MK-3903_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-3903 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-3903_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.224812
ZSWIM6 zinc finger, SWIM-type containing 6 0.159738
VMP1 vacuole membrane protein 1 0.107763
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0985517
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0972636
TLE4 transducin-like enhancer of split 4 0.0933042
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.090263
EXT1 exostosin glycosyltransferase 1 0.0844066
PTPRD protein tyrosine phosphatase, receptor type, D 0.0789733
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0647251
FNDC3A fibronectin type III domain containing 3A 0.0621054
LINGO2 leucine rich repeat and Ig domain containing 2 0.0613296
MCL1 myeloid cell leukemia 1 0.0571107
EGR1 early growth response 1 0.056729
TIMP3 TIMP metallopeptidase inhibitor 3 0.0560078
INTS6 integrator complex subunit 6 0.0549717
VIM vimentin 0.0515207
LSAMP limbic system-associated membrane protein 0.0513976
SLIT2 slit homolog 2 (Drosophila) 0.0497134
FMN1 formin 1 0.0494191
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0465671
PRKCA protein kinase C, alpha 0.0459917
TAS2R14 taste receptor, type 2, member 14 0.0453972
PDE10A phosphodiesterase 10A 0.0442648
CANX calnexin 0.043909
RPL4 ribosomal protein L4 0.043071
RAD51B RAD51 paralog B 0.042801
HOMER1 homer scaffolding protein 1 0.0414738
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0414467
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0412613
RAB7A RAB7A, member RAS oncogene family 0.0406199
RIGI RNA sensor RIG-I 0.0405949
MYO1E myosin IE 0.0403564
RPL19 ribosomal protein L19 0.0399047
ASPH aspartate beta-hydroxylase 0.0396834
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0394911
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0385808
FLT1 fms-related tyrosine kinase 1 0.0374481
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0373717
LOC102724023 ES1 protein homolog, mitochondrial 0.0370852
IGFBP3 insulin-like growth factor binding protein 3 0.0364072
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0363196
ACTG1 actin gamma 1 0.0360938
EIF1 eukaryotic translation initiation factor 1 0.0360785
DST dystonin 0.0355282
RPS23 ribosomal protein S23 0.0350548
STK38L serine/threonine kinase 38 like 0.0338413
GLCCI1 glucocorticoid induced 1 0.0338025
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0336498
PGK1 phosphoglycerate kinase 1 0.0332158
AEBP2 AE binding protein 2 0.0323993
SVIL supervillin 0.0320357
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0318829
MBNL1 muscleblind-like splicing regulator 1 0.0314541
LIMA1 LIM domain and actin binding 1 0.0314358
DNM3 dynamin 3 0.0311021
HDX highly divergent homeobox 0.0309749
FERMT2 fermitin family member 2 0.0308672
B2M beta-2-microglobulin 0.0307821
NFE2L2 nuclear factor, erythroid 2-like 2 0.0306811
HSPH1 heat shock 105kDa/110kDa protein 1 0.0306608
ZCCHC7 zinc finger, CCHC domain containing 7 0.0304073
RPS27 ribosomal protein S27 0.0300797
BPTF bromodomain PHD finger transcription factor 0.0300267
APLP2 amyloid beta (A4) precursor-like protein 2 0.0290895
PDLIM5 PDZ and LIM domain 5 0.029007
ATXN1 ataxin 1 0.0284221
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0282929
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0281328
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0280614
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0279849
FAM107B family with sequence similarity 107, member B 0.027913
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0275142
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0274763
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 0.0274342
ACTN1 actinin, alpha 1 0.0273942
CXXC5 CXXC finger protein 5 0.0271812
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.0267695
SMAD3 SMAD family member 3 0.0267586
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0266792
STC1 stanniocalcin 1 0.0266493
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0266484
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0265261
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.026501
PACS1 phosphofurin acidic cluster sorting protein 1 0.0259787
BCAS3 breast carcinoma amplified sequence 3 0.0259491
CENPF centromere protein F, 350/400kDa 0.0259061
TIMP2 TIMP metallopeptidase inhibitor 2 0.0256889
GPBP1 GC-rich promoter binding protein 1 0.0256445
RPL13A ribosomal protein L13a 0.025518
DIAPH2 diaphanous-related formin 2 0.0254268
TPT1 tumor protein, translationally-controlled 1 0.025414
ANGPTL4 angiopoietin-like 4 0.0251967
SRRM2 serine/arginine repetitive matrix 2 0.0248844
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0248803
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0248096
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0246558
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0244262
NACA nascent polypeptide-associated complex alpha subunit 0.0242664
