MK-3903_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-3903 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-3903_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.181828
HDAC9 histone deacetylase 9 0.113322
TRIO trio Rho guanine nucleotide exchange factor 0.0993761
MYH9 myosin, heavy chain 9, non-muscle 0.087045
EEF2 eukaryotic translation elongation factor 2 0.08428
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0822086
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0778574
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0669702
CADM1 cell adhesion molecule 1 0.0646027
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0644047
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0630402
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0581604
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0557449
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0554843
ARRDC3 arrestin domain containing 3 0.0523399
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0508019
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0465729
LOC102724023 ES1 protein homolog, mitochondrial 0.0461774
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0457663
RUNX1 runt-related transcription factor 1 0.0454274
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.045161
GOLGB1 golgin B1 0.0448178
ASPH aspartate beta-hydroxylase 0.0447814
ZSWIM6 zinc finger, SWIM-type containing 6 0.042741
CLTC clathrin, heavy chain (Hc) 0.0410154
TXNRD1 thioredoxin reductase 1 0.0406684
APLP2 amyloid beta (A4) precursor-like protein 2 0.0406645
MORF4L2 mortality factor 4 like 2 0.0402599
BIRC3 baculoviral IAP repeat containing 3 0.0401375
CANX calnexin 0.0395554
LDHA lactate dehydrogenase A 0.0387732
SDC4 syndecan 4 0.0385153
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0372535
PGK1 phosphoglycerate kinase 1 0.0365434
GOLGA4 golgin A4 0.0362422
RAB7A RAB7A, member RAS oncogene family 0.0362195
MKI67 marker of proliferation Ki-67 0.0358166
TPM3 tropomyosin 3 0.0352736
YBX1 Y box binding protein 1 0.0351554
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0351051
UBA6 ubiquitin-like modifier activating enzyme 6 0.0347887
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0345958
CD44 CD44 molecule (Indian blood group) 0.0345652
TNIP1 TNFAIP3 interacting protein 1 0.0345332
PRELID2 PRELI domain containing 2 0.0344977
USP9X ubiquitin specific peptidase 9, X-linked 0.03395
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0337081
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0336799
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0335748
PGM3 phosphoglucomutase 3 0.0335662
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0331209
GLS2 glutaminase 2 (liver, mitochondrial) 0.0328413
SMAD3 SMAD family member 3 0.0327548
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0317045
SOX9 SRY (sex determining region Y)-box 9 0.0311412
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.030674
SPAG9 sperm associated antigen 9 0.030208
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0300039
CREB5 cAMP responsive element binding protein 5 0.029466
SNX9 sorting nexin 9 0.0292861
NAV2 neuron navigator 2 0.0291303
RPL4 ribosomal protein L4 0.0289035
TRIP12 thyroid hormone receptor interactor 12 0.0277503
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0277264
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0277222
ZBTB38 zinc finger and BTB domain containing 38 0.027579
IRF1 interferon regulatory factor 1 0.0272981
PDE10A phosphodiesterase 10A 0.0271613
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0270555
SOD2 superoxide dismutase 2, mitochondrial 0.027021
RYBP RING1 and YY1 binding protein 0.0269178
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0268714
IPO7 importin 7 0.0261105
ALCAM activated leukocyte cell adhesion molecule 0.0260912
LAMP2 lysosomal-associated membrane protein 2 0.0259164
KIAA1217 KIAA1217 0.0258575
PDIA3 protein disulfide isomerase family A, member 3 0.0256461
NFE2L2 nuclear factor, erythroid 2-like 2 0.0252693
AHNAK AHNAK nucleoprotein 0.0252312
CALR calreticulin 0.0252256
HSPA8 heat shock 70kDa protein 8 0.0252005
MXI1 MAX interactor 1, dimerization protein 0.0248446
CXCL8 chemokine (C-X-C motif) ligand 8 0.0248063
MT2A metallothionein 2A 0.0247822
IARS1 isoleucyl-tRNA synthetase 1 0.0247197
MBNL1 muscleblind-like splicing regulator 1 0.0246267
ATF3 activating transcription factor 3 0.0244276
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0237762
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0227729
ARFGEF3 ARFGEF family member 3 0.0226687
FRMD5 FERM domain containing 5 0.022562
SHB Src homology 2 domain containing adaptor protein B 0.022517
TLN1 talin 1 0.0224466
IL6ST interleukin 6 signal transducer 0.0223055
ANXA2 annexin A2 0.022198
BRD2 bromodomain containing 2 0.0221667
EEF1G eukaryotic translation elongation factor 1 gamma 0.0221373
