ML264_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ML264 perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ML264_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
BACE2 beta-site APP-cleaving enzyme 2 0.149932
IGF1R insulin-like growth factor 1 receptor 0.100927
RAD51B RAD51 paralog B 0.0907698
TENM3 teneurin transmembrane protein 3 0.0893549
SAMD4A sterile alpha motif domain containing 4A 0.082991
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0786522
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0778443
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0745722
MTUS1 microtubule associated tumor suppressor 1 0.0671874
PDE4D phosphodiesterase 4D, cAMP-specific 0.0667178
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0665495
PDE8A phosphodiesterase 8A 0.0659285
PLAUR plasminogen activator, urokinase receptor 0.0646643
SMOC1 SPARC related modular calcium binding 1 0.0642014
ATOSA atos homolog A 0.0640208
DSCAM Down syndrome cell adhesion molecule 0.0621979
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0596737
GRB10 growth factor receptor-bound protein 10 0.0593703
TBC1D5 TBC1 domain family, member 5 0.0587751
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0572223
ANTXR2 anthrax toxin receptor 2 0.0558886
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0555991
ERBB4 erb-b2 receptor tyrosine kinase 4 0.055376
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0547314
ZSWIM6 zinc finger, SWIM-type containing 6 0.053954
DSG2 desmoglein 2 0.0532373
ANO6 anoctamin 6 0.0532351
MTAP methylthioadenosine phosphorylase 0.0525407
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 0.0524007
TXNIP thioredoxin interacting protein 0.0523261
CDK13 cyclin-dependent kinase 13 0.0500503
ABHD17C abhydrolase domain containing 17C 0.0487866
PGK1 phosphoglycerate kinase 1 0.0486566
CMIP c-Maf inducing protein 0.0465652
MXD1 MAX dimerization protein 1 0.0457132
CELF2 CUGBP, Elav-like family member 2 0.0453669
BCAS3 breast carcinoma amplified sequence 3 0.0449756
IRF6 interferon regulatory factor 6 0.0447525
RUNX1 runt-related transcription factor 1 0.0439571
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0437418
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0432478
MYO1E myosin IE 0.0425331
ARRDC3 arrestin domain containing 3 0.0425315
TMCC3 transmembrane and coiled-coil domain family 3 0.0416143
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0410229
MIMS1 mitochondrial inner membrane scaffold 1 0.0408182
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0405107
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0402214
TUSC3 tumor suppressor candidate 3 0.0400448
DSPP dentin sialophosphoprotein 0.0398829
DENND1A DENN/MADD domain containing 1A 0.0398565
OGA O-GlcNAcase 0.0397806
CERT1 ceramide transporter 1 0.0396766
CREBRF CREB3 regulatory factor 0.0389347
PUM2 pumilio RNA-binding family member 2 0.0389061
DUSP10 dual specificity phosphatase 10 0.038383
FNDC3A fibronectin type III domain containing 3A 0.0383729
TUT4 terminal uridylyl transferase 4 0.0382774
CDK14 cyclin-dependent kinase 14 0.0382613
FOXO3 forkhead box O3 0.0379569
ARHGAP5 Rho GTPase activating protein 5 0.037314
RYBP RING1 and YY1 binding protein 0.0372216
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0369195
ITPKC inositol-trisphosphate 3-kinase C 0.0364662
PRKG1 protein kinase, cGMP-dependent, type I 0.036403
TPRG1 tumor protein p63 regulated 1 0.0363248
NKD1 naked cuticle homolog 1 (Drosophila) 0.0358881
NEBL nebulette 0.0355177
LOC112694756 uncharaterized LOC112694756 0.0354895
CDK19 cyclin-dependent kinase 19 0.0348572
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0348316
MACF1 microtubule-actin crosslinking factor 1 0.0347686
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0344
BPTF bromodomain PHD finger transcription factor 0.0341291
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0338434
PDLIM5 PDZ and LIM domain 5 0.0335319
CDYL chromodomain protein, Y-like 0.0332713
FAT1 FAT atypical cadherin 1 0.0330428
MAML3 mastermind-like 3 (Drosophila) 0.0328655
PCGF5 polycomb group ring finger 5 0.0328536
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0328031
PLS3 plastin 3 0.0326964
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0326418
STOX2 storkhead box 2 0.032611
NCKAP1 NCK-associated protein 1 0.0325986
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.032362
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0322996
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0321524
OASL 2'-5'-oligoadenylate synthetase-like 0.031981
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0319777
GTDC1 glycosyltransferase-like domain containing 1 0.0319652
FBXL17 F-box and leucine-rich repeat protein 17 0.0318635
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0316729
SND1 staphylococcal nuclease and tudor domain containing 1 0.0312701
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0310397
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0309841
CUL4A cullin 4A 0.0308388
