MK-8353_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-8353 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-8353_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.172622
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.144143
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0785681
GOLGB1 golgin B1 0.0709541
RND3 Rho family GTPase 3 0.0694062
APLP2 amyloid beta (A4) precursor-like protein 2 0.064436
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0640097
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0620421
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0603504
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0594494
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0578948
RPS2 ribosomal protein S2 0.0563902
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0550524
B2M beta-2-microglobulin 0.0546172
ZSWIM6 zinc finger, SWIM-type containing 6 0.0545322
ENO1 enolase 1, (alpha) 0.0488562
AHNAK AHNAK nucleoprotein 0.0471699
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0471629
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0465611
JMJD1C jumonji domain containing 1C 0.0451452
ATXN1 ataxin 1 0.0449214
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.044409
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0441525
ERRFI1 ERBB receptor feedback inhibitor 1 0.044137
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.043884
SQSTM1 sequestosome 1 0.0420778
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0412299
MBNL2 muscleblind-like splicing regulator 2 0.0406435
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0405358
ARFGEF3 ARFGEF family member 3 0.0404368
MSN moesin 0.0402332
TPM3 tropomyosin 3 0.0401811
CD44 CD44 molecule (Indian blood group) 0.0386454
ASPH aspartate beta-hydroxylase 0.0385606
FNIP1 folliculin interacting protein 1 0.0375441
NAV2 neuron navigator 2 0.036005
RIGI RNA sensor RIG-I 0.0357702
SFTPA2 surfactant protein A2 0.0355699
MYOF myoferlin 0.03502
MBNL1 muscleblind-like splicing regulator 1 0.0346451
VMP1 vacuole membrane protein 1 0.0345327
C6ORF62 chromosome 6 open reading frame 62 0.0342365
MORF4L2 mortality factor 4 like 2 0.033201
SMAD3 SMAD family member 3 0.0329059
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0320812
VEGFA vascular endothelial growth factor A 0.0320811
MX1 MX dynamin-like GTPase 1 0.0319135
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0301444
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0298011
ANKRD28 ankyrin repeat domain 28 0.0295079
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0293553
SOX9 SRY (sex determining region Y)-box 9 0.0293361
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0290827
ZBTB38 zinc finger and BTB domain containing 38 0.0286621
FNDC3B fibronectin type III domain containing 3B 0.0272845
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.0268998
RPS12 ribosomal protein S12 0.0268684
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0267626
PPARD peroxisome proliferator-activated receptor delta 0.0261751
TNS3 tensin 3 0.0260299
INTS6 integrator complex subunit 6 0.0259316
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0257671
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0256661
AHR aryl hydrocarbon receptor 0.025282
PDIA3 protein disulfide isomerase family A, member 3 0.0251981
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0251611
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0250181
ARRDC3 arrestin domain containing 3 0.0249394
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0248999
AKAP9 A kinase (PRKA) anchor protein 9 0.0247578
EEF1G eukaryotic translation elongation factor 1 gamma 0.0237722
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.023704
KYNU kynureninase 0.0234051
CREB5 cAMP responsive element binding protein 5 0.0234022
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0231076
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0229716
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0229389
KTN1 kinectin 1 (kinesin receptor) 0.0225071
DST dystonin 0.0224365
BRD2 bromodomain containing 2 0.0223398
TLE4 transducin-like enhancer of split 4 0.0223232
LOXL2 lysyl oxidase-like 2 0.0222463
RPL4 ribosomal protein L4 0.0222305
GPR176 G protein-coupled receptor 176 0.0221172
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0218733
PHF3 PHD finger protein 3 0.0218267
TXNIP thioredoxin interacting protein 0.0217897
FER fer (fps/fes related) tyrosine kinase 0.0216895
FAM107B family with sequence similarity 107, member B 0.0216143
PDE4D phosphodiesterase 4D, cAMP-specific 0.021527
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0213692
OPTN optineurin 0.021338
BIRC3 baculoviral IAP repeat containing 3 0.0211867
DUSP10 dual specificity phosphatase 10 0.0211711
USP9X ubiquitin specific peptidase 9, X-linked 0.0210287
EZR ezrin 0.0209895
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0208705
ARHGAP26 Rho GTPase activating protein 26 0.0208577
