ML264_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ML264 perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ML264_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CENPF centromere protein F, 350/400kDa 0.108203
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.10358
MKI67 marker of proliferation Ki-67 0.0912632
TPT1 tumor protein, translationally-controlled 1 0.0908258
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0855644
RPS8 ribosomal protein S8 0.0849371
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0841101
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0769097
COL3A1 collagen, type III, alpha 1 0.0759873
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0748486
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0673437
PCLO piccolo presynaptic cytomatrix protein 0.0649956
RPS6 ribosomal protein S6 0.0639288
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0623165
COL11A1 collagen, type XI, alpha 1 0.0622749
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0599034
AKAP9 A kinase (PRKA) anchor protein 9 0.0571175
EIF1 eukaryotic translation initiation factor 1 0.0564502
CENPE centromere protein E, 312kDa 0.0535998
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0520336
ERBB4 erb-b2 receptor tyrosine kinase 4 0.04993
WSB1 WD repeat and SOCS box containing 1 0.0487177
PDE4D phosphodiesterase 4D, cAMP-specific 0.0461411
CKAP2 cytoskeleton associated protein 2 0.0453701
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0449279
COL5A2 collagen, type V, alpha 2 0.0444205
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0444085
PCDH9 protocadherin 9 0.0443377
DST dystonin 0.043929
KDM3A lysine (K)-specific demethylase 3A 0.0429689
TTC3 tetratricopeptide repeat domain 3 0.0429549
ANXA1 annexin A1 0.0427611
CDH19 cadherin 19, type 2 0.0426482
FOXP2 forkhead box P2 0.0424485
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0422586
RPLP0 ribosomal protein, large, P0 0.0421782
EXT1 exostosin glycosyltransferase 1 0.0409321
RPS12 ribosomal protein S12 0.0404216
VIM vimentin 0.0392153
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0385379
JMJD1C jumonji domain containing 1C 0.038261
COL1A2 collagen, type I, alpha 2 0.0380064
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0366078
GANAB glucosidase, alpha; neutral AB 0.0364414
MCL1 myeloid cell leukemia 1 0.0360973
RPL37 ribosomal protein L37 0.0359434
ENO1 enolase 1, (alpha) 0.0350846
CCNA2 cyclin A2 0.0347453
ATP5F1B ATP synthase F1 subunit beta 0.0346915
BIRC6 baculoviral IAP repeat containing 6 0.0343719
DUSP6 dual specificity phosphatase 6 0.0337761
NFIA nuclear factor I/A 0.0335019
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0331485
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0329184
GPC6 glypican 6 0.0317645
PGK1 phosphoglycerate kinase 1 0.0314411
SGO2 shugoshin 2 0.0314386
TPR translocated promoter region, nuclear basket protein 0.0311603
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.031022
ADAR adenosine deaminase, RNA-specific 0.0310003
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0307223
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0302162
TEX11 testis expressed 11 0.0300831
NIPBL Nipped-B homolog (Drosophila) 0.0300766
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0297934
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0297877
KPNB1 karyopherin (importin) beta 1 0.0297127
ARL15 ADP-ribosylation factor-like 15 0.0291671
SERBP1 SERPINE1 mRNA binding protein 1 0.0291549
PDGFC platelet derived growth factor C 0.0291171
CLTC clathrin, heavy chain (Hc) 0.0288826
EIF3E eukaryotic translation initiation factor 3, subunit E 0.028819
ZNF609 zinc finger protein 609 0.0288119
NASP nuclear autoantigenic sperm protein (histone-binding) 0.0287533
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0285014
TAS2R14 taste receptor, type 2, member 14 0.0284827
RAD21 RAD21 homolog (S. pombe) 0.0284574
SMC4 structural maintenance of chromosomes 4 0.0282511
RPL35A ribosomal protein L35a 0.0281364
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.028053
ACTG1 actin gamma 1 0.0279136
RPL26 ribosomal protein L26 0.0279092
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0278
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0277891
DOCK5 dedicator of cytokinesis 5 0.0277835
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0277247
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0277044
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.027618
B2M beta-2-microglobulin 0.0275622
UBA2 ubiquitin-like modifier activating enzyme 2 0.0275589
ASPH aspartate beta-hydroxylase 0.0273554
UTRN utrophin 0.0272445
RPS2 ribosomal protein S2 0.0271123
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.027063
ANKHD1 ankyrin repeat and KH domain containing 1 0.0270232
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0269912
CALR calreticulin 0.0269582
MYO9A myosin IXA 0.0269008
RPL7 ribosomal protein L7 0.0262771