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.0221101
FNIP1 folliculin interacting protein 1 0.0220532
PCLO piccolo presynaptic cytomatrix protein 0.0220228

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.19816
TPT1 tumor protein, translationally-controlled 1 -0.114559
BICC1 BicC family RNA binding protein 1 -0.0912729
HLA-B major histocompatibility complex, class I, B -0.0894204
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0871454
ZMYND8 zinc finger, MYND-type containing 8 -0.0867944
CTSD cathepsin D -0.0706313
IGFBP3 insulin-like growth factor binding protein 3 -0.0699286
FBXO32 F-box protein 32 -0.0696372
WSB1 WD repeat and SOCS box containing 1 -0.0628573
FTL ferritin, light polypeptide -0.0625928
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0577171
VCL vinculin -0.0570768
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0551253
TMSB10 thymosin beta 10 -0.0532765
NDRG1 N-myc downstream regulated 1 -0.0523962
CTSB cathepsin B -0.0515329
C3 complement component 3 -0.0482272
GLIS3 GLIS family zinc finger 3 -0.0479977
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.047223
RPL35A ribosomal protein L35a -0.0455069
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.045172
FN1 fibronectin 1 -0.0435119
HLA-A major histocompatibility complex, class I, A -0.0430732
FRMD4A FERM domain containing 4A -0.0427067
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0419264
RAI14 retinoic acid induced 14 -0.0408063
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0403575
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0400432
COL6A3 collagen, type VI, alpha 3 -0.0380544
RPL37A ribosomal protein L37a -0.0372728
ADM adrenomedullin -0.0364463
ARL4C ADP-ribosylation factor-like 4C -0.0360002
IFI6 interferon, alpha-inducible protein 6 -0.0358403
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0357908
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0354513
RPL23 ribosomal protein L23 -0.0349192
ACTG1 actin gamma 1 -0.0336985
PTMA prothymosin, alpha -0.0332366
ENO2 enolase 2 (gamma, neuronal) -0.0327926
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0319958
CDH13 cadherin 13 -0.0308671
GPC6 glypican 6 -0.0305939
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0305677
FTH1 ferritin, heavy polypeptide 1 -0.0305369
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0301189
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0295738
RPLP2 ribosomal protein, large, P2 -0.0292584
SLC38A2 solute carrier family 38, member 2 -0.0288314
CPPED1 calcineurin-like phosphoesterase domain containing 1 -0.0284913
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0283822
GNAS GNAS complex locus -0.0283447
KLHL24 kelch-like family member 24 -0.0278596
RPS13 ribosomal protein S13 -0.0276619
RPL9 ribosomal protein L9 -0.027538
RPS21 ribosomal protein S21 -0.0271284
COL1A1 collagen, type I, alpha 1 -0.0269592
COL6A1 collagen, type VI, alpha 1 -0.0267374
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0263311
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0262566
KPNB1 karyopherin (importin) beta 1 -0.0262385
PLIN2 perilipin 2 -0.0260023
NT5C2 5'-nucleotidase, cytosolic II -0.025955
CALD1 caldesmon 1 -0.0254587
SOX4 SRY (sex determining region Y)-box 4 -0.0252499
TNRC6B trinucleotide repeat containing 6B -0.024858
HLA-E major histocompatibility complex, class I, E -0.0247513
GDF15 growth differentiation factor 15 -0.0246908
IGFBP7 insulin-like growth factor binding protein 7 -0.0246781
RPL31 ribosomal protein L31 -0.02462
TPM4 tropomyosin 4 -0.024492
INSR insulin receptor -0.0238461
RPS29 ribosomal protein S29 -0.0237816
MMP12 matrix metallopeptidase 12 -0.0236962
KLHL5 kelch-like family member 5 -0.0235505
NAV1 neuron navigator 1 -0.0230769
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0229916
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0225991
SDK1 sidekick cell adhesion molecule 1 -0.022517
KLF7 Kruppel-like factor 7 (ubiquitous) -0.022492
EGFR epidermal growth factor receptor -0.0223561
NABP1 nucleic acid binding protein 1 -0.0221017
RAD51B RAD51 paralog B -0.0220601
CTSA cathepsin A -0.0217128
DIAPH2 diaphanous-related formin 2 -0.0216673
FBXO11 F-box protein 11 -0.0215742
HMGA2 high mobility group AT-hook 2 -0.0214298
SOX5 SRY (sex determining region Y)-box 5 -0.0212258
SLC38A1 solute carrier family 38, member 1 -0.021137
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0211332
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0211201
S100A9 S100 calcium binding protein A9 -0.0210829
RPL38 ribosomal protein L38 -0.0209743
ISG15 ISG15 ubiquitin-like modifier -0.020898
UGCG UDP-glucose ceramide glucosyltransferase -0.0206974
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0206563
DENND5B DENN/MADD domain containing 5B -0.0203405
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0203383
NPC1 Niemann-Pick disease, type C1 -0.0203199
DDIT3 DNA-damage-inducible transcript 3 -0.0203087