MK-3903_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-3903 perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-3903_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.16442
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0853344
HMGA2 high mobility group AT-hook 2 0.0702631
HSPA8 heat shock 70kDa protein 8 0.0562972
LAMA4 laminin, alpha 4 0.0549808
RCOR1 REST corepressor 1 0.0535246
IER3 immediate early response 3 0.0530301
SGMS2 sphingomyelin synthase 2 0.052614
SGPP2 sphingosine-1-phosphate phosphatase 2 0.0503592
ACTG1 actin gamma 1 0.0498162
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.04474
BIRC3 baculoviral IAP repeat containing 3 0.0426008
LAMC2 laminin, gamma 2 0.041192
SNX9 sorting nexin 9 0.0410633
CLIP2 CAP-GLY domain containing linker protein 2 0.0409877
SEPTIN9 septin 9 0.0387394
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0387114
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0377205
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0368707
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0352672
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0344503
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0339194
ABR active BCR-related 0.0311838
ZSWIM6 zinc finger, SWIM-type containing 6 0.0294502
ITPKC inositol-trisphosphate 3-kinase C 0.029414
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0291071
NUP50 nucleoporin 50kDa 0.0284947
USP9X ubiquitin specific peptidase 9, X-linked 0.0280106
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0278719
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.027706
TSC22D2 TSC22 domain family, member 2 0.0274551
EGR1 early growth response 1 0.0272905
MYO5B myosin VB 0.0269598
NTSR1 neurotensin receptor 1 (high affinity) 0.0259122
GATAD2A GATA zinc finger domain containing 2A 0.0257693
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0256786
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0253319
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0249982
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0249815
JARID2 jumonji, AT rich interactive domain 2 0.0246183
RPL4 ribosomal protein L4 0.0245367
LAMB3 laminin, beta 3 0.0242538
KLF5 Kruppel-like factor 5 (intestinal) 0.0236415
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0232056
ANXA2 annexin A2 0.0226472
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0222642
MPRIP myosin phosphatase Rho interacting protein 0.0220281
EFNB2 ephrin-B2 0.02191
CCSER1 coiled-coil serine-rich protein 1 0.0216611
LOC102724023 ES1 protein homolog, mitochondrial 0.021389
TTC3 tetratricopeptide repeat domain 3 0.0213351
GPHN gephyrin 0.0213287
DST dystonin 0.0213279
OSBPL8 oxysterol binding protein-like 8 0.0207256
ITGA6 integrin, alpha 6 0.0204613
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0202513
SMAD3 SMAD family member 3 0.0200171
SDC4 syndecan 4 0.0198968
NCEH1 neutral cholesterol ester hydrolase 1 0.0197139
SERTAD2 SERTA domain containing 2 0.0194696
OSBPL10 oxysterol binding protein-like 10 0.0191401
NFE2L2 nuclear factor, erythroid 2-like 2 0.0190222
RAB7A RAB7A, member RAS oncogene family 0.0187982
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0186918
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0184425
FAM107B family with sequence similarity 107, member B 0.01824
CSNK1A1 casein kinase 1, alpha 1 0.0178564
CDCP1 CUB domain containing protein 1 0.0176689
KDM6B lysine (K)-specific demethylase 6B 0.017542
SEC31A SEC31 homolog A (S. cerevisiae) 0.0171355
ARL5B ADP-ribosylation factor-like 5B 0.0171104
SH3RF2 SH3 domain containing ring finger 2 0.0170622
SPATS2L spermatogenesis associated, serine-rich 2-like 0.01701
TPT1 tumor protein, translationally-controlled 1 0.0169415
CD44 CD44 molecule (Indian blood group) 0.0168566
GPC5 glypican 5 0.0167838
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0167431
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0166716
DSG2 desmoglein 2 0.0166651
EGFR epidermal growth factor receptor 0.0166285
HOMER1 homer scaffolding protein 1 0.0164779
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0163398
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0163051
GNG4 guanine nucleotide binding protein (G protein), gamma 4 0.0162035
TPM3 tropomyosin 3 0.0155582
BRD2 bromodomain containing 2 0.0153549
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0153547
ZFP36L1 ZFP36 ring finger protein-like 1 0.0149
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0148118
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0148099
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0146937
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0146259
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0144244
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0143935
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0143896
GPATCH2L G patch domain containing 2-like 0.0141653
CREB5 cAMP responsive element binding protein 5 0.0138564
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0138372
