription modulator -0.026669
TGFB2 transforming growth factor, beta 2 -0.0266138
DAPK1 death-associated protein kinase 1 -0.0265853
STK17A serine/threonine kinase 17a -0.0265023
WDR43 WD repeat domain 43 -0.0263444
ECPAS Ecm29 proteasome adaptor and scaffold -0.0261109
CNBP CCHC-type zinc finger, nucleic acid binding protein -0.0259338
LITAF lipopolysaccharide-induced TNF factor -0.0250299
FAM20C family with sequence similarity 20, member C -0.0250005
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) -0.0249878
TGFBI transforming growth factor, beta-induced, 68kDa -0.0249613
CAPRIN1 cell cycle associated protein 1 -0.0249122
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.024873
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0246777
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0244937
P3H2 prolyl 3-hydroxylase 2 -0.0243865
CREB3L2 cAMP responsive element binding protein 3-like 2 -0.024329
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae) -0.0242696
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0240505
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0239564
TPX2 TPX2, microtubule-associated -0.0239446
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0239282
RRBP1 ribosome binding protein 1 -0.0239104
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0237211
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 -0.0236909
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0236341
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0235804
RRM2 ribonucleotide reductase M2 -0.0235246
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0235048
ANKRD10 ankyrin repeat domain 10 -0.0234938
ACTN4 actinin, alpha 4 -0.0233482
AOPEP aminopeptidase O (putative) -0.0231603
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 -0.0230702
ITGAV integrin, alpha V -0.0230064
SLFN5 schlafen family member 5 -0.0229869
RAD21 RAD21 homolog (S. pombe) -0.0229186
PTGR1 prostaglandin reductase 1 -0.0228709
MRTFA myocardin related transcription factor A -0.0228161
ADAM10 ADAM metallopeptidase domain 10 -0.022747