ML264_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ML264 perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ML264_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0877909
LMO7 LIM domain 7 0.0843803
AREG amphiregulin 0.0661204
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0542246
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0481371
CMIP c-Maf inducing protein 0.0418097
EXT1 exostosin glycosyltransferase 1 0.0386947
APLP2 amyloid beta (A4) precursor-like protein 2 0.0379731
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0333506
HM13 histocompatibility (minor) 13 0.0329145
AKAP13 A kinase (PRKA) anchor protein 13 0.0323871
SEPTIN9 septin 9 0.0312959
HYOU1 hypoxia up-regulated 1 0.0312425
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0298455
GOLGB1 golgin B1 0.0288832
GDA guanine deaminase 0.0285855
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0281667
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0260602
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0252181
ANXA1 annexin A1 0.0250689
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0249106
FAM107B family with sequence similarity 107, member B 0.0242365
GCLC glutamate-cysteine ligase, catalytic subunit 0.0227844
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.0227133
SEC31A SEC31 homolog A (S. cerevisiae) 0.0226297
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0223142
VMP1 vacuole membrane protein 1 0.0221612
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0218344
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0212944
MBNL2 muscleblind-like splicing regulator 2 0.0212047
ERRFI1 ERBB receptor feedback inhibitor 1 0.0210816
PTMA prothymosin, alpha 0.0208417
NDRG1 N-myc downstream regulated 1 0.0205177
TXNRD1 thioredoxin reductase 1 0.0204198
CUX1 cut-like homeobox 1 0.0201937
SIK3 SIK family kinase 3 0.0197422
PLEC plectin 0.0195246
EEF2 eukaryotic translation elongation factor 2 0.0188813
EPS8 epidermal growth factor receptor pathway substrate 8 0.0187673
IER3 immediate early response 3 0.0185112
TFF1 trefoil factor 1 0.0184604
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0184276
PGM3 phosphoglucomutase 3 0.0184196
CDK13 cyclin-dependent kinase 13 0.0182406
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0180089
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0178105
NBR1 neighbor of BRCA1 gene 1 0.0177124
RAB1A RAB1A, member RAS oncogene family 0.0176107
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.0173009
UFM1 ubiquitin-fold modifier 1 0.0169999
BTBD9 BTB (POZ) domain containing 9 0.0169459
HELZ helicase with zinc finger 0.0169361
RCOR1 REST corepressor 1 0.0168298
SNX9 sorting nexin 9 0.0165065
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0165041
TBC1D22A TBC1 domain family, member 22A 0.0163143
NCEH1 neutral cholesterol ester hydrolase 1 0.0162004
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0161484
CLTC clathrin, heavy chain (Hc) 0.0159442
TPT1 tumor protein, translationally-controlled 1 0.0157916
NIBAN1 niban apoptosis regulator 1 0.0157099
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.0156644
PPIB peptidylprolyl isomerase B (cyclophilin B) 0.015404
TOM1L2 target of myb1-like 2 (chicken) 0.0153206
KDM6A lysine (K)-specific demethylase 6A 0.0152963
BRD2 bromodomain containing 2 0.0151041
SERINC3 serine incorporator 3 0.0150111
GTPBP2 GTP binding protein 2 0.0146995
MCL1 myeloid cell leukemia 1 0.0146196
MUC13 mucin 13, cell surface associated 0.014614
HBP1 HMG-box transcription factor 1 0.0145413
USP53 ubiquitin specific peptidase 53 0.0144959
MYO1E myosin IE 0.0143499
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0143096
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0142597
LIPH lipase, member H 0.014182
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0141786
TMED2 transmembrane emp24 domain trafficking protein 2 0.0140186
VEGFA vascular endothelial growth factor A 0.0140115
UGCG UDP-glucose ceramide glucosyltransferase 0.013935
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0139011
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0138618
TJP1 tight junction protein 1 0.0138516
NFE2L1 nuclear factor, erythroid 2-like 1 0.0137971
RPL31 ribosomal protein L31 0.013716
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0136173
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0136077
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0135995
GANAB glucosidase, alpha; neutral AB 0.0135211
N4BP2L2 NEDD4 binding protein 2-like 2 0.0134889
EIF4A2 eukaryotic translation initiation factor 4A2 0.0134856
MPZL3 myelin protein zero-like 3 0.0134363
PMM2 phosphomannomutase 2 0.0134263
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0133396
MYOF myoferlin 0.0133272
ZNF146 zinc finger protein 146 0.013208
SGMS2 sphingomyelin synthase 2 0.0131169
SMAD3 SMAD family member 3 0.01296