ABTB3 ankyrin repeat and BTB domain containing 3 0.0138254
RNASEH2A ribonuclease H2, subunit A 0.0136337

decreased expression

Symbol Name Standardized Value
CD36 CD36 molecule (thrombospondin receptor) -0.193422
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.12756
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.117518
OXR1 oxidation resistance 1 -0.0854321
LMO7 LIM domain 7 -0.0628948
PTMA prothymosin, alpha -0.0600454
HDAC2 histone deacetylase 2 -0.0597851
RNF43 ring finger protein 43 -0.0560676
RUNX2 runt-related transcription factor 2 -0.0515608
ANXA1 annexin A1 -0.0480173
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.04538
EEF2 eukaryotic translation elongation factor 2 -0.0440639
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.040759
SERINC5 serine incorporator 5 -0.0390936
PCBP2 poly(rC) binding protein 2 -0.0380422
RAD51B RAD51 paralog B -0.0372169
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0347069
RBM25 RNA binding motif protein 25 -0.0339389
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0321742
EZR ezrin -0.0309976
AREG amphiregulin -0.0308959
RPS3 ribosomal protein S3 -0.0307997
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0303572
GNAT3 guanine nucleotide binding protein, alpha transducing 3 -0.0291127
EREG epiregulin -0.02874
FAT1 FAT atypical cadherin 1 -0.0283574
GARS1 glycyl-tRNA synthetase 1 -0.027932
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0277343
UBC ubiquitin C -0.0272264
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0267694
AXIN2 axin 2 -0.0261833
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0259014
CENPF centromere protein F, 350/400kDa -0.0254714
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.024771
NEMF nuclear export mediator factor -0.0244983
RPS6 ribosomal protein S6 -0.0244117
ACTN4 actinin, alpha 4 -0.0240174
NEK7 NIMA-related kinase 7 -0.0238195
GDF15 growth differentiation factor 15 -0.0236338
CUX1 cut-like homeobox 1 -0.0230945
KITLG KIT ligand -0.0230441
RPS27A ribosomal protein S27a -0.0225938
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like -0.0224915
AOPEP aminopeptidase O (putative) -0.022456
CEP152 centrosomal protein 152kDa -0.0219553
RPL23 ribosomal protein L23 -0.0217702
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0210613
MSI2 musashi RNA-binding protein 2 -0.020944
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0207412
RAB6A RAB6A, member RAS oncogene family -0.0206754
TXNIP thioredoxin interacting protein -0.0205881
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0205339
KLF3 Kruppel-like factor 3 (basic) -0.0205069
FAR1 fatty acyl CoA reductase 1 -0.0203742
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0200939
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0198239
ANLN anillin, actin binding protein -0.0197875
RBM39 RNA binding motif protein 39 -0.0197306
PNISR PNN-interacting serine/arginine-rich protein -0.0195164
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0192145
ANKRD28 ankyrin repeat domain 28 -0.0191946
RPS29 ribosomal protein S29 -0.0191744
ESRP1 epithelial splicing regulatory protein 1 -0.0190048
TNRC6B trinucleotide repeat containing 6B -0.0187228
ARHGAP42 Rho GTPase activating protein 42 -0.018569
OSBPL3 oxysterol binding protein-like 3 -0.0185225
OGA O-GlcNAcase -0.0183729
BIRC6 baculoviral IAP repeat containing 6 -0.0182536
PDLIM5 PDZ and LIM domain 5 -0.0182309
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0180725
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0180374
PCNX1 pecanex 1 -0.0179302
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0175096
RPL31 ribosomal protein L31 -0.0174249
COG5 component of oligomeric golgi complex 5 -0.0169291
PERP PERP, TP53 apoptosis effector -0.0169242
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0169185
NPEPPS aminopeptidase puromycin sensitive -0.0167217
GSK3B glycogen synthase kinase 3 beta -0.0166335
FAM3C family with sequence similarity 3, member C -0.0165356
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 -0.0162647
PTBP2 polypyrimidine tract binding protein 2 -0.0161733
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0161569
ITPRID2 ITPR interacting domain containing 2 -0.0161327
EIF1 eukaryotic translation initiation factor 1 -0.0160216
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0158859
GOLGA4 golgin A4 -0.0158676
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0157964
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0154329
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0154147
TNS3 tensin 3 -0.0154112
LDHA lactate dehydrogenase A -0.0153868
RPL26 ribosomal protein L26 -0.0153793
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0149932
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) -0.0147346
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0147165
NCKAP1 NCK-associated protein 1 -0.0147093
BRWD1 bromodomain and WD repeat domain containing 1 -0.0146142
PHIP pleckstrin homology domain interacting protein -0.0146084
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0144114