MK-8353_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description MK-8353 perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the MK-8353_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.179813
LAMA4 laminin, alpha 4 0.135752
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.133921
EGFR epidermal growth factor receptor 0.129485
RCOR1 REST corepressor 1 0.118694
ACTG1 actin gamma 1 0.093356
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0914126
EMP1 epithelial membrane protein 1 0.0911153
EGR1 early growth response 1 0.0864772
AHNAK AHNAK nucleoprotein 0.0863535
ANXA2 annexin A2 0.0816876
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0798084
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0771835
ITPKC inositol-trisphosphate 3-kinase C 0.0754316
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0737077
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0730939
SNX9 sorting nexin 9 0.0715072
KLF5 Kruppel-like factor 5 (intestinal) 0.0710784
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0693788
FLOT1 flotillin 1 0.0684301
HMGA2 high mobility group AT-hook 2 0.068422
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0676475
LAMC2 laminin, gamma 2 0.0671635
CLIP2 CAP-GLY domain containing linker protein 2 0.06692
DSPP dentin sialophosphoprotein 0.0638407
SGMS2 sphingomyelin synthase 2 0.0637496
BIRC3 baculoviral IAP repeat containing 3 0.0622083
LOC102724023 ES1 protein homolog, mitochondrial 0.0618812
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0614218
ITGA6 integrin, alpha 6 0.0612785
TPM4 tropomyosin 4 0.0609793
ATXN1 ataxin 1 0.0604446
VCL vinculin 0.059625
CCSER1 coiled-coil serine-rich protein 1 0.0588281
NUP50 nucleoporin 50kDa 0.0574717
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0564171
MACF1 microtubule-actin crosslinking factor 1 0.0546173
PLAUR plasminogen activator, urokinase receptor 0.0533931
EZR ezrin 0.0529726
CANX calnexin 0.0520313
PDIA3 protein disulfide isomerase family A, member 3 0.0511381
SGPP2 sphingosine-1-phosphate phosphatase 2 0.0508504
EXOC4 exocyst complex component 4 0.0505336
CREB5 cAMP responsive element binding protein 5 0.0501225
OSBPL10 oxysterol binding protein-like 10 0.0494764
HSPA8 heat shock 70kDa protein 8 0.0491137
ZSWIM6 zinc finger, SWIM-type containing 6 0.0483402
JARID2 jumonji, AT rich interactive domain 2 0.0477906
ABR active BCR-related 0.0474734
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0461836
SEPTIN9 septin 9 0.0452182
ZFP36L1 ZFP36 ring finger protein-like 1 0.0450468
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0449291
SEC31A SEC31 homolog A (S. cerevisiae) 0.0434908
FHL2 four and a half LIM domains 2 0.0421016
AKAP13 A kinase (PRKA) anchor protein 13 0.041446
MYO5B myosin VB 0.0413757
SET SET nuclear proto-oncogene 0.0385679
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0385377
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0384185
PABPC1 poly(A) binding protein, cytoplasmic 1 0.038261
POTEF POTE ankyrin domain family, member F 0.0382493
RPL4 ribosomal protein L4 0.0381669
CD9 CD9 molecule 0.0373328
PERP PERP, TP53 apoptosis effector 0.0369639
FRAS1 Fraser extracellular matrix complex subunit 1 0.0367807
USP9X ubiquitin specific peptidase 9, X-linked 0.0360967
ARHGAP42 Rho GTPase activating protein 42 0.0345214
BPTF bromodomain PHD finger transcription factor 0.0340505
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.033914
LMO7 LIM domain 7 0.0336479
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0334669
CDCP1 CUB domain containing protein 1 0.033402
MPRIP myosin phosphatase Rho interacting protein 0.0333633
KLF6 Kruppel-like factor 6 0.0333223
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0333161
ENO1 enolase 1, (alpha) 0.0332564
EXT1 exostosin glycosyltransferase 1 0.0332552
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0325462
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0324834
DSC3 desmocollin 3 0.0324638
LAMB3 laminin, beta 3 0.0323579
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.032258
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0320178
CUX1 cut-like homeobox 1 0.03149
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0314396
HOMER1 homer scaffolding protein 1 0.0312258
NFE2L2 nuclear factor, erythroid 2-like 2 0.0308498
SH3RF2 SH3 domain containing ring finger 2 0.0307965
EFNB2 ephrin-B2 0.0306545
DOCK5 dedicator of cytokinesis 5 0.03043
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0301605
TRAF3 TNF receptor-associated factor 3 0.0301045
AKAP9 A kinase (PRKA) anchor protein 9 0.0300716
PATJ PATJ crumbs cell polarity complex component 0.0299967
GATAD2A GATA zinc finger domain containing 2A 0.0299243
SCFD1 sec1 family domain containing 1 0.0297879
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0295233
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0294975
FHIT fragile histidine triad 0.0292016

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0975389
