ML264_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ML264 perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ML264_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.233783
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.13437
PABPC1 poly(A) binding protein, cytoplasmic 1 0.117049
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0991293
IGFBP3 insulin-like growth factor binding protein 3 0.0937622
CDH13 cadherin 13 0.0936912
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0927172
COL1A2 collagen, type I, alpha 2 0.0912209
ENO1 enolase 1, (alpha) 0.0777572
CADM1 cell adhesion molecule 1 0.0735926
CANX calnexin 0.0703903
TRIO trio Rho guanine nucleotide exchange factor 0.0687123
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0681146
NDRG1 N-myc downstream regulated 1 0.0646243
EEF2 eukaryotic translation elongation factor 2 0.0627377
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0608801
CALR calreticulin 0.0603057
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.059005
FNDC3B fibronectin type III domain containing 3B 0.0520206
VEGFA vascular endothelial growth factor A 0.0507175
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0505846
MYH9 myosin, heavy chain 9, non-muscle 0.0504636
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0481202
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0452566
CXCL8 chemokine (C-X-C motif) ligand 8 0.0436075
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0434712
RPS8 ribosomal protein S8 0.0432958
FBN1 fibrillin 1 0.0430977
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0429882
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0421078
CALU calumenin 0.0412656
TGFBI transforming growth factor, beta-induced, 68kDa 0.0407694
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0398373
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0393181
COL5A1 collagen, type V, alpha 1 0.0386895
GOLGB1 golgin B1 0.0376945
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0372641
SOD2 superoxide dismutase 2, mitochondrial 0.0362977
ASPH aspartate beta-hydroxylase 0.036261
JARID2 jumonji, AT rich interactive domain 2 0.0360964
ALCAM activated leukocyte cell adhesion molecule 0.035912
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0352103
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0347998
TPT1 tumor protein, translationally-controlled 1 0.0345466
SQSTM1 sequestosome 1 0.0345071
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0337037
PTK2 protein tyrosine kinase 2 0.033365
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0319582
ADM adrenomedullin 0.0319484
STC2 stanniocalcin 2 0.0314941
MTDH metadherin 0.0313247
NAMPT nicotinamide phosphoribosyltransferase 0.0312536
RAB2A RAB2A, member RAS oncogene family 0.031215
MYO10 myosin X 0.0303959
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0298012
GOLGA4 golgin A4 0.0292459
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0291092
PGM3 phosphoglucomutase 3 0.0290771
TTC3 tetratricopeptide repeat domain 3 0.0286813
GANAB glucosidase, alpha; neutral AB 0.0281561
POSTN periostin, osteoblast specific factor 0.0281407
PDIA3 protein disulfide isomerase family A, member 3 0.0276741
ZSWIM6 zinc finger, SWIM-type containing 6 0.0275688
COL3A1 collagen, type III, alpha 1 0.0270489
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0270109
FN1 fibronectin 1 0.0267524
RAB1A RAB1A, member RAS oncogene family 0.0264896
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0264151
PDE10A phosphodiesterase 10A 0.0263823
MACF1 microtubule-actin crosslinking factor 1 0.0259668
PDIA6 protein disulfide isomerase family A, member 6 0.0249549
RPS12 ribosomal protein S12 0.0245814
NAP1L1 nucleosome assembly protein 1-like 1 0.0240997
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0236365
NAV2 neuron navigator 2 0.0234096
YBX1 Y box binding protein 1 0.0228767
JUN jun proto-oncogene 0.0228756
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0227947
PICALM phosphatidylinositol binding clathrin assembly protein 0.0226843
RND3 Rho family GTPase 3 0.0226
ZFAND3 zinc finger, AN1-type domain 3 0.0225972
ARRDC3 arrestin domain containing 3 0.0223863
RPS3 ribosomal protein S3 0.0219838
LIMS1 LIM and senescent cell antigen-like domains 1 0.0219152
HYOU1 hypoxia up-regulated 1 0.021744
FXR1 fragile X mental retardation, autosomal homolog 1 0.0216842
TPM3 tropomyosin 3 0.021298
HILPDA hypoxia inducible lipid droplet-associated 0.0212489
RAB7A RAB7A, member RAS oncogene family 0.0211981
ANKRD11 ankyrin repeat domain 11 0.020938
QKI QKI, KH domain containing, RNA binding 0.0209097
FNIP1 folliculin interacting protein 1 0.0207744
TRAM1 translocation associated membrane protein 1 0.0207699
SFPQ splicing factor proline/glutamine-rich 0.0207579
PCBP2 poly(rC) binding protein 2 0.0206779
NALF1 NALCN channel auxiliary factor 1 0.0206772
CCNY cyclin Y 0.0205919
KTN1 kinectin 1 (kinesin receptor) 0.0204743
TFG TRK-fused gene 0.0204153
DST dystonin 0.0203741

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.1071
