ML264_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ML264 perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ML264_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.157992
MT2A metallothionein 2A 0.155308
MCL1 myeloid cell leukemia 1 0.141189
PDE4D phosphodiesterase 4D, cAMP-specific 0.139511
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.120063
TM4SF1 transmembrane 4 L six family member 1 0.115303
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.110839
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0828386
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0801119
ELL2 elongation factor, RNA polymerase II, 2 0.0796036
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0784679
ZSWIM6 zinc finger, SWIM-type containing 6 0.0769431
ASPH aspartate beta-hydroxylase 0.0767092
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0765298
THSD4 thrombospondin, type I, domain containing 4 0.075672
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0741064
WWOX WW domain containing oxidoreductase 0.071177
TFPI2 tissue factor pathway inhibitor 2 0.0703453
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0692545
SMOC1 SPARC related modular calcium binding 1 0.0660009
DOCK4 dedicator of cytokinesis 4 0.0621198
SAMD4A sterile alpha motif domain containing 4A 0.0611832
PM20D1 peptidase M20 domain containing 1 0.0610582
GLS2 glutaminase 2 (liver, mitochondrial) 0.0593346
SOD2 superoxide dismutase 2, mitochondrial 0.0590411
FAM107B family with sequence similarity 107, member B 0.0586432
PYGL phosphorylase, glycogen, liver 0.0558646
HSPA8 heat shock 70kDa protein 8 0.0544609
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0536993
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0513826
WAC WW domain containing adaptor with coiled-coil 0.0513071
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0506391
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0505267
RRM2 ribonucleotide reductase M2 0.0502684
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0487833
TPT1 tumor protein, translationally-controlled 1 0.0485968
MACF1 microtubule-actin crosslinking factor 1 0.0481761
IGFBP3 insulin-like growth factor binding protein 3 0.0472542
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0444419
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0443028
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.043492
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0428386
IER3 immediate early response 3 0.0417781
ZEB1 zinc finger E-box binding homeobox 1 0.0414948
APLP2 amyloid beta (A4) precursor-like protein 2 0.0414494
ATXN1 ataxin 1 0.0413617
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.04114
STC1 stanniocalcin 1 0.0403659
ZFAND3 zinc finger, AN1-type domain 3 0.0398566
BMP6 bone morphogenetic protein 6 0.0390541
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0384459
TPM3 tropomyosin 3 0.0378241
FUS FUS RNA binding protein 0.0376353
ARHGAP26 Rho GTPase activating protein 26 0.0369214
GRAMD1B GRAM domain containing 1B 0.0362986
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0360374
RCOR1 REST corepressor 1 0.0358376
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0356542
RPS8 ribosomal protein S8 0.0354305
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0348429
RAD51B RAD51 paralog B 0.0346332
SNX14 sorting nexin 14 0.0337128
DOCK5 dedicator of cytokinesis 5 0.0331939
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0331229
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.032553
ITGA6 integrin, alpha 6 0.0323209
CUL3 cullin 3 0.0321825
INTS6 integrator complex subunit 6 0.0317157
CTSL cathepsin L 0.031459
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0310487
SPRED2 sprouty-related, EVH1 domain containing 2 0.0301872
BRD2 bromodomain containing 2 0.0296071
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0295224
CALR calreticulin 0.0294736
MYH9 myosin, heavy chain 9, non-muscle 0.0290916
NUMB numb homolog (Drosophila) 0.029041
EIF4A2 eukaryotic translation initiation factor 4A2 0.0289815
FNDC3B fibronectin type III domain containing 3B 0.0285325
SFPQ splicing factor proline/glutamine-rich 0.028524
KIF5B kinesin family member 5B 0.0283072
RPS29 ribosomal protein S29 0.0283069
GOLGB1 golgin B1 0.0282403
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0279475
EPAS1 endothelial PAS domain protein 1 0.0279212
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0277614
NAP1L1 nucleosome assembly protein 1-like 1 0.0276497
CANX calnexin 0.0274053
CMIP c-Maf inducing protein 0.0268894
SERINC3 serine incorporator 3 0.0266971
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0261456
DST dystonin 0.0260734
PDIA3 protein disulfide isomerase family A, member 3 0.0260682
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0260439
ANKRD11 ankyrin repeat domain 11 0.0258742
RPS12 ribosomal protein S12 0.0257948
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0257901
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0256996
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0254995
MED13 mediator complex subunit 13 0.0253621