RNF43 ring finger protein 43 -0.0727642
TPT1 tumor protein, translationally-controlled 1 -0.0681315
RPL35A ribosomal protein L35a -0.0676551
TMSB10 thymosin beta 10 -0.0623277
TOP1 topoisomerase (DNA) I -0.0576071
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0482621
MT2A metallothionein 2A -0.0476173
RPS24 ribosomal protein S24 -0.047082
GOLGA4 golgin A4 -0.0466391
RBM25 RNA binding motif protein 25 -0.0459551
NDRG1 N-myc downstream regulated 1 -0.0446326
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0419246
RPL26 ribosomal protein L26 -0.0373017
RUNX2 runt-related transcription factor 2 -0.0369322
TXNRD1 thioredoxin reductase 1 -0.0368914
COG5 component of oligomeric golgi complex 5 -0.0346362
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0343882
KDM6A lysine (K)-specific demethylase 6A -0.0332868
HLA-B major histocompatibility complex, class I, B -0.0332312
USP3 ubiquitin specific peptidase 3 -0.0328863
ZMYM2 zinc finger, MYM-type 2 -0.0325305
NT5DC3 5'-nucleotidase domain containing 3 -0.0324058
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0319505
CD36 CD36 molecule (thrombospondin receptor) -0.0314845
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor -0.0314194
STRN3 striatin, calmodulin binding protein 3 -0.0309811
RPS29 ribosomal protein S29 -0.0305454
OSBPL3 oxysterol binding protein-like 3 -0.0300323
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0293534
PUM2 pumilio RNA-binding family member 2 -0.0292897
RPL37A ribosomal protein L37a -0.0291095
BRWD1 bromodomain and WD repeat domain containing 1 -0.0288655
RPL11 ribosomal protein L11 -0.0285907
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.028263
RPS13 ribosomal protein S13 -0.0271693
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0271605
MSI2 musashi RNA-binding protein 2 -0.027151
RFX7 regulatory factor X, 7 -0.0268811
NAMPT nicotinamide phosphoribosyltransferase -0.0268105
PNISR PNN-interacting serine/arginine-rich protein -0.026793
RBM39 RNA binding motif protein 39 -0.0267405
RPL36 ribosomal protein L36 -0.0261948
NFIA nuclear factor I/A -0.0261458
THSD4 thrombospondin, type I, domain containing 4 -0.0254964
WDR43 WD repeat domain 43 -0.0252883
EWSR1 EWS RNA-binding protein 1 -0.0249628
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0245403
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0240235
NPEPPS aminopeptidase puromycin sensitive -0.0237626
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0237275
TRIO trio Rho guanine nucleotide exchange factor -0.0234144
PTBP2 polypyrimidine tract binding protein 2 -0.0233558
RPL9 ribosomal protein L9 -0.0231419
FAM3C family with sequence similarity 3, member C -0.0231297
AOPEP aminopeptidase O (putative) -0.0230387
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0230294
ANKRD28 ankyrin repeat domain 28 -0.0226298
OGA O-GlcNAcase -0.022486
ANKRD11 ankyrin repeat domain 11 -0.0224034
ZFAND3 zinc finger, AN1-type domain 3 -0.0222832
FNDC3B fibronectin type III domain containing 3B -0.0222181
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0221432
WAC WW domain containing adaptor with coiled-coil -0.0219358
AREG amphiregulin -0.0216722
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0213987
MAP4 microtubule-associated protein 4 -0.0213625
RNF145 ring finger protein 145 -0.0211463
TRA2A transformer 2 alpha homolog (Drosophila) -0.0210576
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0208206
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0207543
RPL13A ribosomal protein L13a -0.0205787
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0205182
RPS21 ribosomal protein S21 -0.0204643
RPS3 ribosomal protein S3 -0.0204541
WDR45B WD repeat domain 45B -0.0203623
USP24 ubiquitin specific peptidase 24 -0.0203531
XPO7 exportin 7 -0.0201821
NGLY1 N-glycanase 1 -0.0200841
NAP1L1 nucleosome assembly protein 1-like 1 -0.0199527
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0199373
CAMKMT calmodulin-lysine N-methyltransferase -0.0197043
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0196874
IARS1 isoleucyl-tRNA synthetase 1 -0.0193508
NBAS neuroblastoma amplified sequence -0.0193183
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) -0.0192138
SEC24D SEC24 family member D -0.0188994
ELP2 elongator acetyltransferase complex subunit 2 -0.0187609
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) -0.0187156
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0186525
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0185258
GDF15 growth differentiation factor 15 -0.0185089
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0183914
SLMAP sarcolemma associated protein -0.0182634
NEMF nuclear export mediator factor -0.018255
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0180782
S100A9 S100 calcium binding protein A9 -0.0180563
OXR1 oxidation resistance 1 -0.0179834
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0178478
PDIA5 protein disulfide isomerase family A, member 5 -0.0178185