MT2A metallothionein 2A -0.0696132
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0694982
ZBTB20 zinc finger and BTB domain containing 20 -0.0336315
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0324073
HMGA2 high mobility group AT-hook 2 -0.0312829
PSD3 pleckstrin and Sec7 domain containing 3 -0.0307129
DPYD dihydropyrimidine dehydrogenase -0.0289187
MT1X metallothionein 1X -0.0286881
OSMR oncostatin M receptor -0.0270552
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0265511
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0248043
LOC112694756 uncharaterized LOC112694756 -0.0247818
PALLD palladin, cytoskeletal associated protein -0.0225057
GLIS3 GLIS family zinc finger 3 -0.0219749
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0214146
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0211192
WWTR1 WW domain containing transcription regulator 1 -0.0202547
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0188444
RIGI RNA sensor RIG-I -0.0184892
HAS2 hyaluronan synthase 2 -0.0176342
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0174285
DPYSL3 dihydropyrimidinase-like 3 -0.0169599
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0168398
SAMD9 sterile alpha motif domain containing 9 -0.0167009
VCL vinculin -0.0166994
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0166088
STAT1 signal transducer and activator of transcription 1, 91kDa -0.015324
TRPS1 trichorhinophalangeal syndrome I -0.0152641
RPLP1 ribosomal protein, large, P1 -0.0145003
EBF1 early B-cell factor 1 -0.0140567
CAVIN1 caveolae associated protein 1 -0.0136647
RPL32 ribosomal protein L32 -0.0136279
MAP1B microtubule-associated protein 1B -0.0131656
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0131372
FRMD4A FERM domain containing 4A -0.0131341
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0131172
F3 coagulation factor III (thromboplastin, tissue factor) -0.0130497
KLF6 Kruppel-like factor 6 -0.012804
FTL ferritin, light polypeptide -0.0125109
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0122143
IFI6 interferon, alpha-inducible protein 6 -0.0120813
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.0119868
ANTXR2 anthrax toxin receptor 2 -0.0119281
NREP neuronal regeneration related protein -0.0118606
STK38L serine/threonine kinase 38 like -0.0118347
MBNL1 muscleblind-like splicing regulator 1 -0.0117201
EHD2 EH-domain containing 2 -0.0117147
AOPEP aminopeptidase O (putative) -0.0116986
DLG1 discs, large homolog 1 (Drosophila) -0.011564
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0115363
PIEZO2 piezo-type mechanosensitive ion channel component 2 -0.0112902
JAK2 Janus kinase 2 -0.0112746
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0111285
S100A6 S100 calcium binding protein A6 -0.0110178
EGR1 early growth response 1 -0.0109773
PLSCR1 phospholipid scramblase 1 -0.0108414
MTSS1 metastasis suppressor 1 -0.0107093
ARHGAP29 Rho GTPase activating protein 29 -0.0104235
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.0102849
IFITM3 interferon induced transmembrane protein 3 -0.0102556
ACTN4 actinin, alpha 4 -0.0102104
ZMYND8 zinc finger, MYND-type containing 8 -0.00986166
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.00976458
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.00953816
CAPNS1 calpain, small subunit 1 -0.00949697
RFTN1 raftlin, lipid raft linker 1 -0.00926184
ODF2L outer dense fiber of sperm tails 2-like -0.00914797
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.00905954
JMJD1C jumonji domain containing 1C -0.0090531
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.00904026
LMAN1 lectin, mannose-binding, 1 -0.00902992
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0090035
ICAM1 intercellular adhesion molecule 1 -0.0089648
COL1A1 collagen, type I, alpha 1 -0.00896066
KIAA1217 KIAA1217 -0.00894434
SOX4 SRY (sex determining region Y)-box 4 -0.00892158
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0088967
MBD5 methyl-CpG binding domain protein 5 -0.0088563
FAM20C family with sequence similarity 20, member C -0.0087581
RPS24 ribosomal protein S24 -0.00875549
LY6E lymphocyte antigen 6 complex, locus E -0.00862239
CCL5 chemokine (C-C motif) ligand 5 -0.00859097
CBX3 chromobox homolog 3 -0.00858818
SH3PXD2B SH3 and PX domains 2B -0.00841114
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.00825675
FHL2 four and a half LIM domains 2 -0.00821615
TPM1 tropomyosin 1 (alpha) -0.00818344
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.00816542
TAPBP TAP binding protein (tapasin) -0.00808743
CAV1 caveolin 1, caveolae protein, 22kDa -0.00808163
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.00805937
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.00805298
NPC1 Niemann-Pick disease, type C1 -0.00795192
SMAD3 SMAD family member 3 -0.00792818
GPR141 G protein-coupled receptor 141 -0.00790593
RPS19 ribosomal protein S19 -0.00776095
MX2 MX dynamin-like GTPase 2 -0.00774094
TENM1 teneurin transmembrane protein 1 -0.00771411
CFB complement factor B -0.00767946