MYADM myeloid-associated differentiation marker 0.0207888
SLC38A2 solute carrier family 38, member 2 0.0207872

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.17224
TPT1 tumor protein, translationally-controlled 1 -0.156545
TMSB10 thymosin beta 10 -0.134127
IER3 immediate early response 3 -0.130493
HLA-B major histocompatibility complex, class I, B -0.126374
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.111207
NAMPT nicotinamide phosphoribosyltransferase -0.110164
PTMA prothymosin, alpha -0.0992169
FTL ferritin, light polypeptide -0.0920482
FN1 fibronectin 1 -0.0776616
ZMYND8 zinc finger, MYND-type containing 8 -0.0726675
WSB1 WD repeat and SOCS box containing 1 -0.0707057
UGCG UDP-glucose ceramide glucosyltransferase -0.0704672
PGK1 phosphoglycerate kinase 1 -0.0653499
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0611279
COL1A1 collagen, type I, alpha 1 -0.0596551
GNAS GNAS complex locus -0.0596048
RPS24 ribosomal protein S24 -0.0577038
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0568014
GLIS3 GLIS family zinc finger 3 -0.0554179
FRMD4A FERM domain containing 4A -0.0540364
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0528232
ATP13A3 ATPase type 13A3 -0.0522799
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0519085
CADM1 cell adhesion molecule 1 -0.0518325
ZFAND3 zinc finger, AN1-type domain 3 -0.051211
ELL2 elongation factor, RNA polymerase II, 2 -0.0506693
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0485856
RPL35A ribosomal protein L35a -0.0463701
NPEPPS aminopeptidase puromycin sensitive -0.0439279
KDM3A lysine (K)-specific demethylase 3A -0.04391
CTSD cathepsin D -0.0406373
RPS21 ribosomal protein S21 -0.0397555
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0381316
OGA O-GlcNAcase -0.0375632
TMSB4X thymosin beta 4, X-linked -0.0373311
ADM adrenomedullin -0.0369774
QKI QKI, KH domain containing, RNA binding -0.035706
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0355973
MARCHF6 membrane associated ring-CH-type finger 6 -0.0347185
TUBB tubulin, beta class I -0.0337082
HMGA1 high mobility group AT-hook 1 -0.0336131
CDH13 cadherin 13 -0.0332437
RPLP2 ribosomal protein, large, P2 -0.0331258
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0327392
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.032736
ACTG1 actin gamma 1 -0.0325284
BASP1 brain abundant, membrane attached signal protein 1 -0.0324391
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.032377
CAVIN1 caveolae associated protein 1 -0.0316962
RPL37A ribosomal protein L37a -0.0316683
SLC38A1 solute carrier family 38, member 1 -0.0312741
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0312262
CD63 CD63 molecule -0.0312233
NRN1 neuritin 1 -0.0309461
RPL36A ribosomal protein L36a -0.0308393
RPL9 ribosomal protein L9 -0.0303096
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0298356
RAB6A RAB6A, member RAS oncogene family -0.0293487
PRRC2C proline-rich coiled-coil 2C -0.0289025
ZNF292 zinc finger protein 292 -0.028434
CTSB cathepsin B -0.0281955
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0280375
RPL34 ribosomal protein L34 -0.027924
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0276617
SEPTIN7 septin 7 -0.0273932
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0272485
VDAC1 voltage-dependent anion channel 1 -0.0272412
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0272217
FBXO32 F-box protein 32 -0.0271205
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.026506
SFRP1 secreted frizzled-related protein 1 -0.0261332
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0261141
NT5C2 5'-nucleotidase, cytosolic II -0.026009
ANXA2 annexin A2 -0.0259554
HLA-A major histocompatibility complex, class I, A -0.0259264
KPNB1 karyopherin (importin) beta 1 -0.0253658
PTBP3 polypyrimidine tract binding protein 3 -0.0253128
LCORL ligand dependent nuclear receptor corepressor-like -0.0250533
IGF2R insulin-like growth factor 2 receptor -0.0249515
ICAM1 intercellular adhesion molecule 1 -0.0248649
ABI3BP ABI family, member 3 (NESH) binding protein -0.0247644
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0247162
RPS23 ribosomal protein S23 -0.0247048
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0246324
RPLP0 ribosomal protein, large, P0 -0.0245977
TMEM123 transmembrane protein 123 -0.0245633
TGFBI transforming growth factor, beta-induced, 68kDa -0.024225
RAI14 retinoic acid induced 14 -0.024211
SRGN serglycin -0.0241968
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.024075
PTPRF protein tyrosine phosphatase, receptor type, F -0.0235528
TMEM263 transmembrane protein 263 -0.0235062
PHF21A PHD finger protein 21A -0.0234947
RPL11 ribosomal protein L11 -0.0231779
RPL19 ribosomal protein L19 -0.0230283
RBM39 RNA binding motif protein 39 -0.0227324
COL6A2 collagen, type VI, alpha 2 -0.0226215
MT2A metallothionein 2A -0.0224922
FAM162A family with sequence similarity 162, member A -0.0222719