EPS8 epidermal growth factor receptor pathway substrate 8 0.0308353
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0307835
CALR calreticulin 0.0306898

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.124778
VIM vimentin -0.103274
KRT17 keratin 17, type I -0.0987509
TMSB10 thymosin beta 10 -0.0971356
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0946344
STC1 stanniocalcin 1 -0.0935119
LMO7 LIM domain 7 -0.0903257
FNDC3B fibronectin type III domain containing 3B -0.0893716
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0802214
PTMA prothymosin, alpha -0.0760497
RPS6 ribosomal protein S6 -0.0758369
AKAP12 A kinase (PRKA) anchor protein 12 -0.0757248
SPAG9 sperm associated antigen 9 -0.0707201
MORF4L2 mortality factor 4 like 2 -0.0700402
FN1 fibronectin 1 -0.0672689
LSAMP limbic system-associated membrane protein -0.0606928
CHD1 chromodomain helicase DNA binding protein 1 -0.0585856
F3 coagulation factor III (thromboplastin, tissue factor) -0.0563218
EGR1 early growth response 1 -0.0562748
GOLGA4 golgin A4 -0.0555211
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0551002
PARD3 par-3 family cell polarity regulator -0.0549477
POTEF POTE ankyrin domain family, member F -0.054895
TPM4 tropomyosin 4 -0.0547881
FTL ferritin, light polypeptide -0.054157
TJP1 tight junction protein 1 -0.053289
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0528132
ASPH aspartate beta-hydroxylase -0.0521215
GPC6 glypican 6 -0.051948
TRIO trio Rho guanine nucleotide exchange factor -0.0505681
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0500039
RPS16 ribosomal protein S16 -0.0466324
S100A9 S100 calcium binding protein A9 -0.0461435
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0460908
PDE10A phosphodiesterase 10A -0.0460269
MT2A metallothionein 2A -0.0453878
PRRC2C proline-rich coiled-coil 2C -0.0439265
RPL31 ribosomal protein L31 -0.0434719
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0434061
INHBA inhibin, beta A -0.0433676
SOD2 superoxide dismutase 2, mitochondrial -0.0432598
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0426632
MUC16 mucin 16, cell surface associated -0.0426563
EGFR epidermal growth factor receptor -0.0424081
ANXA2 annexin A2 -0.0423824
TTC17 tetratricopeptide repeat domain 17 -0.0414681
DLG1 discs, large homolog 1 (Drosophila) -0.0410018
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0405526
RPL12 ribosomal protein L12 -0.0400418
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.039855
RPL35A ribosomal protein L35a -0.0379767
FOXP1 forkhead box P1 -0.037922
NAMPT nicotinamide phosphoribosyltransferase -0.0377861
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0376673
ZMYM2 zinc finger, MYM-type 2 -0.037539
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0374827
RNF145 ring finger protein 145 -0.0374253
MAP7 microtubule-associated protein 7 -0.0374042
NALF1 NALCN channel auxiliary factor 1 -0.0371797
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0371484
TM9SF3 transmembrane 9 superfamily member 3 -0.0367761
GSK3B glycogen synthase kinase 3 beta -0.0363312
PTBP3 polypyrimidine tract binding protein 3 -0.0360343
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.035981
BRWD1 bromodomain and WD repeat domain containing 1 -0.0355227
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.03539
ENO1 enolase 1, (alpha) -0.0353276
COL6A3 collagen, type VI, alpha 3 -0.0351491
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0349277
ZBTB20 zinc finger and BTB domain containing 20 -0.0345436
TXNRD1 thioredoxin reductase 1 -0.0340864
LCORL ligand dependent nuclear receptor corepressor-like -0.0339894
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0338896
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0338271
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0336972
EXT1 exostosin glycosyltransferase 1 -0.0336114
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0329342
NDRG1 N-myc downstream regulated 1 -0.0327748
AKAP13 A kinase (PRKA) anchor protein 13 -0.0323207
ARF4 ADP-ribosylation factor 4 -0.0323056
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0323017
KTN1 kinectin 1 (kinesin receptor) -0.0322639
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0322301
SBNO1 strawberry notch homolog 1 (Drosophila) -0.0322186
CYRIB CYFIP related Rac1 interactor B -0.0321608
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0320635
UGCG UDP-glucose ceramide glucosyltransferase -0.0320563
CCDC88A coiled-coil domain containing 88A -0.0319671
GNAS GNAS complex locus -0.0318779
MED13 mediator complex subunit 13 -0.0316338
GATAD2B GATA zinc finger domain containing 2B -0.0316095
MSN moesin -0.0315453
SQSTM1 sequestosome 1 -0.0314476
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0313608
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0308277
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0305227
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0303206
CAMTA1 calmodulin binding transcription activator 1 -0.0301801
RORA RAR-related orphan receptor A -0.0299851
RPL19 ribosomal protein L19 -0.0298324