MKN7 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description A immortal human stomach-derived cell line cell that has the characteristics: c-erbB-2 expressing gastric adenocarcinoma. Differentiated type. (Cell Line Ontology, CLO_0050805)
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Genes

55 genes with high or low copy number in MKN7 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
FFAR1 free fatty acid receptor 1 2.44392
LSR lipolysis stimulated lipoprotein receptor 2.44392
CD22 CD22 molecule 2.44392
USF2 upstream transcription factor 2, c-fos interacting 2.44392
LOC100128682 2.44392
FFAR2 free fatty acid receptor 2 2.44392
MAG myelin associated glycoprotein 2.44392
MIR5196 microRNA 5196 2.44392
HAMP hepcidin antimicrobial peptide 2.44392
CHST8 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 2.39327
KCTD15 potassium channel tetramerization domain containing 15 2.39327
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma 2.36889
CEBPA-AS1 CEBPA antisense RNA 1 (head to head) 2.36889
PEPD peptidase D 2.36889
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha 2.36889
CACNB1 calcium channel, voltage-dependent, beta 1 subunit 2.283
STAC2 SH3 and cysteine rich domain 2 2.283
RPL19 ribosomal protein L19 2.283
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1 2.25904
MED1 mediator complex subunit 1 2.24845
FBXL20 F-box and leucine-rich repeat protein 20 2.24845
C19ORF12 chromosome 19 open reading frame 12 2.24845
URI1 URI1, prefoldin-like chaperone 2.2355
CCNE1 cyclin E1 2.2355
CDK12 cyclin-dependent kinase 12 2.22558
ZPBP2 zona pellucida binding protein 2 2.22291
NEUROD2 neuronal differentiation 2 2.22123
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 2.21258
STARD3 StAR-related lipid transfer (START) domain containing 3 2.21096
TCAP titin-cap 2.20309
PNMT phenylethanolamine N-methyltransferase 2.20309
MIR4728 microRNA 4728 2.20053
GRB7 growth factor receptor-bound protein 7 2.20053
ERBB2 erb-b2 receptor tyrosine kinase 2 2.20053
MIEN1 migration and invasion enhancer 1 2.20053
PGAP3 post-GPI attachment to proteins 3 2.20053
IKZF3 IKAROS family zinc finger 3 (Aiolos) 2.19863
DERL1 derlin 1 2.18778
FFAR3 free fatty acid receptor 3 2.12053

low copy number

Symbol Name Standardized Value
MATN2 matrilin 2 -3.42115
DUSP16 dual specificity phosphatase 16 -3.39516
PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 -3.32901
SI sucrase-isomaltase (alpha-glucosidase) -3.27164
CREBL2 cAMP responsive element binding protein-like 2 -3.16503
SMYD3 SET and MYND domain containing 3 -3.15836
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -3.00065
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6 -2.87511
HLA-H major histocompatibility complex, class I, H (pseudogene) -2.8504
HLA-J major histocompatibility complex, class I, J (pseudogene) -2.8473
SIGLEC14 sialic acid binding Ig-like lectin 14 -2.82637
MIR4767 microRNA 4767 -2.82043
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1 -2.80688
LOC649352 ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like -2.80262
STS steroid sulfatase (microsomal), isozyme S -2.7778
HCG4B HLA complex group 4B (non-protein coding) -2.75184