PTPRE protein tyrosine phosphatase, receptor type, E 0.0241407

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.222433
IGF2 insulin-like growth factor 2 -0.132422
NRG1 neuregulin 1 -0.121269
LPIN1 lipin 1 -0.0997599
SYT1 synaptotagmin I -0.0700995
COL1A1 collagen, type I, alpha 1 -0.0685642
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0616543
NPEPPS aminopeptidase puromycin sensitive -0.0575223
SOS1 son of sevenless homolog 1 (Drosophila) -0.0523306
NEK7 NIMA-related kinase 7 -0.0506456
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0506397
HIP1 huntingtin interacting protein 1 -0.0473448
ZMYM2 zinc finger, MYM-type 2 -0.0462976
MSI2 musashi RNA-binding protein 2 -0.0459729
FOXK2 forkhead box K2 -0.0449955
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0436941
CEP95 centrosomal protein 95kDa -0.0435708
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0430655
TPST1 tyrosylprotein sulfotransferase 1 -0.0391034
RBM25 RNA binding motif protein 25 -0.0385755
HELZ helicase with zinc finger -0.0381627
AOPEP aminopeptidase O (putative) -0.0379955
RPS2 ribosomal protein S2 -0.0369934
KMT2E lysine (K)-specific methyltransferase 2E -0.0367048
NCAM2 neural cell adhesion molecule 2 -0.0364472
MAP1B microtubule-associated protein 1B -0.0363862
ADGRG6 adhesion G protein-coupled receptor G6 -0.0362501
COL3A1 collagen, type III, alpha 1 -0.0358378
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0351633
H3-3B H3.3 histone B -0.0349646
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0346539
FKBP1A FK506 binding protein 1A, 12kDa -0.034622
NAMPT nicotinamide phosphoribosyltransferase -0.0344541
FKBP10 FK506 binding protein 10, 65 kDa -0.0343468
KMT2C lysine (K)-specific methyltransferase 2C -0.0337955
ARHGAP5 Rho GTPase activating protein 5 -0.0337244
MBTD1 mbt domain containing 1 -0.0336526
OGA O-GlcNAcase -0.0332533
KPNB1 karyopherin (importin) beta 1 -0.0322862
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0322605
HMGB2 high mobility group box 2 -0.031566
PLAT plasminogen activator, tissue -0.0314389
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.0310836
GRB2 growth factor receptor-bound protein 2 -0.0307867
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0307735
TENT5A terminal nucleotidyltransferase 5A -0.0307439
CCNY cyclin Y -0.0306723
CRH corticotropin releasing hormone -0.030583
ELF2 E74-like factor 2 (ets domain transcription factor) -0.029961
PHIP pleckstrin homology domain interacting protein -0.029693
XPO1 exportin 1 -0.0296113
WSB1 WD repeat and SOCS box containing 1 -0.0292857
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0291881
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0291243
NKTR natural killer cell triggering receptor -0.0290654
PHF3 PHD finger protein 3 -0.0289621
CDC27 cell division cycle 27 -0.0285857
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.028257
PCM1 pericentriolar material 1 -0.0279183
ZNF207 zinc finger protein 207 -0.0278517
RPL38 ribosomal protein L38 -0.0273402
NCOR1 nuclear receptor corepressor 1 -0.027254
FOXO3 forkhead box O3 -0.0272135
UBA2 ubiquitin-like modifier activating enzyme 2 -0.0271564
TRIB2 tribbles pseudokinase 2 -0.0264397
LMAN1 lectin, mannose-binding, 1 -0.0263042
SLITRK6 SLIT and NTRK-like family, member 6 -0.026159
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0260288
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0259137
CASC3 cancer susceptibility candidate 3 -0.0257637
HAND2 heart and neural crest derivatives expressed 2 -0.0256359
QKI QKI, KH domain containing, RNA binding -0.0255601
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0254962
PSD3 pleckstrin and Sec7 domain containing 3 -0.0250545
AUTS2 autism susceptibility candidate 2 -0.0246995
WDR45B WD repeat domain 45B -0.0246665
PRTG protogenin -0.0246064
TLK2 tousled-like kinase 2 -0.0246032
ANKRD28 ankyrin repeat domain 28 -0.0245955
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0245351
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0244241
DLC1 DLC1 Rho GTPase activating protein -0.024364
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0243038
DSCAM Down syndrome cell adhesion molecule -0.0240667
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0240245
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0239824
FCHSD2 FCH and double SH3 domains 2 -0.0239671
CCND1 cyclin D1 -0.0239122
PIAS1 protein inhibitor of activated STAT, 1 -0.0238938
IGF1R insulin-like growth factor 1 receptor -0.0234982
GNAS GNAS complex locus -0.0234848
KDM6A lysine (K)-specific demethylase 6A -0.0232653
PLPP1 phospholipid phosphatase 1 -0.0231224
NBR1 neighbor of BRCA1 gene 1 -0.0228368
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 -0.0228274
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0227716
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0227687
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0223836
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.0223739
MYH10 myosin, heavy chain 10, non-muscle -0.0221881