VIM vimentin 0.0127849
RRM2 ribonucleotide reductase M2 0.0124563

decreased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 -0.287192
NPSR1 neuropeptide S receptor 1 -0.178415
GMDS GDP-mannose 4,6-dehydratase -0.112498
TMSB10 thymosin beta 10 -0.102398
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.100956
MAML2 mastermind-like 2 (Drosophila) -0.0943206
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0658126
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.054137
KRT8 keratin 8, type II -0.0519575
CDK6 cyclin-dependent kinase 6 -0.0498365
H1-0 H1.0 linker histone -0.0495776
LOC112694756 uncharaterized LOC112694756 -0.0462351
KRT18 keratin 18, type I -0.0428768
S100A6 S100 calcium binding protein A6 -0.0409226
TMSB4X thymosin beta 4, X-linked -0.040645
EHBP1 EH domain binding protein 1 -0.040501
CEMIP cell migration inducing protein, hyaluronan binding -0.0398683
RPL23 ribosomal protein L23 -0.0395025
RPL26 ribosomal protein L26 -0.0394438
TNIK TRAF2 and NCK interacting kinase -0.0383002
ACTN4 actinin, alpha 4 -0.0380843
B2M beta-2-microglobulin -0.0378292
POTEF POTE ankyrin domain family, member F -0.0374538
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0363408
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0362516
RRBP1 ribosome binding protein 1 -0.0346823
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0345375
GPX2 glutathione peroxidase 2 -0.0339723
RUNX1 runt-related transcription factor 1 -0.0332504
PLSCR1 phospholipid scramblase 1 -0.0326286
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0325021
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0320653
RPL18 ribosomal protein L18 -0.0319355
PDIA4 protein disulfide isomerase family A, member 4 -0.0315238
RPS19 ribosomal protein S19 -0.0313798
GNAS GNAS complex locus -0.031084
RPL12 ribosomal protein L12 -0.0310391
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0307775
INSIG1 insulin induced gene 1 -0.0307554
AHNAK AHNAK nucleoprotein -0.0305087
FLNB filamin B, beta -0.0301207
ATF5 activating transcription factor 5 -0.0298441
AHR aryl hydrocarbon receptor -0.0295825
GARS1 glycyl-tRNA synthetase 1 -0.0292539
RPS21 ribosomal protein S21 -0.0291827
MBNL1 muscleblind-like splicing regulator 1 -0.0284307
TMEM123 transmembrane protein 123 -0.0282834
EPCAM epithelial cell adhesion molecule -0.0282223
MTUS1 microtubule associated tumor suppressor 1 -0.0280745
TRPS1 trichorhinophalangeal syndrome I -0.0273833
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0271409
PFN1 profilin 1 -0.0269798
HMGA1 high mobility group AT-hook 1 -0.0268349
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0268241
POF1B premature ovarian failure, 1B -0.0268104
NF1 neurofibromin 1 -0.0266331
SHROOM3 shroom family member 3 -0.0262575
S100A10 S100 calcium binding protein A10 -0.0262454
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0255628
COBL cordon-bleu WH2 repeat protein -0.0252767
PDIA3 protein disulfide isomerase family A, member 3 -0.0252425
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.025221
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0249825
CD2AP CD2-associated protein -0.0248553
CD46 CD46 molecule, complement regulatory protein -0.0241829
RAD51B RAD51 paralog B -0.0241113
PIAS1 protein inhibitor of activated STAT, 1 -0.0239757
AUTS2 autism susceptibility candidate 2 -0.0235177
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0233618
PRELID2 PRELI domain containing 2 -0.0232331
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0230422
PHF14 PHD finger protein 14 -0.0230234
RPL19 ribosomal protein L19 -0.0227748
ADD3 adducin 3 (gamma) -0.022586
GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 -0.0224997
DLG1 discs, large homolog 1 (Drosophila) -0.0223278
CBX3 chromobox homolog 3 -0.0221808
LY6E lymphocyte antigen 6 complex, locus E -0.0221492
ACTG1 actin gamma 1 -0.0220865
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0219083
ITGB4 integrin, beta 4 -0.0215433
KRT19 keratin 19, type I -0.0215416
RNF213 ring finger protein 213 -0.0215313
FRMD5 FERM domain containing 5 -0.0209308
ZC3H12B zinc finger CCCH-type containing 12B -0.0209102
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0206809
SAMD12 sterile alpha motif domain containing 12 -0.0206647
KMT2A lysine (K)-specific methyltransferase 2A -0.0205717
RPS24 ribosomal protein S24 -0.0204321
DEK DEK proto-oncogene -0.0203095
EIF1 eukaryotic translation initiation factor 1 -0.0203037
RPL34 ribosomal protein L34 -0.0202815
SKAP1 src kinase associated phosphoprotein 1 -0.0200336
PRRC2C proline-rich coiled-coil 2C -0.0200185
NFIA nuclear factor I/A -0.0200063
ACACA acetyl-CoA carboxylase alpha -0.0199389
RPL32 ribosomal protein L32 -0.0197742
OXR1 oxidation resistance 1 -0.0196261
IL1RAP interleukin 1 receptor accessory protein -0.0195847
IFI27 interferon, alpha-inducible protein 27 -0.0195747