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0252856

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.188738
IGF2 insulin-like growth factor 2 -0.162044
TMSB10 thymosin beta 10 -0.121201
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0954789
HDAC9 histone deacetylase 9 -0.0797162
ERBIN erbb2 interacting protein -0.0714117
SLC38A2 solute carrier family 38, member 2 -0.0627303
VIM vimentin -0.0619705
FTL ferritin, light polypeptide -0.0607402
POTEF POTE ankyrin domain family, member F -0.0552578
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.050677
PFN1 profilin 1 -0.0502362
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0475961
S100A6 S100 calcium binding protein A6 -0.0465378
RHOA ras homolog family member A -0.0422332
BICC1 BicC family RNA binding protein 1 -0.0412227
RASAL2 RAS protein activator like 2 -0.0376119
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0372112
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0358918
ACACA acetyl-CoA carboxylase alpha -0.0351767
TPD52 tumor protein D52 -0.0343365
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0339647
ANKRD28 ankyrin repeat domain 28 -0.0333904
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0323863
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0321009
WDR43 WD repeat domain 43 -0.0319408
PAWR PRKC, apoptosis, WT1, regulator -0.0316443
CHN1 chimerin 1 -0.0313471
THBS1 thrombospondin 1 -0.0311799
FAM168A family with sequence similarity 168, member A -0.0305644
FGB fibrinogen beta chain -0.0303103
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0301529
ACTG1 actin gamma 1 -0.0300584
DENND4A DENN/MADD domain containing 4A -0.0300583
BHLHE40 basic helix-loop-helix family, member e40 -0.029658
UTRN utrophin -0.0295964
WBP11 WW domain binding protein 11 -0.0288493
IGFBP4 insulin-like growth factor binding protein 4 -0.028752
KMT2E lysine (K)-specific methyltransferase 2E -0.0286013
MBNL1 muscleblind-like splicing regulator 1 -0.0285976
USP3 ubiquitin specific peptidase 3 -0.0281829
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0281337
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.02799
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0276876
KLF6 Kruppel-like factor 6 -0.0270846
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0258184
HMGA1 high mobility group AT-hook 1 -0.0256172
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.0254862
EGFR epidermal growth factor receptor -0.0254367
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0253668
TMEM123 transmembrane protein 123 -0.0251518
CHD9 chromodomain helicase DNA binding protein 9 -0.0249115
SPIDR scaffolding protein involved in DNA repair -0.0249083
RPS21 ribosomal protein S21 -0.0247678
AHR aryl hydrocarbon receptor -0.0243794
NOLC1 nucleolar and coiled-body phosphoprotein 1 -0.0243431
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0243116
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0242785
RBM25 RNA binding motif protein 25 -0.0239983
OSBPL9 oxysterol binding protein-like 9 -0.0234934
EYA4 EYA transcriptional coactivator and phosphatase 4 -0.0234312
NAMPT nicotinamide phosphoribosyltransferase -0.0231465
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0227613
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0227558
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0226792
TBC1D19 TBC1 domain family, member 19 -0.0225459
TBC1D5 TBC1 domain family, member 5 -0.0223769
MYL12B myosin, light chain 12B, regulatory -0.0223506
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0223174
LAPTM4A lysosomal protein transmembrane 4 alpha -0.0221721
PTEN phosphatase and tensin homolog -0.0220885
BABAM2 BRISC and BRCA1 A complex member 2 -0.0219171
AK1 adenylate kinase 1 -0.0218343
ILF2 interleukin enhancer binding factor 2 -0.0218079
WIPF2 WAS/WASL interacting protein family, member 2 -0.0217796
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0215029
BASP1 brain abundant, membrane attached signal protein 1 -0.0214756
EFNA5 ephrin-A5 -0.02126
RHEB Ras homolog enriched in brain -0.0211054
PKM pyruvate kinase, muscle -0.0203469
CCNL1 cyclin L1 -0.0201088
MTF2 metal response element binding transcription factor 2 -0.0200612
PTK2 protein tyrosine kinase 2 -0.0199294
IST1 increased sodium tolerance 1 homolog (yeast) -0.0199095
RPL34 ribosomal protein L34 -0.0198969
SLC38A1 solute carrier family 38, member 1 -0.0198827
RPL32 ribosomal protein L32 -0.0197997
TES testin LIM domain protein -0.019567
BMPR1B bone morphogenetic protein receptor, type IB -0.019364
ARHGAP17 Rho GTPase activating protein 17 -0.0192762
SRRM1 serine/arginine repetitive matrix 1 -0.0191832
ECT2 epithelial cell transforming 2 -0.0191178
COG5 component of oligomeric golgi complex 5 -0.0191054
GNA13 guanine nucleotide binding protein (G protein), alpha 13 -0.0191037
RBM8A RNA binding motif protein 8A -0.0190867
RPL18 ribosomal protein L18 -0.0190341
WDR36 WD repeat domain 36 -0.0187743
RNF145 ring finger protein 145 -0.0187618
TAGLN2 transgelin 2 -0.0187484
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0187399