MK-3903_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-3903 perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-3903_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.454076
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.126757
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.117152
ERRFI1 ERBB receptor feedback inhibitor 1 0.0861024
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0761949
TPM3 tropomyosin 3 0.0738713
AFF3 AF4/FMR2 family, member 3 0.0705164
GOLGB1 golgin B1 0.0662145
YBX3 Y box binding protein 3 0.0643258
MCL1 myeloid cell leukemia 1 0.0637732
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0636641
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0611629
RAB7A RAB7A, member RAS oncogene family 0.0610841
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0606383
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0558538
DST dystonin 0.0555094
THSD4 thrombospondin, type I, domain containing 4 0.0553019
MACF1 microtubule-actin crosslinking factor 1 0.0544244
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0536302
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0534471
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0517032
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0512142
INTS6 integrator complex subunit 6 0.0505768
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.049055
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0481801
FNDC3B fibronectin type III domain containing 3B 0.0467841
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0465963
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.045711
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0456833
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0439251
HSPA8 heat shock 70kDa protein 8 0.0428271
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0425775
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0410598
ZSWIM6 zinc finger, SWIM-type containing 6 0.0403323
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0402336
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0393258
DOCK5 dedicator of cytokinesis 5 0.0381658
CANX calnexin 0.0371754
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0363162
ZCCHC7 zinc finger, CCHC domain containing 7 0.0361786
AEBP2 AE binding protein 2 0.0357899
PDE4D phosphodiesterase 4D, cAMP-specific 0.0353895
PDLIM5 PDZ and LIM domain 5 0.0350871
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0348963
VMP1 vacuole membrane protein 1 0.0348402
ATXN1 ataxin 1 0.0348307
PRH1 proline-rich protein HaeIII subfamily 1 0.0346096
RABGAP1L RAB GTPase activating protein 1-like 0.0341334
DSPP dentin sialophosphoprotein 0.033974
EXOC4 exocyst complex component 4 0.0338191
GPHN gephyrin 0.0332372
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0321512
MYH9 myosin, heavy chain 9, non-muscle 0.0318462
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 0.0317452
PTK2 protein tyrosine kinase 2 0.0317039
ATF6 activating transcription factor 6 0.0314803
PRELID2 PRELI domain containing 2 0.0310805
MBD5 methyl-CpG binding domain protein 5 0.0310721
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0308789
GRAMD1B GRAM domain containing 1B 0.0308583
WNT2B wingless-type MMTV integration site family, member 2B 0.0300006
VCP valosin containing protein 0.0299219
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0297285
WWOX WW domain containing oxidoreductase 0.0296482
TAS2R14 taste receptor, type 2, member 14 0.029298
ANO6 anoctamin 6 0.0291539
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0288609
HOMER1 homer scaffolding protein 1 0.0287917
TRIP12 thyroid hormone receptor interactor 12 0.0286116
TRA2A transformer 2 alpha homolog (Drosophila) 0.0280921
MCTP1 multiple C2 domains, transmembrane 1 0.0280404
FMNL2 formin-like 2 0.0273897
COPA coatomer protein complex, subunit alpha 0.0272084
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0269997
HDLBP high density lipoprotein binding protein 0.026888
ASPH aspartate beta-hydroxylase 0.0266767
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0266302
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0265715
LOC102724023 ES1 protein homolog, mitochondrial 0.0263723
GPATCH2L G patch domain containing 2-like 0.0260129
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0259944
PRKCE protein kinase C, epsilon 0.0255949
RIMS2 regulating synaptic membrane exocytosis 2 0.0254815
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0254212
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0254146
APLP2 amyloid beta (A4) precursor-like protein 2 0.0252838
SIK3 SIK family kinase 3 0.0252182
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0250462
SVIL supervillin 0.0249542
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0249322
AHNAK AHNAK nucleoprotein 0.0249272
SAMD4A sterile alpha motif domain containing 4A 0.024673
HSPH1 heat shock 105kDa/110kDa protein 1 0.0244397
CNOT4 CCR4-NOT transcription complex, subunit 4 0.0242726
TLN1 talin 1 0.0242228
PATJ PATJ crumbs cell polarity complex component 0.0240577