SCAF11 SR-related CTD-associated factor 11 0.0260071

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.27229
TMSB10 thymosin beta 10 -0.134807
ZFAND3 zinc finger, AN1-type domain 3 -0.100218
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0976085
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0954772
POTEF POTE ankyrin domain family, member F -0.0763744
TSC22D2 TSC22 domain family, member 2 -0.0637865
NTM neurotrimin -0.0632229
FNDC3B fibronectin type III domain containing 3B -0.0596912
UBC ubiquitin C -0.0589965
PLPP1 phospholipid phosphatase 1 -0.0551326
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0546993
HDAC9 histone deacetylase 9 -0.053504
PGAP1 post-GPI attachment to proteins 1 -0.0524081
TRIO trio Rho guanine nucleotide exchange factor -0.050545
LRRC4C leucine rich repeat containing 4C -0.0503698
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0499856
MEIS2 Meis homeobox 2 -0.0470048
PRR16 proline rich 16 -0.0466945
GNAS GNAS complex locus -0.0448927
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0447945
RHEB Ras homolog enriched in brain -0.0445151
SRPK2 SRSF protein kinase 2 -0.0435315
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0422621
ACTN4 actinin, alpha 4 -0.0410544
THBS1 thrombospondin 1 -0.0409424
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0402751
YAP1 Yes-associated protein 1 -0.0378111
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0377356
RTN4 reticulon 4 -0.0377049
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0371992
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 -0.0355343
MRPS30 mitochondrial ribosomal protein S30 -0.0353192
MRPS6 mitochondrial ribosomal protein S6 -0.0351403
SAMD4A sterile alpha motif domain containing 4A -0.0347949
OSBPL10 oxysterol binding protein-like 10 -0.0341454
EMP1 epithelial membrane protein 1 -0.0338156
SET SET nuclear proto-oncogene -0.0334555
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 -0.0332256
LOC112694756 uncharaterized LOC112694756 -0.0331751
BMPR1A bone morphogenetic protein receptor, type IA -0.0329577
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0321372
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0321036
S100A10 S100 calcium binding protein A10 -0.031286
NXN nucleoredoxin -0.0309394
SHROOM3 shroom family member 3 -0.0307009
HMGA1 high mobility group AT-hook 1 -0.0302732
SRRM2 serine/arginine repetitive matrix 2 -0.029737
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.029718
STRN3 striatin, calmodulin binding protein 3 -0.0296599
NOP58 NOP58 ribonucleoprotein -0.029659
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0295452
MEF2A myocyte enhancer factor 2A -0.0293462
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.029241
ANKRD33B ankyrin repeat domain 33B -0.0281721
CD2AP CD2-associated protein -0.0279628
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0277312
CAPNS1 calpain, small subunit 1 -0.0276278
MPG N-methylpurine-DNA glycosylase -0.0274068
RCOR1 REST corepressor 1 -0.0272818
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0270735
USP3 ubiquitin specific peptidase 3 -0.0269923
GAB2 GRB2-associated binding protein 2 -0.0269201
VGLL3 vestigial-like family member 3 -0.026777
TIPARP TCDD-inducible poly(ADP-ribose) polymerase -0.0264925
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0261648
GJD3 gap junction protein, delta 3, 31.9kDa -0.0259369
NRG1 neuregulin 1 -0.0259161
RNF145 ring finger protein 145 -0.0257624
FXR1 fragile X mental retardation, autosomal homolog 1 -0.025687
ADGRL3 adhesion G protein-coupled receptor L3 -0.0256025
POU2F1 POU class 2 homeobox 1 -0.0250979
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0250795
NPR2 natriuretic peptide receptor 2 -0.0247958
KCTD16 potassium channel tetramerization domain containing 16 -0.0246572
MTCL1 microtubule crosslinking factor 1 -0.0246351
IGF1R insulin-like growth factor 1 receptor -0.0246229
ZNF207 zinc finger protein 207 -0.0245759
MAML2 mastermind-like 2 (Drosophila) -0.0243491
FBXO27 F-box protein 27 -0.0243415
MMP1 matrix metallopeptidase 1 -0.0240386
COTL1 coactosin-like F-actin binding protein 1 -0.0238339
ZC3H12B zinc finger CCCH-type containing 12B -0.0236929
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0232787
ITGAV integrin, alpha V -0.0232716
EP300 E1A binding protein p300 -0.0232451
HYCC2 hyccin PI4KA lipid kinase complex subunit 2 -0.0232208
MEMO1 mediator of cell motility 1 -0.0230372
PFN1 profilin 1 -0.0229343
DMD dystrophin -0.0228232
WDR43 WD repeat domain 43 -0.0224468
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) -0.0221453
PUM2 pumilio RNA-binding family member 2 -0.0221208
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0220568
ZFC3H1 zinc finger, C3H1-type containing -0.0220031
RAI1 retinoic acid induced 1 -0.0218113
FLNA filamin A, alpha -0.0216939
CSDE1 cold shock domain containing E1, RNA-binding -0.0213901
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0211523
CSMD3 CUB and Sushi multiple domains 3 -0.0211452