NF1 neurofibromin 1 0.0238019
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0236791
PDE10A phosphodiesterase 10A 0.0235865
YBX1 Y box binding protein 1 0.0234968

decreased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0871323
TXNRD1 thioredoxin reductase 1 -0.0588476
TFPI2 tissue factor pathway inhibitor 2 -0.0545815
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0510296
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.049294
EGR1 early growth response 1 -0.0485659
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0472625
WSB1 WD repeat and SOCS box containing 1 -0.0437635
RTN4 reticulon 4 -0.0405756
RUSC2 RUN and SH3 domain containing 2 -0.0376441
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.036455
PHIP pleckstrin homology domain interacting protein -0.0363967
PFN1 profilin 1 -0.0359899
ZMYM2 zinc finger, MYM-type 2 -0.0347001
LATS2 large tumor suppressor kinase 2 -0.0345665
CCNL1 cyclin L1 -0.0337674
TMEM165 transmembrane protein 165 -0.0337557
NCAPD2 non-SMC condensin I complex, subunit D2 -0.03243
MIS18BP1 MIS18 binding protein 1 -0.0314907
POTEF POTE ankyrin domain family, member F -0.031155
GATAD2B GATA zinc finger domain containing 2B -0.0294948
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.028168
MYL12B myosin, light chain 12B, regulatory -0.0281519
XPO1 exportin 1 -0.0280177
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0277883
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0273455
RPLP0 ribosomal protein, large, P0 -0.0272428
RPL35A ribosomal protein L35a -0.025489
SMC4 structural maintenance of chromosomes 4 -0.0242657
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0241593
VDAC1 voltage-dependent anion channel 1 -0.0241226
UBE2H ubiquitin-conjugating enzyme E2H -0.0236679
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0231409
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0230407
HMGA1 high mobility group AT-hook 1 -0.0230141
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0226929
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0222337
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0221813
RNF38 ring finger protein 38 -0.0221585
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0214417
RNF145 ring finger protein 145 -0.0213848
RB1CC1 RB1-inducible coiled-coil 1 -0.0203731
BBX bobby sox homolog (Drosophila) -0.019586
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha -0.0195537
GPSM2 G-protein signaling modulator 2 -0.0194696
ADAM9 ADAM metallopeptidase domain 9 -0.0194169
NPEPPS aminopeptidase puromycin sensitive -0.0193903
PRR11 proline rich 11 -0.0193422
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0190722
SEPTIN7 septin 7 -0.0190197
ATXN2 ataxin 2 -0.0188557
TNPO3 transportin 3 -0.0186877
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0185909
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0184509
PCNX1 pecanex 1 -0.018436
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0183964
FBXO34 F-box protein 34 -0.0183714
CDK19 cyclin-dependent kinase 19 -0.0182015
ZMYND8 zinc finger, MYND-type containing 8 -0.0180173
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0179573
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 -0.0177439
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0176954
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0176656
PCBP2 poly(rC) binding protein 2 -0.0176531
ZFR zinc finger RNA binding protein -0.0175753
FHL2 four and a half LIM domains 2 -0.0175665
MARCHF6 membrane associated ring-CH-type finger 6 -0.0175546
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0174564
SINHCAF SIN3-HDAC complex associated factor -0.0172517
BUB1 BUB1 mitotic checkpoint serine/threonine kinase -0.0172472
NEK7 NIMA-related kinase 7 -0.017204
WASF2 WAS protein family, member 2 -0.0171633
MT1X metallothionein 1X -0.0171303
ANKRD36B ankyrin repeat domain 36B -0.0171301
RPL23 ribosomal protein L23 -0.0169806
TMPO thymopoietin -0.0169357
ANKRD28 ankyrin repeat domain 28 -0.0168925
BRD8 bromodomain containing 8 -0.016822
SGO2 shugoshin 2 -0.0167635
STIL SCL/TAL1 interrupting locus -0.0167208
ZNF292 zinc finger protein 292 -0.0166949
PNISR PNN-interacting serine/arginine-rich protein -0.0166395
CDC27 cell division cycle 27 -0.0165543
ATP5F1B ATP synthase F1 subunit beta -0.0164841
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0164752
KMT2D lysine (K)-specific methyltransferase 2D -0.0164734
OGA O-GlcNAcase -0.0164358
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0163899
NEMF nuclear export mediator factor -0.0163395
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.016004
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.015944
KIF18B kinesin family member 18B -0.0159249
LDHB lactate dehydrogenase B -0.0158635
ADAM17 ADAM metallopeptidase domain 17 -0.015831
POGZ pogo transposable element with ZNF domain -0.0157731
IGF2 insulin-like growth factor 2 -0.0157513
KIF2C kinesin family member 2C -0.0156944
SRPK2 SRSF protein kinase 2 -0.0156372
KMT2E lysine (K)-specific methyltransferase 2E -0.0156072
ETNK1 ethanolamine kinase 1 -0.0154221